DNA sequence data and morphology define Cryphonectria species in Europe, China, and Japan

Canadian Journal of Botany

Volumn 82, Issue 12, 2004, Pages 1730-1743

  Myburg, Henrietta ^a   Gryzenhout, Marieka ^a   Wingfield, Brenda D ^a   Milgroom, Michael G ^b   Kaneko, Shigeru ^c   Wingfield, Michael J ^a  

^a UNIVERSITY OF PRETORIA   (South Africa)

^b Department of Obstetrics Gynecology   (United States)

^c FORESTRY AND FOREST PRODUCTS RESEARCH INSTITUTE   (Japan)

Author keywords

Cryphonectria havanensis; Cryphonectria macrospora; Cryphonectria nitschkei; Cryphonectria parasitica; Cryphonectria radicalis; Diaporthales

Indexed keywords

DNA; GENES; MICROORGANISMS; MORPHOLOGY;

CRYPHONECTRIA; PHYLOGENETIC COMPARISONS; TREE PATHOGENS;

PLANTS (BOTANY);

DNA FINGERPRINTING; FUNGUS; MORPHOLOGY; PHYLOGENY; TAXONOMY;

ANATOMY; GENES; NUCLEIC ACIDS; PATHOGENS; PLANTS;

ASIA; CHINA; EASTERN HEMISPHERE; EURASIA; EUROPE; FAR EAST; JAPAN; WORLD;

BRUCEA JAVANICA; CASTANOPSIS CUSPIDATA; CRYPHONECTRIA; CRYPHONECTRIA HAVANENSIS; CRYPHONECTRIA NITSCHKEI; CRYPHONECTRIA PARASITICA; CRYPHONECTRIA RADICALIS; EUCALYPTUS GLOBULUS; PYRUS SINENSIS; QUERCUS; QUERCUS GROSSESERRATA;

EID: 14844296489     PISSN: 00084026     EISSN: None     Source Type: Journal    
DOI: 10.1139/B04-135     Document Type: Article

References (54)

