An alternative sampling algorithm for use in liquid chromatography/tandem mass spectrometry experiments

Rapid Communications in Mass Spectrometry

Volumn 19, Issue 5, 2005, Pages 589-596

  Kohli, Bernhard M ^a   Eng, Jimmy K ^b   Nitsch, Roger M ^a   Konietzko, Uwe ^a  

^a Division of Psychiatry Research   (Switzerland)

^b INSTITUTE FOR SYSTEMS BIOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY;

CHROMATOGRAPHIC PEAKS; COLLISION INDUCED DISSOCIATION; COLLISION-INDUCED DISSOCIATION SPECTRA; COMPLEX PEPTIDE MIXTURES; LC-MS-MS; LIQUID CHROMATOGRAPHY-TANDEM MASS SPECTROMETRY; LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY; SAMPLING ALGORITHM; TIME WINDOWS; Z VALUE;

PEPTIDES;

INTERFERON; PEPTIDE;

ALGORITHM; ARTICLE; CALCULATION; COLLISIONALLY ACTIVATED DISSOCIATION; COMPUTER PROGRAM; CONTAMINATION; LIQUID CHROMATOGRAPHY; PEPTIDE ANALYSIS; SAMPLING; TANDEM MASS SPECTROMETRY; VALIDATION PROCESS;

EID: 14744292980     PISSN: 09514198     EISSN: None     Source Type: Journal    
DOI: 10.1002/rcm.1827     Document Type: Article

References (11)

1. Li X-j, Pedrioli PGA, Eng J, Martin D, Yi EC, Lee H, Aebersold R. Anal. Chem. 2004; 76: 3856.
2. Le Blanc JCY, Bloomfield N. In Proc. 52nd ASMS Conf. Mass Spectrometry and Allied Topics, Nashville, Tennessee, 2004.
3. von Haller PD, Yi E, Donohoe S, Vaughn K, Keller A, Nesvizhskii AI, Eng J, Li X-j, Goodlett DR, Aebersold R, Watts JD. Mol. Cell. Proteomics 2003; 2: 428.
4. Yan W, Lee H, Yi EC, Reiss D, Shannon P, Kwieciszewski BK, Coito C, Li X, Keller A, Eng J, Galitski T, Goodlett DR, Aebersold R, Katze MG. Genome Biol. 2004; 5: R54.
5. Pedrioli PG, Pedrioli PGA, Eng JK, Hubley R, Vogelzang M, Deutsch EW, Raught B, Pratt B, Nilsson E, Angeletti RH, Apweiler R, Cheung K, Costello CE, Hermjakob H, Huang S, Julian RK Jr, Kapp E, McComb ME, Oliver SG, Omenn G, Paton NW, Simpson R, Smith R, Taylor CF, Zhu W, Aebersold R. Nat. Biotechnol. 2004; 22: 1459.
6. Available: ftp://blisun5.unizh.ch/Fulspec; password from the corresponding author.
7. Scopes RK. Protein Purification. Springer: Heidelberg, 1994.
8. Keller A, Nesvizhskii AI, Kolker E, Aebersold R. Anal. Chem. 2002; 74: 5383.
9. Courtesy of P. Wester. Available: http://www.freevbcode. com/ShowCode.Asp?ID=5136.
10. Elias JE, Gibbons FD, King OD, Roth FP, Gygi SP. Nat. Biotechnol. 2004; 22: 214.
11. Venable JD, Dong MQ, Wohlschlegel J, Dillin A, Yates JR. Nat. Methods 2004; 1: 39.