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Volumn 41, Issue 4, 2005, Pages 567-582

Functional distribution and dynamics of Arabidopsis SR splicing factors in living plant cells

Author keywords

Arabidopsis; Cell cycle; Nuclear speckles; Pre mRNA splicing; SR proteins; Transient expression

Indexed keywords

CELLS; FLUORESCENCE; GROWTH KINETICS; PLANTS (BOTANY); RNA; TOBACCO;

EID: 14644425438     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2004.02321.x     Document Type: Article
Times cited : (61)

References (56)
  • 1
    • 0346687520 scopus 로고    scopus 로고
    • Nuclear localization and in vivo dynamics of a plant-specific serine/arginine-rich protein
    • Ali, G.S., Golovkin, M. and Reddy, A.S. (2003) Nuclear localization and in vivo dynamics of a plant-specific serine/arginine-rich protein. Plant J. 36, 883-893.
    • (2003) Plant J. , vol.36 , pp. 883-893
    • Ali, G.S.1    Golovkin, M.2    Reddy, A.S.3
  • 4
    • 0032428592 scopus 로고    scopus 로고
    • Coiled body numbers in the Arabidopsis root epidermis are regulated by cell type, developmental stage and cell cycle parameters
    • Boudonck, K., Dolan, L. and Shaw, P.J. (1998) Coiled body numbers in the Arabidopsis root epidermis are regulated by cell type, developmental stage and cell cycle parameters. J. Cell Sci. 111, 3687-3694.
    • (1998) J. Cell Sci. , vol.111 , pp. 3687-3694
    • Boudonck, K.1    Dolan, L.2    Shaw, P.J.3
  • 5
    • 0032837037 scopus 로고    scopus 로고
    • The movement of coiled bodies visualized in living plant cells by the green fluorescent protein
    • Boudonck, K., Dolan, L. and Shaw, P.J. (1999) The movement of coiled bodies visualized in living plant cells by the green fluorescent protein. Mol. Biol. Cell, 10, 2297-2307.
    • (1999) Mol. Biol. Cell , vol.10 , pp. 2297-2307
    • Boudonck, K.1    Dolan, L.2    Shaw, P.J.3
  • 7
    • 0038401969 scopus 로고    scopus 로고
    • Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity
    • Caceres, J.F., Misteli, T., Screaton, G.R., Spector, D.L. and Krainer, A.R. (1997) Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity. J. Cell Biol. 138, 225-238.
    • (1997) J. Cell Biol. , vol.138 , pp. 225-238
    • Caceres, J.F.1    Misteli, T.2    Screaton, G.R.3    Spector, D.L.4    Krainer, A.R.5
  • 10
    • 0015861994 scopus 로고
    • Further experiments on the role of the nucleolus in the transfer of RNA from nucleus to cytoplasm
    • Deak, I.I. (1973) Further experiments on the role of the nucleolus in the transfer of RNA from nucleus to cytoplasm. J. Cell Sci. 13, 395-401.
    • (1973) J. Cell Sci. , vol.13 , pp. 395-401
    • Deak, I.I.1
  • 12
    • 1642327457 scopus 로고    scopus 로고
    • Nuclear bodies and compartmentalization of pre-mRNA splicing factors in higher plants
    • Docquier, S., Tillemans, V., Deltour, R. and Motte, P. (2004) Nuclear bodies and compartmentalization of pre-mRNA splicing factors in higher plants. Chromosome, 112, 255-266.
    • (2004) Chromosome , vol.112 , pp. 255-266
    • Docquier, S.1    Tillemans, V.2    Deltour, R.3    Motte, P.4
  • 13
    • 2542449966 scopus 로고    scopus 로고
    • Tissue-specific expression and dynamic organization of SR splicing factors in Arabidopsis
    • Fang, Y., Hearn, S. and Spector, D.L. (2004) Tissue-specific expression and dynamic organization of SR splicing factors in Arabidopsis. Mol. Biol. Cell, 15, 2664-2673.
    • (2004) Mol. Biol. Cell , vol.15 , pp. 2664-2673
    • Fang, Y.1    Hearn, S.2    Spector, D.L.3
  • 16
    • 0036734759 scopus 로고    scopus 로고
    • All small nuclear RNAs (snRNAs) of the [U4/U6.U5] Tri-snRNP localize to nucleoli; Identification of the nucleolar localization element of U6 snRNA
    • Gerbi, S.A. and Lange, T.S. (2002) All small nuclear RNAs (snRNAs) of the [U4/U6.U5] Tri-snRNP localize to nucleoli; Identification of the nucleolar localization element of U6 snRNA. Mol. Biol. Cell, 13, 3123-3137.
