메뉴 건너뛰기




Volumn 347, Issue 3, 2005, Pages 489-494

Intramolecular cooperativity in a protein binding site assessed by combinatorial shotgun scanning mutagenesis

Author keywords

Additivity; Cooperativity; Growth hormone; Phage display; Protein engineering

Indexed keywords

GROWTH HORMONE RECEPTOR; HUMAN GROWTH HORMONE; MUTANT PROTEIN;

EID: 14744305626     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2005.01.040     Document Type: Article
Times cited : (26)

References (25)
  • 2
    • 0034193568 scopus 로고    scopus 로고
    • Protein-protein interactions define specificity in signal transduction
    • T. Pawson, and P. Nash Protein-protein interactions define specificity in signal transduction Genes Dev. 14 2000 1027 1047
    • (2000) Genes Dev. , vol.14 , pp. 1027-1047
    • Pawson, T.1    Nash, P.2
  • 3
    • 0036468365 scopus 로고    scopus 로고
    • Eukaryotic transcription factors
    • A.J. Warren Eukaryotic transcription factors Curr. Opin. Struct. Biol. 12 2002 107 114
    • (2002) Curr. Opin. Struct. Biol. , vol.12 , pp. 107-114
    • Warren, A.J.1
  • 4
    • 1042290495 scopus 로고    scopus 로고
    • Molecular interactions at the T-cell-antigen-presenting cell interface
    • N.R. Gascoigne, and T. Zal Molecular interactions at the T-cell-antigen-presenting cell interface Curr. Opin. Immunol. 16 2004 114 119
    • (2004) Curr. Opin. Immunol. , vol.16 , pp. 114-119
    • Gascoigne, N.R.1    Zal, T.2
  • 5
    • 0024403619 scopus 로고
    • High-resolution epitope mapping of hGH-receptor interactions by alanine-scanning mutagenesis
    • B.C. Cunningham, and J.A. Wells High-resolution epitope mapping of hGH-receptor interactions by alanine-scanning mutagenesis Science 244 1989 1081 1085
    • (1989) Science , vol.244 , pp. 1081-1085
    • Cunningham, B.C.1    Wells, J.A.2
  • 6
    • 0027132013 scopus 로고
    • Comparison of a structural and a functional epitope
    • B.C. Cunningham, and J.A. Wells Comparison of a structural and a functional epitope J. Mol. Biol. 234 1993 554 563
    • (1993) J. Mol. Biol. , vol.234 , pp. 554-563
    • Cunningham, B.C.1    Wells, J.A.2
  • 7
    • 0025082684 scopus 로고
    • Additivity of mutational effects in proteins
    • J.A. Wells Additivity of mutational effects in proteins Biochemistry 29 1990 8509 8517
    • (1990) Biochemistry , vol.29 , pp. 8509-8517
    • Wells, J.A.1
  • 8
    • 0030322783 scopus 로고    scopus 로고
    • Double-mutant cycles: A powerful tool for analyzing protein structure and function
    • A. Horovitz Double-mutant cycles: a powerful tool for analyzing protein structure and function Fold. Des. 1 1996 R121 R126
    • (1996) Fold. Des. , vol.1
    • Horovitz, A.1
  • 9
    • 0021504608 scopus 로고
    • The use of double mutants to detect structural changes in the active site of the tyrosyl-tRNA synthetase (Bacillus stearothermophilus)
    • P.J. Carter, G. Winter, A.J. Wilkinson, and A.R. Fersht The use of double mutants to detect structural changes in the active site of the tyrosyl-tRNA synthetase (Bacillus stearothermophilus) Cell 38 1984 835 840
    • (1984) Cell , vol.38 , pp. 835-840
    • Carter, P.J.1    Winter, G.2    Wilkinson, A.J.3    Fersht, A.R.4
  • 10
    • 0043237620 scopus 로고    scopus 로고
    • The functional binding epitope of a high affinity variant of human growth hormone mapped by shotgun alanine-scanning mutagenesis: Insights into the mechanisms responsible for improved binding
    • G. Pal, A.A. Kossiakoff, and S.S. Sidhu The functional binding epitope of a high affinity variant of human growth hormone mapped by shotgun alanine-scanning mutagenesis: insights into the mechanisms responsible for improved binding J. Mol. Biol. 332 2003 195 204
    • (2003) J. Mol. Biol. , vol.332 , pp. 195-204
    • Pal, G.1    Kossiakoff, A.A.2    Sidhu, S.S.3
  • 11
    • 0036295439 scopus 로고    scopus 로고
    • Comprehensive functional maps of the antigen-binding site of an anti-ErbB2 antibody obtained with shotgun scanning mutagenesis
    • F.F. Vajdos, C.W. Adams, T.N. Breece, L.G. Presta, A.M. de Vos, and S.S. Sidhu Comprehensive functional maps of the antigen-binding site of an anti-ErbB2 antibody obtained with shotgun scanning mutagenesis J. Mol. Biol. 320 2002 415 428
    • (2002) J. Mol. Biol. , vol.320 , pp. 415-428
    • Vajdos, F.F.1    Adams, C.W.2    Breece, T.N.3    Presta, L.G.4    De Vos, A.M.5    Sidhu, S.S.6
  • 13
    • 0027211894 scopus 로고
    • Additivity of mutant effects assessed by binomial mutagenesis
    • L.M. Gregoret, and R.T. Sauer Additivity of mutant effects assessed by binomial mutagenesis Proc. Natl Acad. Sci. USA 90 1993 4246 4250
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 4246-4250
    • Gregoret, L.M.1    Sauer, R.T.2
  • 14
    • 0001105364 scopus 로고
    • The minimum expectation in c2 goodness-of-fit tests and the accuracy of approximations for the null distribution
