Application of fluorescence-based resistance gene analog analysis for genotyping plant genetic resources

Biotechnology Letters

Volumn 27, Issue 2, 2005, Pages 83-89

  Cheng, Jianping ^a   Yan, Jun ^a   Krugman, Tamar ^a   Fahima, Tzion ^a  

^a UNIVERSITY OF HAIFA   (Israel)

Author keywords

DNA fingerprinting; Fluorescence based fragment analysis; Resistance gene analog

Indexed keywords

CHEMICAL MODIFICATION; COMPUTER SOFTWARE; DISEASES; DNA; FLUORESCENCE; PLANTS (BOTANY); RADIOACTIVE ELEMENTS;

GENOTYPING; NATURAL POPULATIONS; RADIOACTIVE LABELING; RESISTANCE GENE ANALOGS (RGA);

GENES;

ARTICLE; DIAGNOSTIC PROCEDURE; DNA SEQUENCE; FLUORESCENCE; GENE; GENETIC MARKER; GENETIC PREDISPOSITION; GENETICS; INSTRUMENTATION; METHODOLOGY; PHYLOGENY; PLANT; PLANT DISEASE; POPULATION GENETICS; TWO DIMENSIONAL GEL ELECTROPHORESIS; WHEAT;

ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; FLUORESCENCE; GENES, PLANT; GENETIC MARKERS; GENETIC PREDISPOSITION TO DISEASE; GENETICS, POPULATION; MOLECULAR DIAGNOSTIC TECHNIQUES; PHYLOGENY; PLANT DISEASES; PLANTS; SEQUENCE ANALYSIS, DNA; TRITICUM;

TRITICUM AESTIVUM; TRITICUM TURGIDUM SUBSP. DICOCCOIDES;

EID: 14644422254     PISSN: 01415492     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10529-004-6933-2     Document Type: Article

References (15)

1. Chen XM, Line RF, Leung H (1998) Genome scanning for resistance-gene analogs in rice, barley and wheat by high-resolution electrophoresis. Theor. Appl. Genet. 97: 345-355.
2. DeHaan LR, Antonides R, Belina K, Ehlke NJ (2002) Peakmatcher: software for semi-automated fluorescence-based AFLP. Crop Sci. 42: 1361-1364.
3. Fahima T, Röder MS, Wendehake K, Kirzhner VM, Nevo E (2002) Microsatellite polymorphism in natural populations of wild emmer wheat, Triticum dicoccoides, in Israel. Theor. Appl. Genet. 104: 17-29.
4. Huang JC, Sun M (1999) A modified AFLP with fluorescence-labelled primers and automated DNA sequencer detection for efficient fingerprinting analysis in plants. Biotechnol. Tech. 13: 277-278.
5. Hulbert SH, Webb CA, Smith SM, Sun Q (2001) Resistance gene complexes: evolution and utilization. Annu. Rev. Phytopathol. 39: 285-312.
6. Leister D, Ballvora A, Salamini F, Gebhardt C (1996). A PCR based approach for isolating pathogen resistance genes from potato with potential for wide application in plant. Nat. Genet. 14: 421-429.
7. Nevo E (2001) Evolution of genome-phenome diversity under environmental stress. Proc. Natl. Acad. Sci. USA 98: 6233-6240.
8. Nevo E, Korol AB, Beiles A, Fahima T (2002) Evolution of Wild Emmer and Wheat Improvement. Berlin: Springer-Verlag. ISBN 3-540-41750-8.
9. Peng JH, Fahima T, Röder MS, Li YC, Dahan A, Grama A, Ronin YI, Korol AB, Nevo E (1999) Microsatellite tagging of stripe-rust resistance gene YrH52 derived from wild emmer wheat, Triticum dicoccoide, and suggestive negative crossover interference on chromosome 1B. Theor. Appl. Genet. 98: 862-872.
10. Peng JH, Ronin YI, Fahinia T, Röder MS, Li YC, Nevo E, Korol AB (2003) Domestication quantitative trait loci in Triticum dicoccoides, the progenitor of wheat. Proc. Natl. Acad. Sci. USA 100: 2489-2494.
11. Röder MS, Korzun V, Wendehake K, Plaschke J, Tixier MH, Leroy P, Ganal MW (1998) A microsatellite map of wheat. Genetics 149: 2007-2023.
12. Schwarz G, Herz M, Huang XQ, Michalek W, Jahoor A, Wenzel G, Mohler V (2000) Application of fluorescence-based semi-automated AFLP analysis in barley and wheat. Theor. Appl. Genet. 100: 545-551.
13. Staskawicz BJ, Ausubel FM, Baker BJ, Ellis JG, Jones JDG (1995) Molecular genetics of plant disease resistance. Science 268: 661-667.
14. Yeh FC, Yang RC, Boyle T, Ye ZH, Mao JX (1977) POPGENE, the user-friendly shareware for population genetic analysis. Canada: Molecular Biology and Biotechnology Center, University of Alberta.
15. Yu YG, Buss GR, Maroof MA (1996) Isolation of a superfamily of candidate disease resistance genes in soybean based on a conserved nucleotide-binding site. Proc. Natl. Acad. Sci. USA 93: 11751-11756.