    • (2002) Mol. Biol. Cell , vol.13 , pp. 3123-3137
    • Gerbi, S.A.1    Lange, T.S.2
  • 17
    • 0842288796 scopus 로고    scopus 로고
    • The Glc7p nuclear phosphatase promotes mRNA export by facilitating association of Mex67p with mRNA
    • Gilbert, W. and Guthrie, C. (2004) The Glc7p nuclear phosphatase promotes mRNA export by facilitating association of Mex67p with mRNA. Mol. Cell, 13, 201-212.
    • (2004) Mol. Cell , vol.13 , pp. 201-212
    • Gilbert, W.1    Guthrie, C.2
  • 18
    • 0033835333 scopus 로고    scopus 로고
    • Sorting out the complexity of SR protein functions
    • Graveley, B.R. (2000) Sorting out the complexity of SR protein functions. RNA, 6, 1197-1211.
    • (2000) RNA , vol.6 , pp. 1197-1211
    • Graveley, B.R.1
  • 19
    • 0042348139 scopus 로고    scopus 로고
    • Identification of regulatory sequence elements within the transcription promoter region of NpABC1, a gene encoding a plant ABC transporter induced by diterpenes
    • Grec, S., Vanham, D., de Ribaucourt, J.C., Purnelle, B. and Boutry, M. (2003) Identification of regulatory sequence elements within the transcription promoter region of NpABC1, a gene encoding a plant ABC transporter induced by diterpenes. Plant J. 35, 237-250.
    • (2003) Plant J. , vol.35 , pp. 237-250
    • Grec, S.1    Vanham, D.2    De Ribaucourt, J.C.3    Purnelle, B.4    Boutry, M.5
  • 20
    • 0028286596 scopus 로고
    • A serine kinase regulates intracellular localization of splicing factors in the cell cycle
    • Gui, J.F., Lane, W.S. and Fu, X.D. (1994) A serine kinase regulates intracellular localization of splicing factors in the cell cycle. Nature, 369, 678-682.
    • (1994) Nature , vol.369 , pp. 678-682
    • Gui, J.F.1    Lane, W.S.2    Fu, X.D.3
  • 21
    • 0029618696 scopus 로고
    • An amino acid sequence motif sufficient for subnuclear localization of an arginine/serine-rich splicing factor
    • Hedley, M.L., Amrein, H. and Maniatis, T. (1995) An amino acid sequence motif sufficient for subnuclear localization of an arginine/serine-rich splicing factor. Proc. Natl Acad. Sci. USA, 92, 11524-11528.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 11524-11528
    • Hedley, M.L.1    Amrein, H.2    Maniatis, T.3
  • 22
    • 3042836378 scopus 로고    scopus 로고
    • A molecular link between SR protein dephosphorylation and mRNA export
    • Huang, Y., Yario, T.A. and Steitz, J.A. (2004) A molecular link between SR protein dephosphorylation and mRNA export. Proc. Natl Acad. Sci. USA, 101, 9666-9670.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 9666-9670
    • Huang, Y.1    Yario, T.A.2    Steitz, J.A.3
  • 24
    • 4344662645 scopus 로고    scopus 로고
    • A plethora of plant serine/arginine-rich proteins: Redundancy or evolution of novel gene functions?
    • Kalyna, M. and Barta, A. (2004) A plethora of plant serine/arginine-rich proteins: redundancy or evolution of novel gene functions? Biochem. Soc. Trans. 32, 561-564.
    • (2004) Biochem. Soc. Trans. , vol.32 , pp. 561-564
    • Kalyna, M.1    Barta, A.2
  • 25
    • 0141632822 scopus 로고    scopus 로고
    • Ectopic expression of atRSZ33 reveals its function in splicing and causes pleiotropic changes in development
    • Kalyna, M., Lopato, S. and Barta, A. (2003) Ectopic expression of atRSZ33 reveals its function in splicing and causes pleiotropic changes in development. Mol. Biol. Cell, 14, 3565-3577.
    • (2003) Mol. Biol. Cell , vol.14 , pp. 3565-3577
    • Kalyna, M.1    Lopato, S.2    Barta, A.3
  • 26
    • 0035901565 scopus 로고    scopus 로고
    • The Y14 protein communicates to the cytoplasm the position of exon-exon junctions
    • Kim, V.N., Yong, J., Kataoka, N., Abel, L., Diem, M.D. and Dreyfuss, G. (2001) The Y14 protein communicates to the cytoplasm the position of exon-exon junctions. Embo J. 20, 2062-2068.