1. Anagnostakis, S.L. 1983. Quest for an Endothia. Bull. Br. Mycol. Soc. 17: 147.
2. Anagnostakis, S.L. 1987. Chestnut blight: the classical problem of an introduced pathogen. Mycologia, 79: 23-37.
3. Anagnostakis, S.L. 1992. Chestnuts and the introduction of chestnut blight. Annu. Rep. North. Nut Grow. Assoc. 83: 3942.
4. Anagnostakis, S.L. 1995. The pathogens and pests of chestnuts. Adv. Bot. Res. 21: 125-145.
5. Anderson P.J., and Anderson, H.W. 1912. The chestnut blight fungus and a related saprophyte. Phytopathology, 2: 204-210.
6. Barr, M.E. 1978. The Diaporthales of North America with emphasis on Gnomonia and its segregates. Mycol. Mem. 7: 1-232.
7. Bazzigher, G., and Miller, G.A. 1991. Blight-resistant chestnut selections of Switzerland: a valuable germ plasm resource. Plant Dis. 75: 5-9.
8. Berkeley, M.J., and Broome, C.E. 1875. Enumeration of the fungi of Ceylon. J. Linn. Soc. Bot. 14: 29-140.
9. Bissegger, M., and Heiniger, U. 1991. Chestnut blight (Cryphonectria parasitica) north of the Swiss alps. Eur. J. For. Pathol. 21: 250-252.
10. Bruner, S.C. 1916. A new species of Endothia. Mycologia, 8: 239-242.
11. Castlebury, L.A., Rossman, A.Y., Jaklitsch, W.J., and Vasilyeva, L.N. 2002. A preliminary overview of the Diaporthales based on large subunit nuclear ribosomal DNA sequences. Mycologia, 94: 1017-1031.
12. Clapper, R.B. 1952. Relative blight resistance of some chestnut species and hybrids. J. For. 50: 453-455.
13. Conradie, E., Swart, W.J., and Wingfield, M.J. 1990. Cryphonectria canker of Eucalyptus, an important disease in plantation forestry in South Africa. S. Afr. For. J. 152: 43-49.
14. Cortesi, P., Milgroom, M.G., De Martino, A., Intropido, M., and Bisiach, M. 1997. Struttura delle popolazioni e genetica dell'incompatibilità vegetativa in Cryphonectria parasitica, ed. Proc. Nat. Chestnut Conference, Cison di Valmarino, Italy, C.S.C. S. Lucia di Piave. pp. 437-453.
15. Farris, J.S., Källersjö, M., Kluge, A.G., and Bult, C. 1994. Testing significance of incongruence. Cladistics, 10: 315-319.
16. Fries, E.M. 1828. Elenchus fungorum, v. 2. Gryphiswaldiae, p. 73.
17. Glass, N.L., and Donaldson, G.C. 1995. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl. Environ. Microbiol. 61: 1323-1330.
18. Grente, J. 1965. Les formes Hypovirulentes d'Endothia parasitica et les espoirs de lutte contre le chancre du châtaignier. Académie d'Agriculture de France, Extrait du Proces-verbal de la Séance, 51: 1033-1037
19. Grente, J. 1975. La lutte biologique contre le chancre du châtaignier par "Hypovirulence contagieuse". Annu. Phytopathol. 7: 216-218.
20. Griffin, G.J. 1986. Chestnut blight and its control. Hortic. Rev. 8: 291-336.
21. Gryzenhout, M., Eisenberg, B.E., Coutinho, T.A., Wingfield, B.D., and Wingfield, M.J. 2003. Pathogenicity of Cryphonectria eucalypti to Eucalyptus clones in South Africa. For. Ecol. Manag. 176: 427-437.
22. Heiniger, U., and Rigling, D. 1994. Biological control of chestnut blight in Europe. Annu. Rev. Phytopathol. 32: 581-599.
23. Hodges, C.S. 1980. The taxonomy of Diaporthe cubensis. Mycologia, 72: 542-548.
24. Hoegger, P.J., Rigling, D., Holdenrieder, O., and Heiniger, U. 2002. Cryphonectria radicalis: rediscovery of a lost fungus. Mycologia, 94: 105-115.
25. Kobayashi, T. 1970. Taxonomic studies of Japanese Diaporthaceae with special reference to their life histories. Bull. Gov. For. Exp. Stn. (Tokyo), 226: 132-147.
26. Kobayashi, T., and Itô, K. 1956a. Notes on the genus Endothia in Japan I. Species of Endothia collected in Japan. Bull. Gov. For. Exp. Stn. (Tokyo), 92: 81-98.
27. Kobayashi, T., and Itô, K. 1956b. Two new species of Endothia. Ann. Phytopathol. Soc. Jpn. 21: 151-152.
28. Liu, Y.-C., Linder-Basso, D., Hillman, B.I., Kaneko, S., and Milgroom, M.G. 2003. Evidence for interspecies transmission of viruses in natural populations of filamentous fungi in the genus Cryphonectria. Mol. Ecol. 12: 1619-1628.
29. Metcalf, H. 1908. The immunity of Japanese chestnut to the bark disease. U.S.D.A. Bull. 121.
