-
1
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
-
Brazma, A., P. Hingamp, J. Quackenbush, G. Sherlock, P. Spellman, C. Stoeckert, J. Aach, W. Ansorge, et al. 2001. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat. Genet. 29:365-371.
-
(2001)
Nat. Genet.
, vol.29
, pp. 365-371
-
-
Brazma, A.1
Hingamp, P.2
Quackenbush, J.3
Sherlock, G.4
Spellman, P.5
Stoeckert, C.6
Aach, J.7
Ansorge, W.8
-
2
-
-
0037246058
-
ArrayExpress - Public repository for microarray gene expression data at the EBI
-
Brazma, A., H. Parkinson, U. Sarkans, M. Shojatalab, J. Vilo, N. Abeygunawardena, E. Holloway, M. Kapushesky, et al. 2003. ArrayExpress-public repository for microarray gene expression data at the EBI. Nucleic Acids Res. 31:68-71.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 68-71
-
-
Brazma, A.1
Parkinson, H.2
Sarkans, U.3
Shojatalab, M.4
Vilo, J.5
Abeygunawardena, N.6
Holloway, E.7
Kapushesky, M.8
-
3
-
-
0642340504
-
The Longhorn Array Database (LAD): An open-source. MIAME compliant implementation of the Stanford Microarray Database (SMD)
-
Killion, P.J., G. Sherlock, and V.R. Iyer. 2003. The Longhorn Array Database (LAD): an open-source, MIAME compliant implementation of the Stanford Microarray Database (SMD). BMC Bioinformatics 4:32.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 32
-
-
Killion, P.J.1
Sherlock, G.2
Iyer, V.R.3
-
5
-
-
12244298154
-
Statistical analysis of high-density oligonucleotide arrays: A multiplicative noise model
-
Sasik, R., E. Calvo, and J. Corbeil. 2002. Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model. Bioinformatics 18:1633-1640.
-
(2002)
Bioinformatics
, vol.18
, pp. 1633-1640
-
-
Sasik, R.1
Calvo, E.2
Corbeil, J.3
-
6
-
-
0346706335
-
Modeling gene expression measurement error: A quasi-likelihood approach
-
Strimmer, K. 2003. Modeling gene expression measurement error: a quasi-likelihood approach. BMC Bioinformatics 4:10.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 10
-
-
Strimmer, K.1
-
7
-
-
0036679427
-
A conditional density error model for the statistical analysis of microarray data
-
Love, B., D.R. Rank, S.G. Penn, D.A. Jenkins, and R.S. Thomas. 2002. A conditional density error model for the statistical analysis of microarray data. Bioinformatics 18:1064-1072.
-
(2002)
Bioinformatics
, vol.18
, pp. 1064-1072
-
-
Love, B.1
Rank, D.R.2
Penn, S.G.3
Jenkins, D.A.4
Thomas, R.S.5
-
8
-
-
1542264346
-
DNA microarrays and the core facility
-
G. Hardiman (Ed.), DNA Press LLC, Eagleville, PA
-
Rouse, R., K. Verdun, and G. Hardiman. 2003. DNA microarrays and the core facility, p. 37-66. In G. Hardiman (Ed.), Microarray Methods and Applications: Nuts & Bolts, DNA Press LLC, Eagleville, PA.
-
(2003)
Microarray Methods and Applications: Nuts & Bolts
, pp. 37-66
-
-
Rouse, R.1
Verdun, K.2
Hardiman, G.3
-
9
-
-
0034625797
-
A novel, sensitive detection system for high-density microarray using dendrimer technology
-
Stears, R.L., R.C. Getts, and S.R. Gullans. 2000. A novel, sensitive detection system for high-density microarray using dendrimer technology. Physiol. Genomics 3:93-99.
-
(2000)
Physiol. Genomics
, vol.3
, pp. 93-99
-
-
Stears, R.L.1
Getts, R.C.2
Gullans, S.R.3
-
10
-
-
0035022378
-
A relational schema for both array-based and SAGE gene expression experiments
-
Stoeckert, C., A. Pizarro, E. Manduchi, M. Gibson, B. Brunk, J. Crabtree, J. Schug, S. Shen-Orr, and G.C. Overton. 2001. A relational schema for both array-based and SAGE gene expression experiments. Bioinformatics 17:300-308.
-
(2001)
Bioinformatics
, vol.17
, pp. 300-308
-
-
Stoeckert, C.1
Pizarro, A.2
Manduchi, E.3
Gibson, M.4
Brunk, B.5
Crabtree, J.6
Schug, J.7
Shen-Orr, S.8
Overton, G.C.9
-
11
-
-
0036545952
-
An assessment of Motorola CodeLink™ microarray performance for gene expression profiling applications
-
Ramakrishnan, R., D. Dorris, A. Lublinsky, A. Nguyen, M. Domanus, A. Prokhorova, L. Gieser, E. Touma, et al. 2002. An assessment of Motorola CodeLink™ microarray performance for gene expression profiling applications. Nucleic Acids Res. 30:E30.