    • (2001) Embo J. , vol.20 , pp. 2062-2068
    • Kim, V.N.1    Yong, J.2    Kataoka, N.3    Abel, L.4    Diem, M.D.5    Dreyfuss, G.6
  • 27
    • 0034821650 scopus 로고    scopus 로고
    • Intracellular contents and assembly states of all 12 subunits of the RNA polymerase II in the fission yeast Schizosaccharomyces pombe
    • Kimura, M., Sakurai, H. and Ishihama, A. (2001) Intracellular contents and assembly states of all 12 subunits of the RNA polymerase II in the fission yeast Schizosaccharomyces pombe. Eur. J. Biochem. 268, 612-619.
    • (2001) Eur. J. Biochem. , vol.268 , pp. 612-619
    • Kimura, M.1    Sakurai, H.2    Ishihama, A.3
  • 28
    • 0029891101 scopus 로고    scopus 로고
    • The structure and function of proteins involved in mammalian pre-mRNA splicing
    • Kramer, A. (1996) The structure and function of proteins involved in mammalian pre-mRNA splicing. Annu. Rev. Biochem. 65, 367-409.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 367-409
    • Kramer, A.1
  • 29
    • 4944243957 scopus 로고    scopus 로고
    • DOMINO1, a member of a small plant-specific gene family, encodes a protein essential for nuclear and nucleolar functions
    • Lahmy, S., Guilleminot, J., Cheng, C.M., Bechtold, N., Albert, S., Pelletier, G., Delseny, M. and Devic, M. (2004) DOMINO1, a member of a small plant-specific gene family, encodes a protein essential for nuclear and nucleolar functions. Plant J. 39, 809-820.
    • (2004) Plant J. , vol.39 , pp. 809-820
    • Lahmy, S.1    Guilleminot, J.2    Cheng, C.M.3    Bechtold, N.4    Albert, S.5    Pelletier, G.6    Delseny, M.7    Devic, M.8
  • 30
    • 0037907728 scopus 로고    scopus 로고
    • Differential effects of hyperphosphorylation on splicing factor SRp55
    • Lai, M.C., Lin, R.I. and Tarn, W.Y. (2003) Differential effects of hyperphosphorylation on splicing factor SRp55. Biochem J. 371, 937-945.
    • (2003) Biochem J. , vol.371 , pp. 937-945
    • Lai, M.C.1    Lin, R.I.2    Tarn, W.Y.3
  • 31
    • 0041669439 scopus 로고    scopus 로고
    • Nuclear speckles: A model for nuclear organelles
    • Lamond, A.I. and Spector, D.L. (2003) Nuclear speckles: a model for nuclear organelles. Nat. Rev. Mol. Cell Biol. 4, 605-612.
    • (2003) Nat. Rev. Mol. Cell Biol. , vol.4 , pp. 605-612
    • Lamond, A.I.1    Spector, D.L.2
  • 32
    • 0032489466 scopus 로고    scopus 로고
    • Two small subunits in Ara bidopsis RNA polymerase II are related to yeast RPB4 and RPB7 and interact with one another
    • Larkin, R.M. and Guilfoyle, T.J. (1998) Two small subunits in Ara bidopsis RNA polymerase II are related to yeast RPB4 and RPB7 and interact with one another. J. Biol. Chem. 273, 5631-5637.
    • (1998) J. Biol. Chem. , vol.273 , pp. 5631-5637
    • Larkin, R.M.1    Guilfoyle, T.J.2
  • 33
    • 0029994329 scopus 로고    scopus 로고
    • A protein that shuttles between the nucleus and the cytoplasm is an important mediator of RNA export
    • Lee, M.S., Henry, M. and Silver, P.A. (1996) A protein that shuttles between the nucleus and the cytoplasm is an important mediator of RNA export. Genes Dev. 10, 1233-1246.
    • (1996) Genes Dev. , vol.10 , pp. 1233-1246
    • Lee, M.S.1    Henry, M.2    Silver, P.A.3
  • 35
    • 0037071545 scopus 로고    scopus 로고
    • In vivo analysis of NHPX reveals a novel nucleolar localization pathway involving a transient accumulation in splicing speckles
    • Leung, A.K. and Lamond, A.I. (2002) In vivo analysis of NHPX reveals a novel nucleolar localization pathway involving a transient accumulation in splicing speckles. J. Cell Biol. 157, 615-629.
