CHMIS-C: A comprehensive herbal medicine information system for cancer

Journal of Medicinal Chemistry

Volumn 48, Issue 5, 2005, Pages 1481-1488

  Fang, Xueliang ^a   Shao, Lei ^a   Zhang, Hui ^a   Wang, Shaomeng ^a  

^a UNIVERSITY OF MICHIGAN COMPREHENSIVE CANCER CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE; ANTINEOPLASTIC AGENT; ARISTOLOCHIC ACID; ASCORBIC ACID; CAFFEIC ACID; CAFFEINE; CHELERYTHRINE; COLCHICINE; CYCLEANINE; CYMARIN; ELLAGIC ACID; GALLIC ACID; GYPENOSIDE; HERBACEOUS AGENT; HISTAMINE; HOMOHARRINGTONINE; METHOXSALEN; NARCICLASINE; NICOTINE; NITIDINE; ORIDONIN; PACLITAXEL; PODOPHYLLOTOXIN; QUERCETIN; RETINOL; RIBOFLAVIN; RUTOSIDE; SITOSTEROL; THIAMINE; UNINDEXED DRUG;

ANGELICA SINENSIS; ARTICLE; CANCER; COIX; COMPREHENSIVE HERBAL MEDICINE INFORMATION SYSTEM FOR CANCER; COMPUTER PROGRAM; CYCLEA; DATA BASE; DRUG RESEARCH; DRUG STRUCTURE; GLYCYRRHIZA; HEDYOTIS; HERB; HERBAL MEDICINE; INFORMATION RETRIEVAL; INFORMATION SCIENCE; INFORMATION SYSTEM; KELP; LAMINARIA; LONICERA; MEDICAL LITERATURE; MEDICAL RESEARCH; PEACH; PRUNELLA; SALVIA MILTIORRHIZA; SARGASSUM; SYSTEM ANALYSIS;

ANTINEOPLASTIC AGENTS, PHYTOGENIC; DATABASES, FACTUAL; INTERNET; NATIONAL INSTITUTES OF HEALTH (U.S.); NEOPLASMS; PHYTOTHERAPY; PLANT PREPARATIONS; UNITED STATES; UNITED STATES FOOD AND DRUG ADMINISTRATION;

EID: 14944361150     PISSN: 00222623     EISSN: None     Source Type: Journal    
DOI: 10.1021/jm049838d     Document Type: Article

References (39)