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Ramakrishnan, R.1
Dorris, D.2
Lublinsky, A.3
Nguyen, A.4
Domanus, M.5
Prokhorova, A.6
Gieser, L.7
Touma, E.8
-
12
-
-
0035145527
-
Quantitative assessment of DNA microarrays-comparison with Northern blot analyses
-
Taniguchi, M., K. Miura, H. Iwao, and S. Yamanaka. 2001. Quantitative assessment of DNA microarrays-comparison with Northern blot analyses. Genomics 71:34-39.
-
(2001)
Genomics
, vol.71
, pp. 34-39
-
-
Taniguchi, M.1
Miura, K.2
Iwao, H.3
Yamanaka, S.4
-
13
-
-
0141905890
-
Evaluation 4f gene expression measurements from commercial microarray platforms
-
Tan, P.K., T.J. Downey, E.L. Spitznagel, Jr., P. Xu, D. Fu, D.S. Dimitrov, R.A. Lempicki, B.M. Raaka, and M.C. Cam. 2003. Evaluation 4f gene expression measurements from commercial microarray platforms. Nucleic Acids Res. 31:5676-5684.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 5676-5684
-
-
Tan, P.K.1
Downey, T.J.2
Spitznagel Jr., E.L.3
Xu, P.4
Fu, D.5
Dimitrov, D.S.6
Lempicki, R.A.7
Raaka, B.M.8
Cam, M.C.9
-
14
-
-
0037188477
-
Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range
-
Dudley, A.M., J. Aach, M.A. Steffen, and G.M. Church. 2002. Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range. Proc. Natl. Acad. Sci. USA 99:7554-7559.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7554-7559
-
-
Dudley, A.M.1
Aach, J.2
Steffen, M.A.3
Church, G.M.4
-
15
-
-
0037095769
-
AccuraCy and calibration of commercial oligonucleotide and custom cDNA microarrays
-
Yuen, T., E. Wurmbach, R.L. Pfeffer, B.J. Ebersole, and S.C. Sealfon. 2002. AccuraCy and calibration of commercial oligonucleotide and custom cDNA microarrays. Nucleic Acids Res. 30:E48.
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Yuen, T.1
Wurmbach, E.2
Pfeffer, R.L.3
Ebersole, B.J.4
Sealfon, S.C.5
-
16
-
-
0036296240
-
Multiplex standardized RT-PCR for expression analysis of many genes in small samples
-
Crawford, E.L., K.A. Warner, S.A. Khuder, R.J. Zahorchak, and J.C. Willey. 2002. Multiplex standardized RT-PCR for expression analysis of many genes in small samples. Bio. chem. Biophys. Res. Commun. 293:509-516.
-
(2002)
Bio. Chem. Biophys. Res. Commun.
, vol.293
, pp. 509-516
-
-
Crawford, E.L.1
Warner, K.A.2
Khuder, S.A.3
Zahorchak, R.J.4
Willey, J.C.5
-
17
-
-
0036752147
-
Comparison of fluorescent tag DNA labeling methods used for expression analysis by DNA microarrays
-
Richter, A., C. Schwager, S. Hentze, W. Ansorge, M.W. Hentze, and M. Muckentha. ler. 2002. Comparison of fluorescent tag DNA labeling methods used for expression analysis by DNA microarrays. BioTechniques 33:620-630.
-
(2002)
BioTechniques
, vol.33
, pp. 620-630
-
-
Richter, A.1
Schwager, C.2
Hentze, S.3
Ansorge, W.4
Hentze, M.W.5
Muckenthaler, M.6
-
18
-
-
0036898577
-
Microarray data normalization and transformation
-
Quackenbush, J. 2002. Microarray data normalization and transformation. Nat. Genet. 32(Suppl):496-501.
-
(2002)
Nat. Genet.
, vol.32
, Issue.SUPPL.
, pp. 496-501
-
-
Quackenbush, J.1
-
19
-
-
0031246430
-
Ratio-based decisions and the quantitative analysis of cDNA microarray images
-
Chen, Y., E.R. Dougherty, and M.L. Bittner. 1997. Ratio-based decisions and the quantitative analysis of cDNA microarray images. J. Biomed. Optics 2:364-374.
-
(1997)
J. Biomed. Optics
, vol.2
, pp. 364-374
-
-
Chen, Y.1
Dougherty, E.R.2
Bittner, M.L.3
-
20
-
-
0035875553
-
Issues in cDNA microarray analysis: Quality filtering, channel normalization, models of variations and assessment of gene effects
-
Tseng, G.C., M.K. Oh, L. Rohlin, J.C. Liao, and W.H. Wong. 2001. Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects. Nucleic Acids Res. 29:2549-2557.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2549-2557
-
-
Tseng, G.C.1
Oh, M.K.2
Rohlin, L.3
Liao, J.C.4
Wong, W.H.5
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