    • J.K. Yarnold The minimum expectation in c2 goodness-of-fit tests and the accuracy of approximations for the null distribution J. Am. Stat. Assoc. 65 1970 864 886
    • (1970) J. Am. Stat. Assoc. , vol.65 , pp. 864-886
    • Yarnold, J.K.1
  • 15
    • 14744299244 scopus 로고
    • The chi-squared test of independence
    • Wadsworth and Brooks Pacific Grove, CA
    • J.A. Rice The chi-squared test of independence Mathematical Statistics and Data Analysis 1994 Wadsworth and Brooks Pacific Grove, CA 489 491
    • (1994) Mathematical Statistics and Data Analysis , pp. 489-491
    • Rice, J.A.1
  • 16
    • 0036970470 scopus 로고    scopus 로고
    • Quantifying beta-sheet stability by phage display
    • M.D. Distefano, A. Zhong, and A.G. Cochran Quantifying beta-sheet stability by phage display J. Mol. Biol. 322 2002 179 188
    • (2002) J. Mol. Biol. , vol.322 , pp. 179-188
    • Distefano, M.D.1    Zhong, A.2    Cochran, A.G.3
  • 17
    • 0035852744 scopus 로고    scopus 로고
    • Predicting the reactivity of proteins from their sequence alone: Kazal family of protein inhibitors of serine proteinases
    • S.M. Lu, W. Lu, M.A. Qasim, S. Anderson, I. Apostol, and W. Ardelt Predicting the reactivity of proteins from their sequence alone: Kazal family of protein inhibitors of serine proteinases Proc. Natl Acad. Sci. USA 98 2001 1410 1415
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 1410-1415
    • Lu, S.M.1    Lu, W.2    Qasim, M.A.3    Anderson, S.4    Apostol, I.5    Ardelt, W.6
  • 18
    • 0032875696 scopus 로고    scopus 로고
    • Defining epitopes: It's not as easy as it seems
    • N.S. Greenspan, and E. Di Cera Defining epitopes: it's not as easy as it seems Nature Biotechnol. 17 1999 936 937
    • (1999) Nature Biotechnol. , vol.17 , pp. 936-937
    • Greenspan, N.S.1    Di Cera, E.2
  • 19
    • 2442660389 scopus 로고    scopus 로고
    • Dissecting the binding energy epitope of a high-affinity variant of human growth hormone: Cooperative and additive effects from combining mutations from independently selected phage display mutagenesis libraries
    • B. Bernat, M. Sun, M. Dwyer, M. Feldkamp, and A.A. Kossiakoff Dissecting the binding energy epitope of a high-affinity variant of human growth hormone: cooperative and additive effects from combining mutations from independently selected phage display mutagenesis libraries Biochemistry 43 2004 6076 6084
    • (2004) Biochemistry , vol.43 , pp. 6076-6084
    • Bernat, B.1    Sun, M.2    Dwyer, M.3    Feldkamp, M.4    Kossiakoff, A.A.5
  • 20
    • 0026598960 scopus 로고
    • Human growth hormone and the extracellular domain of its receptor: Crystal structure of the complex
    • A.M. de Vos, M.H. Ultsch, and A.A. Kossiakoff Human growth hormone and the extracellular domain of its receptor: crystal structure of the complex Science 255 1992 306 312
    • (1992) Science , vol.255 , pp. 306-312
    • De Vos, A.M.1    Ultsch, M.H.2    Kossiakoff, A.A.3
  • 21
    • 0023613953 scopus 로고
    • Rapid and efficient site-specific mutagenesis without phenotypic selection
    • T.A. Kunkel, J.D. Roberts, and R.A. Zakour Rapid and efficient site-specific mutagenesis without phenotypic selection Methods Enzymol. 154 1987 367 382
    • (1987) Methods Enzymol. , vol.154 , pp. 367-382
    • Kunkel, T.A.1    Roberts, J.D.2    Zakour, R.A.3
  • 22
  • 23
    • 0025259656 scopus 로고
    • The human growth hormone receptor. Secretion from Escherichia coli and disulfide bonding pattern of the extracellular binding domain
    • G. Fuh, M.G. Mulkerrin, S. Bass, N. McFarland, M. Brochier, and J.H. Bourell The human growth hormone receptor. Secretion from Escherichia coli and disulfide bonding pattern of the extracellular binding domain J. Biol. Chem. 265 1990 3111 3115
    • (1990) J. Biol. Chem. , vol.265 , pp. 3111-3115
    • Fuh, G.1    Mulkerrin, M.G.2    Bass, S.3    McFarland, N.4    Brochier, M.5    Bourell, J.H.6
  • 24
    • 0026332810 scopus 로고
    • Dimerization of the extracellular domain of the human growth hormone receptor by a single hormone molecule
    • B.C. Cunningham, M. Ultsch, A.M. de Vos, M.G. Mulkerrin, K.R. Clauser, and J.A. Wells Dimerization of the extracellular domain of the human growth hormone receptor by a single hormone molecule Science 254 1991 821 825
    • (1991) Science , vol.254 , pp. 821-825
    • Cunningham, B.C.1    Ultsch, M.2    De Vos, A.M.3    Mulkerrin, M.G.4    Clauser, K.R.5    Wells, J.A.6
  • 25
    • 0037417787 scopus 로고    scopus 로고
    • Determination of the energetics governing the regulatory step in growth hormone-induced receptor homodimerization
    • B. Bernat, G. Pal, M. Sun, and A.A. Kossiakoff Determination of the energetics governing the regulatory step in growth hormone-induced receptor homodimerization Proc. Natl Acad. Sci. USA 100 2003 952 957
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 952-957
    • Bernat, B.1    Pal, G.2    Sun, M.3    Kossiakoff, A.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.