    • (2002) J. Cell Biol. , vol.157 , pp. 615-629
    • Leung, A.K.1    Lamond, A.I.2
  • 36
    • 0030337963 scopus 로고    scopus 로고
    • Characterization of a novel arginine/serine-rich splicing factor in Arabidopsis
    • Lopato, S., Waigmann, E. and Barta, A. (1996) Characterization of a novel arginine/serine-rich splicing factor in Arabidopsis. Plant Cell, 8, 2255-2264.
    • (1996) Plant Cell , vol.8 , pp. 2255-2264
    • Lopato, S.1    Waigmann, E.2    Barta, A.3
  • 37
    • 0033561378 scopus 로고    scopus 로고
    • atSRp30, one of two SF2/ASF-like proteins from Arabidopsis thaliana, regulates splicing of specific plant genes
    • Lopato, S., Kalyna, M., Dorner, S., Kobayashi, R., Krainer, A.R. and Barta, A. (1999) atSRp30, one of two SF2/ASF-like proteins from Arabidopsis thaliana, regulates splicing of specific plant genes. Genes Dev. 13, 987-1001.
    • (1999) Genes Dev. , vol.13 , pp. 987-1001
    • Lopato, S.1    Kalyna, M.2    Dorner, S.3    Kobayashi, R.4    Krainer, A.R.5    Barta, A.6
  • 38
  • 39
    • 0343593691 scopus 로고    scopus 로고
    • Nuclear pre-mRNA compartmentalization: Trafficking of released transcripts to splicing factor reservoirs
    • Melcak, I., Cermanova, S., Jirsova, K., Koberna, K., Malinsky, J. and Raska, I. (2000) Nuclear pre-mRNA compartmentalization: trafficking of released transcripts to splicing factor reservoirs. Mol. Biol. Cell, 11, 497-510.
    • (2000) Mol. Biol. Cell , vol.11 , pp. 497-510
    • Melcak, I.1    Cermanova, S.2    Jirsova, K.3    Koberna, K.4    Malinsky, J.5    Raska, I.6
  • 40
    • 0034083175 scopus 로고    scopus 로고
    • Cell biology of transcription and pre-mRNA splicing: Nuclear architecture meets nuclear function
    • Misteli, T. (2000) Cell biology of transcription and pre-mRNA splicing: nuclear architecture meets nuclear function. J. Cell Sci. 113, 1841-1849.
    • (2000) J. Cell Sci. , vol.113 , pp. 1841-1849
    • Misteli, T.1
  • 41
    • 0030959371 scopus 로고    scopus 로고
    • Distribution of pre-mRNA splicing factors at sites of RNA polymerase II transcription
    • Neugebauer, K.M. and Roth, M.B. (1997) Distribution of pre-mRNA splicing factors at sites of RNA polymerase II transcription. Genes Dev. 11, 1148-1159.
    • (1997) Genes Dev. , vol.11 , pp. 1148-1159
    • Neugebauer, K.M.1    Roth, M.B.2
  • 42
    • 0034193778 scopus 로고    scopus 로고
    • The nucleolus: An old factory with unexpected capabilities
    • Olson, M.O., Dundr, M. and Szebeni, A. (2000) The nucleolus: an old factory with unexpected capabilities. Trends Cell Biol. 10, 189-196.
    • (2000) Trends Cell Biol. , vol.10 , pp. 189-196
    • Olson, M.O.1    Dundr, M.2    Szebeni, A.3
  • 43
    • 0032169650 scopus 로고    scopus 로고
    • The plurifunctional nucleolus
    • Pederson, T. (1998) The plurifunctional nucleolus. Nucleic Acids Res. 26, 3871-3876.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 3871-3876
    • Pederson, T.1
  • 44
    • 0034611785 scopus 로고    scopus 로고
    • High mobility of proteins in the mammalian cell nucleus
    • Phair, R.D. and Misteli, T. (2000) High mobility of proteins in the mammalian cell nucleus. Nature, 404, 604-609.
    • (2000) Nature , vol.404 , pp. 604-609
    • Phair, R.D.1    Misteli, T.2
  • 46
    • 0037339967 scopus 로고    scopus 로고
    • Sequential entry of components of the gene expression machinery into daughter nuclei
    • Prasanth, K.V., Sacco-Bubulya, P.A., Prasanth, S.G. and Spector, D.L. (2003) Sequential entry of components of the gene expression machinery into daughter nuclei. Mol. Biol. Cell, 14, 1043-1057.
