Quality control for SELDI analysis

Clinical Chemistry and Laboratory Medicine

Volumn 43, Issue 2, 2005, Pages 125-126

  White, C Nicole ^a   Zhang, Zhen ^a   Chan, Daniel W ^a  

^a DEPARTMENT OF PATHOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MARKER;

ANALYTICAL PARAMETERS; AUTOMATION; CLINICAL RESEARCH; CLUSTER ANALYSIS; DIAGNOSTIC PROCEDURE; EDITORIAL; FREEZING; PRIORITY JOURNAL; PROTEOMICS; QUALITY CONTROL; SENSITIVITY AND SPECIFICITY; STANDARDIZATION; STATISTICAL ANALYSIS; SURFACE ENHANCED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; THAWING;

DIAGNOSIS; PROTEOMICS; QUALITY CONTROL; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; STATISTICS;

EID: 14944373183     PISSN: 14346621     EISSN: None     Source Type: Journal    
DOI: 10.1515/CCLM.2005.020     Document Type: Editorial

References (8)

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2. Qu Y, Adam BL, Yasui Y, Ward MD, Cazares LH, Schellhammer PF, et al. Boosted decision tree analysis of surface-enhanced laser desorption/ionization mass spectral serum profiles discriminates prostate cancer from non-cancer patients. Clin Chem 2002;48:1835-43.
3. Petricoin EF, Ardekani AM, Hitt BA, Levine PJ, Fusaro VA, Steinberg SM, et al. Use of proteomic patterns in serum to identify ovarian cancer. Lancet 2002;359:572-7.
4. Baggerly KA, Morris JS, Coombes KR. Reproducibility of SELDI-TOF protein patterns in serum: comparing datasets from different experiments. Bioinformatics 2004; 20:777-85.
5. Aivado M, Spentzos D, Alterovitz G, Otu HH, Grall F, Giagounidis AA, et al. Optimization and evaluation of surface-enhanced laser desorption/ionization time-of-flight mass spectrometry (SELDI-TOF MS) with reversed phase protein arrays for protein profiling. Clin Chem Lab Med 2005;43:133-40.
6. Cordingley HC, Roberts SL, Tooke P, Armitage JR, Lane PW, Wu W, Wildsmith SE. Multifactorial screening design and analysis of SELDI-TOF ProteinChip array optimization experiments. Biotechniques 2003;34:364-5, 8-73.
7. Coombes KR, Fritsche HA Jr, Clarke C, Chen JN, Baggerly KA, Morris JS, et al. Quality control and peak finding for proteomics data collected from nipple aspirate fluid by surface-enhanced laser desorption and ionization. Clin Chem 2003;49:1615-23.
8. Semmes OJ, Feng Z, Adam BL, Banez LL, Bigbee WL, Campos D, et al. Evaluation of serum protein profiling by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry for the detection of prostate cancer: I. assessment of platform reproducibility. Clin Chem 2005;51:102-12.