Identification and characterization of high variable regions in hepatitis B virus genome of adr and adw serotypes

World Chinese Journal of Digestology

Volumn 12, Issue 1, 2004, Pages 42-46

  Dong, Jing ^a   Cheng, Jun ^a   Yang, Qian ^a  

^a BEIJING 302 HOSPITAL   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; GENETIC VARIABILITY; HEPATITIS B VIRUS; LIVER CELL CARCINOMA; NONHUMAN; NUCLEOTIDE SEQUENCE; SEQUENCE HOMOLOGY; SEROTYPE; VIRUS GENOME; VIRUS STRAIN;

EID: 1542350347     PISSN: 10093079     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (50)

1. Galibert F, Mandart E, Fitoussi F, Tiollais P, Charnay P. Nucleotide sequence of the hepatitis B virus genome (subtype ayw) cloned in E. coli. Nature 1979;281:646-650
2. Charnay P, Mandart E, Hampe A, Fitoussi F, Tiollais P, Galibert F. Localization on the viral genome and nucleotide sequence of the gene coding for the two major polypeptides of the hepatitis B surface antigen (HBsAg). Nucleic Acids Res 1979;7:335-346
3. Dejean A, Sonigo P, Wain-Hobson S, Tiollais P. Specific hepatitis B virus integration in hepatocellular carcinoma DNA through a viral 11-base-pair direct repeat. Proc Natl Acad Sci USA 1984;81:5350-5354
4. Schaller H, Fischer M. Transcriptional control of hepadnavirus gene expression. Curr Top Microbiol Immunol 1991;168:21-39
5. Seifer M, Heermann KH, Gerlich WH. Expression pattern of the hepatitis B virus genome in transfected mouse fibroblasts. Virology 1990;179:287-299
6. Blum HE. Hepatitis B virus: significance of naturally occurring mutants. Intervirology 1993;35:40-50
7. Carman W, Thomas H, Domingo E. Viral genetic variation: hepatitis B virus as a clinical example. Lancet 1993;341:349-353
8. Sakamoto N, Enomoto N, Kurosaki M, Marumo F, Sato C. Sequential change of the hypervariable region of the hepatitis C virus genome in acute infection. J Med Virol 1994;42:103-108
9. Haigwood NL, Shuster JR, Moore GK, Lee H, Skiles PV, Higgins KW, Barr PJ, George-Nascimento C, Steimer KS. Importance of hypervariable regions of HIV-1 gp120 in the generation of virus neutralizing antibodies. AIDS Res Hum Ret 1990;6:855-869
10. Simmonds P, Balfe P, Ludlam CA, Bishop JO, Brown AJ. Analysis of sequence diversity in hypervariable regions of the external glycoprotein of human immunodeficiency virus type 1. J Virol 1990;64:5840-5850
11. Gunther S, Li BC, Miska S, Kruger DH, Meisel H, Will H. A novel method for efficient amplification of whole hepatitis B virus genomes permits rapid functional analysis and reveals deletion mutants in immunosuppressed patients. J Virol 1995;69:5437-5444
12. Mukaide M, Kumazawa T, Hoshi A, Kawaguchi R, Hikiji K. The complete nucleotide sequence of hepatitis B virus, subtype adr (SRADR) and phylogenetic analysis. Nucleic Acids Res 1992;20:6105
13. Kobayashi M, Koike K. Complete nucleotide sequence of hepatitis B virus DNA of subtype adr and its conserved gene organization. Gene 1984;30:227-232
14. Okamoto H, Tsuda F, Sakugawa H, Sastrosoewignjo RI, Imai M, Miyakawa Y, Mayumi M. Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes. J Gen Virol 1988;69(Pt 10):2575-2583
15. Sugauchi F, Mizokami M, Orito E, Ohno T, Hayashi K, Kato T, Tanaka Y, Kato H, Ueda R. Molecular evolutionary analysis of the complete nucleotide sequence of hepatitis B virus (HBV) in a case of HBV infection acquired through a needlestick accident. Clin Infect Dis 2000;31:1195-1201
16. Rokuhara A, Tanaka E, Yagi S, Mizokami M, Hashikura Y, Kawasaki S, Kiyosawa K. De novo infection of hepatitis B virus in patients with orthotopic liver transplantation: analysis by determining complete sequence of the genome. J Med Virol 2000;62:471-478
17. Okamoto H, Imai M, Kametani M, Nakamura T, Mayumi M. Genomic heterogeneity of hepatitis B virus in a 54-year-old woman who contracted the infection through materno-fetal transmission. Jpn J Exp Med 1987;57:231-236
18. Estacio RC, Chavez CC, Okamoto H, Lingao AL, Reyes MT, Domingo E, Mayumi M. Nucleotide sequence of a hepatitis B virus genome of subtype adw isolated from a Philippino: Comparison with the reported three genomes of the same subtype. J Gastroenterol Hepatol 1988;3:215-222
19. Dong J, Cheng J, Wang QH, Liu Y, Wang G, Shi SS, Xia XB, Shao Q, Si CW. The preliminary study on hepatitis B virus (HBV) quasispecies in patients with chronic HBV infection. Chin J Infect Dis 2001;19:199-203
20. Kann M, Gerlich C. Chapter 7: Structure and Molecular Virology. Viral Hepatitis (Eds Zuckrman AJ, et al.), 2nd edition, Harcourt Publishers Limited, 1998:77-106
21. Loncarevic IF, Zentgraf H, Schroder CH. Sequence of a replication competent hepatitis B virus genome with a preX open reading frame. Nucleic Acids Res 1990;18:4940
22. Takahashi K, Kishimoto S, Ohori K, Yoshizawa H, Akahane Y, Okamoto H, Mishiro S. A unique set of mutations in the "preX" region of hepatitis B virus DNA frequently found in patients but not in asymptomatic carriers: implication for a novel variant. Int Hepatol Commun 1995;3:131-138
23. Takahashi K, Akahane Y, Hino K, Ohta Y, Mishiro S. Hepatitis B virus genomic sequence in the circulation of hepatocellular carcinoma patients: comparative analysis of 40 full-length isolates. Arch Virol 1998;143:2313-2326
24. Lauer U, Weiss L, Hofschneider PH, Kekule AS. The hepatitis B virus pre-S/S(t) transactivator is generated by 3′ truncations within a defined region of the S gene. J Virol 1992;66:5284-5289
25. Hildt E, Hofschneider PH. The PreS2 activators of the hepatitis B virus: activators of tumour promoter pathways. Recent Results Cancer Res 1998;154:315-329
26. Hildt E, Saher G, Bruss V, Hofschneider PH. The hepatitis B virus large surface protein (LHBs) is a transcriptional activator. Virology 1996;225:235-239