    • (2003) Mol. Biol. Cell , vol.14 , pp. 1043-1057
    • Prasanth, K.V.1    Sacco-Bubulya, P.A.2    Prasanth, S.G.3    Spector, D.L.4
  • 47
    • 0035212996 scopus 로고    scopus 로고
    • Nuclear pre-mRNA splicing in plants
    • Reddy, A.S.N. (2001) Nuclear pre-mRNA splicing in plants. Crit. Rev. Plant Sci. 20, 523-571.
    • (2001) Crit. Rev. Plant Sci. , vol.20 , pp. 523-571
    • Reddy, A.S.N.1
  • 48
    • 0028968684 scopus 로고
    • Yeast Nop3p has structural and functional similarities to mammalian pre-mRNA binding proteins
    • Russell, I. and Tollervey, D. (1995) Yeast Nop3p has structural and functional similarities to mammalian pre-mRNA binding proteins. Eur. J. Cell Biol. 66, 293-301.
    • (1995) Eur. J. Cell Biol. , vol.66 , pp. 293-301
    • Russell, I.1    Tollervey, D.2
  • 49
    • 0037017406 scopus 로고    scopus 로고
    • Disassembly of interchromatin granule clusters alters the coordination of transcription and pre-mRNA splicing
    • Sacco-Bubulya, P. and Spector, D.L. (2002) Disassembly of interchromatin granule clusters alters the coordination of transcription and pre-mRNA splicing. J. Cell Biol. 156, 425-436.
    • (2002) J. Cell Biol. , vol.156 , pp. 425-436
    • Sacco-Bubulya, P.1    Spector, D.L.2
  • 50
    • 0033998566 scopus 로고    scopus 로고
    • The ethylene-inducible PK12 kinase mediates the phosphorylation of SR splicing factors
    • Savaldi-Goldstein, S., Sessa, G. and Fluhr, R. (2000) The ethylene-inducible PK12 kinase mediates the phosphorylation of SR splicing factors. Plant J. 21, 91-96.
    • (2000) Plant J. , vol.21 , pp. 91-96
    • Savaldi-Goldstein, S.1    Sessa, G.2    Fluhr, R.3
  • 52
    • 1142310938 scopus 로고    scopus 로고
    • Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock
    • Shin, C., Feng, Y. and Manley, J.L. (2004) Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock. Nature, 427, 553-558.
    • (2004) Nature , vol.427 , pp. 553-558
    • Shin, C.1    Feng, Y.2    Manley, J.L.3
  • 53
    • 0026014804 scopus 로고
    • An efficient method for isolation of RNA from tissue cultured plant cells
    • Shirzadegan, M., Christie, P. and Seemann, J.R. (1991) An efficient method for isolation of RNA from tissue cultured plant cells. Nucleic Acids Res. 19, 6055.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 6055
    • Shirzadegan, M.1    Christie, P.2    Seemann, J.R.3
  • 54
    • 0035207924 scopus 로고    scopus 로고
    • Dynamic targeting of protein phosphatase 1 within the nuclei of living mammalian cells
    • Trinkle-Mulcahy, L., Sleeman, J.E. and Lamond, A.I. (2001) Dynamic targeting of protein phosphatase 1 within the nuclei of living mammalian cells. J. Cell Sci. 114, 4219-4228.
    • (2001) J. Cell Sci. , vol.114 , pp. 4219-4228
    • Trinkle-Mulcahy, L.1    Sleeman, J.E.2    Lamond, A.I.3
  • 55
    • 0344654761 scopus 로고    scopus 로고
    • Phosphorylation regulates in vivo interaction and molecular targeting of serine/arginine-rich pre-mRNA splicing factors
    • Yeakley, J.M., Tronchere, H., Olesen, J., Dyck, J.A., Wang, H.Y. and Fu, X.D. (1999) Phosphorylation regulates in vivo interaction and molecular targeting of serine/arginine-rich pre-mRNA splicing factors. J. Cell Biol. 145, 447-455.
    • (1999) J. Cell Biol. , vol.145 , pp. 447-455
    • Yeakley, J.M.1    Tronchere, H.2    Olesen, J.3    Dyck, J.A.4    Wang, H.Y.5    Fu, X.D.6
  • 56
    • 4444230597 scopus 로고    scopus 로고
    • Nucleolar localization of the human telomeric repeat binding factor 2 (TRF2)
    • Zhang, S., Hemmerich, P. and Grosse, F. (2004) Nucleolar localization of the human telomeric repeat binding factor 2 (TRF2). J. Cell Sci. 117, 3935-3945.
    • (2004) J. Cell Sci. , vol.117 , pp. 3935-3945
    • Zhang, S.1    Hemmerich, P.2    Grosse, F.3


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