30. Milgroom, M.G., Wang, K., Zhou, Y., Lipari, S.E., and Kaneko, S. 1996. Intercontinental population structure of the chestnut blight fungus, Cryphonectria parasitica. Mycologia, 88: 179-190.
31. Myburg, H., Wingfield, B.D., and Wingfield, M.J. 1999. Phylogeny of Cryphonectria cubensis and allied species inferred from DNA analysis. Mycologia, 91: 243-250.
32. Myburg, H., Gryzenhout, M., Wingfield, B.D., and Wingfield, M.J. 2002. β-Tubulin and histone H3 gene sequences distinguish Cryphonectria cubensis from South Africa, Asia, and South America. Can. J. Bot. 80: 590-596.
33. Myburg, H., Gryzenhout, M., Wingfield, B.D., Wingfield, M.J., and Stipes, R.J. 2004. A reassessment of the fungal genera Cryphonectria and Endothia based on DNA sequence data. Mycologia, 96: 990-1001.
34. Old, K.M., and Kobayashi, T. 1988. Eucalypts are susceptible to the chestnut blight fungus, Cryphonectria parasitica. Aus. J. Bot. 36: 599-603.
35. Old, K.M., Murray, D.I.L., Kile, G.A., Simpson, J., and Malafant, K.W.J. 1986. The pathology of fungi isolated from eucalypt cankers in south-eastern Australia. Austr. For. Res. 16: 21-36.
36. Posada, D., and Crandall, K.A. 1998. MODELTEST: testing the model of DNA substitution. Bioinform. Appl. Note, 14: 817-818.
37. Rayner, R.W. 1970. A mycological colour chart. Commonwealth Mycological Institute and British Mycological Society, Kew, Surrey, UK.
38. Roane, M.K. 1986a. Taxonomy of the genus Endothia. In Chestnut blight, other Endothia diseases, and the genus Endothia. Edited by M.K. Roane, G.J. Griffin, and J.R. Elkins. APS Press, St. Paul, Minn. pp. 28-39.
39. Roane, M.K. 1986b. Other diseases caused by Endothia species. In Chestnut blight, other Endothia diseases, and the genus Endothia. Edited by M.K. Roane, G.J. Griffin, and J.R. Elkins. APS Press, St. Paul, Minn. p. 27.
40. Roane, M.K., and Stipes R.J. 1978. Pigments in the fungal genus Endothia. Va. J. Sci. 29: 137-141.
41. Shear, C.L., and Stevens, N.E. 1913. The chestnut-blight parasite (Endothia parasitica) from China. Science (Washington, DC), 38: 295-297.
42. Shear, C.L., and Stevens, N.E. 1916. The discovery of the chestnut blight parasite (Endothia parasitica) and other chestnut fungi in Japan. Science (Washington, DC), 43: 173-176.
43. Shear, C.L., Stevens, N.B., and Tiller, R.J. 1917. Endothia parasitica and related species. U.S.D.A. Bull. 380: 1-82.
44. Sotirovski, K., Papazova-Anakieva, I., Grünwald, N.J., and Milgroom, M.G. 2004. Low diversity of vegetative compatibility types and mating type in Cryphonectria parasitica in the southern Balkans. Plant Pathol. 53: 325-333.
45. Sowerby, J. 1814. Colored figures of English fungi or mushrooms. Supplement. London, plate 438.
46. Swofford, D.L. 1998. PAUP*4.0. Phylogenetic analysis using parsimony. Sinauer Associates, Sunderland, Mass.
47. Tamura, K., and Nei, M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10: 512-526.
48. Teng, S.C. 1934. Notes on Sphaeriales from China. Sinensia, 4: 359-449.
49. Van der Westhuizen, I.P., Wingfield, M.J., Kemp, G.H.J., and Swart, W.J. 1993. First report of the canker pathogen Endothia gyrosa on Eucalyptus in South Africa. Plant Pathol. 42: 661-663.
50. Venter, M., Myburg, H., Wingfield, B.D., Coutinho, T.A., and Wingfield, M.J. 2002. A new species of Cryphonectria from South Africa and Australia, pathogenic on Eucalyptus. Sydowia, 54: 98-117.
51. Walker, J., Old, K.M., and Murray, D.I.L. 1985. Endothia gyrosa on Eucalyptus in Australia with notes on some other species of Endothia and Cryphonectria. Mycotaxon, 23: 353-370.
52. White, T.J., Bruns, T., Lee, S., and Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR protocols: a guide to methods and applications. Edited by M.A. Innis, D.H. Gelfand, J.J. Sninsky, and T.J. White. Academic Press, San Diego, Calif. pp. 315-322.
53. Wingfield, M.J. 2003. Daniel McAlpine memorial lecture. Increasing threat of diseases to exotic plantation forests in the Southern Hemisphere: lessons from Cryphonectria canker. Australas. Plant Pathol. 32: 133-139.
54. Zander, R.H. 2004. Minimal values for reliability of Bootstrap and Jackknife proportions, decay index, and Bayesian posterior probability. PhyloInformatics, 2: 1-13.