1. Skolnick, A. A. Old Chinese herbal medicine used for fever yields possible new Alzheimer disease therapy. JAMA, J. Am. Med. Assoc. 1997, 277, 776.
2. Borchers, A. T.; Hackman, R. M.; Keen, C. L.; Stern, J. S.; Gershwin, M. E. Complementary medicine: A review of immunomodulatory effects of Chinese herbal medicines. Am. J. Clin. Nutr. 1997, 66, 1303-1312.
3. Ehling, D. Oriental medicine: An introduction. Altern. Ther. Health Med. 2001, 7, 71-82.
4. Marko, D.; Schatzle, S.; Friedel, A. Inhibition of cyclin-dependent kinase 1 (CDK 1) by indirubin derivatives in human tumor cells. Brit. J. Cancer 2001, 84, 283-289.
5. Hoessel, R.; Leclerc, S.; Endicott, J. A.; Nobel, M. E.; Lawrie, A.; Tunnah, P.; Leost, M.; Damiens, E.; Marie, D.; Marko, D.; Niederberger, E.; Tang, W.; Eisenbrand, G.; Meijer, L. Indirubin, the active constituent of a Chinese antileukaemia medicine, inhibits cyclin-dependent kinases. Nat. Cell Biol. 1999, 1, 60-67.
6. Zhu, Y. P.; Woerdenbag, H. J. Traditional Chinese herbal medicine. Pharm. World Sci. 1995, 17, 103-112.
7. Ernst, E.; Cassileth, B. R. The prevalence of complementary/alternative medicine in cancer. Cancer 1998, 83, 777-782.
8. Goldman, P. Herbal medicines today and the roots of modern pharmacology. Ann. Intern. Med. 2001, 135, 594-600.
9. Liu, F. Application of traditional Chinese drugs in comprehensive treatment of primary liver cancer. J. Tradit. Chin. Med. 1990, 10, 54-60.
10. Yeh, S. D. Anticancer Chinese herbal medicines. Am. J. Chin. Med. 1973, 1, 271-274.
11. Yan, X.; Zhou, J.; Xie, G. Traditional Chinese medicines: Molecular structures, natural source, and applications. Ashgate: Brookfield, VT, 1999.
12. Harborne, J. B.; Baxter, H.; Moss, G. P. Phytochemical dictionary: A handbook of bioactive compounds from plant, 2nd ed.; Taylor & Francis: London, 1999.
13. Sun, W.; Sheng, J. A handbook of natural active components; Chinese Medicine Science and Technology: Beijing, 1997 (in Chinese).
14. Yan, X.; Zhou, J.; Xu, Z. Concept design of computer-aided study on traditional Chinese drugs. J. Chem. Inf. Comput. Sci. 1999, 39, 86-89.
15. He, M.; Yan, X.; Zhou, J.; Xie, G. Traditional Chinese medicine database and application on the web. J. Chem. Inf. Comput. Sci. 2001, 41, 273-277.
16. Wang, B.; Xu, S. Selected anticancer recipes; People's Military Medicines: Beijing, 1995 (in Chinese).
17. Yang, J. Anticancer herbal medicine preparations; Holiday: Taipei, Taiwan, 1990 (in Chinese).
18. Chang, M. Practicable anticancer herbal medicines; Chinese Medicine Science and Technology: Beijing, 1985 (in Chinese).
19. Xu, G.; He, H.; Xu, L.; Jin, R. The Chinese materia medica; Chinese Medicine Science and Technology: Beijing, 1996 (in Chinese).
20. Xu, G.; Wang, Q.; Yu, B.; Pan, M. Coloured illustrations of antitumor Chinese traditional and herbal drugs; Fujian Science and Technology: Fuzhou, China, 1997 (in Chinese).
21. Huang, T.; Shi, C. Dictionary of current research on the prescriptions of Chinese drugs; Science: Beijing, 1996 (in Chinese).
22. Weininger, D. SMILES: A chemical language and information system. 1. Introduction to methodology and encoding rules. J. Chem. Inf. Comput. Sci. 1987, 28, 31-36.
23. SciFinder Scholar is a computer program providing comprehensive chemical and related scientific information for more than 24 million organic and inorganic substances. http://www.cas.org/SCIFINDER/SCHOLAR/, 2002.
24. ChemDraw is a computer program provided by CambridgeSoft Corp., Cambridge, MA.
25. Gasteiger, J.; Rudolph, C.; Sadowski, J. Automatic generation of 3D atomic coordinates for organic molecules. Tetrahedron Comput. Methodol. 1990, 3, 537-547.
26. SYBYL 6.7.1; Tripos Inc.: St. Louis, MO.
27. PubMed is a web-based service of the National Library of Medicine, National Institutes of Health, and provides access to over 12 million MEDLINE citations back to the mid-1960s and additional life science journals. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi.
28. Fang, X.; Wang, S. A web-based 3D-database pharmacophore searching tool for drug discovery. J. Chem. Inf. Comput. Sci. 2002, 42, 192-198.
29. NCI database, the Developmental Therapeutics Program, the National Cancer Institute, http://dtp.nci.nih.gov/docs/dtp_search.html, Release 2003.
30. Monks, A.; Scudiero, D. A.; Skehan, P.; Shoemaker, R. H.; Paull, K. D.; Vistica, D. T.; Hose, C.; Langley, J.; Cronice, P.; Vaigro-Wolf, M.; Gray-Goodrich, M.; Campbell, H.; Mayo, M. R. Feasibility of a high-flux anticancer drug screen using a diverse panel of cultured human tumor cell lines. J. Natl. Cancer Inst. 1991, 83, 757-766.
31. Boyd, M. R.; Paull, K. D.; Rubinstein, L. R. In Cytotoxic anticancer drugs: Models and concepts for drug discovery and development; Vleriote, F. A., Corbett, T. H., Baker, L. H., Eds.; Kluwer Academic: Hingham, MA, 1992; pp 11-34.
32. Fang, X.; Shao, L.; Zhang, H.; Wang, S. Web-based tools for mining the NCI databases for anticancer drug discovery. J. Chem. Inf. Comput. Sci. 2004, 44, 249-257.
33. Sigma-Aldrich Reagent Catalog; Sigma-Aldrich: St. Louis, MO.
34. Chemical Diversity Database, Chemical Diversity Labs, San Diego, CA.
35. ChemBridge Database, Chembridge, San Diego, CA. http://www. chembridgeresearch.com/chembridge/login.html, 2003.
36. The Merck Index, An Encyclopedia of Chemicals, Drugs, and Biologicals, 13th ed.; O'Neil, M. J., Smith, A., Heckelman, P. E., Obenchain, J. R., Jr., Eds.; Merck: Whitehouse Station, NJ, 2001. Web-accessible version is co-published by Merck & Co. and CambridgeSoft. http://www.merck.com/pubs/ mindex/online.html.
37. Ryan Scientific Compound Library, Ryan Scientific, Isle of Palms, SC. http://www.ryansci.com, 2002.
38. ComGenex Compound Library, ComGenex, South San Francisco, CA. http://www.comgenex.com/cgi-bin/inside.php7in= products&I_id=compound, 2002.
39. Rebhan, M.; Chalifa-Caspi, V.; Prilusky, J.; Lancet, D. Gene-Cards: Encyclopedia for genes, proteins and diseases; Bioinformatics Unit and Genome Center, Weizmann Institute of Science: Rehovot, Israel, 1997. http://bioinformatics.weizmann. ac.il/cards.