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Volumn 22, Issue 3, 2005, Pages 383-386

Selenoproteins and the metabolic features of the archaeal ancestor of eukaryotes

Author keywords

Archaea; Crenarchaeote; Hydrogen hypothesis; Methanogen; Origin of life; Sulfur

Indexed keywords

METHANE; SELENOPROTEIN; SULFUR; TRANSFER RNA;

EID: 14544304733     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/molbev/msi007     Document Type: Article
Times cited : (15)

References (30)
  • 1
    • 0029819318 scopus 로고    scopus 로고
    • The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny
    • Baldauf, S. L., J. D. Palmer, and W. F. Doolittle. 1996. The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny. Proc. Natl. Acad. Sci. USA 93:7749-7754.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 7749-7754
    • Baldauf, S.L.1    Palmer, J.D.2    Doolittle, W.F.3
  • 2
    • 0032102006 scopus 로고    scopus 로고
    • Transcription and translation in Archaea: A mosaic of eukaryal and bacterial features
    • Bell, S. D., and S. P. Jackson. 1998. Transcription and translation in Archaea: a mosaic of eukaryal and bacterial features. Trends Microbiol. 6:222-228.
    • (1998) Trends Microbiol. , vol.6 , pp. 222-228
    • Bell, S.D.1    Jackson, S.P.2
  • 3
    • 0025743489 scopus 로고
    • Recognition of UGA as a selenocysteine codon in type I deiodinase requires sequences in the 3′ untranslated region
    • Berry, M. J., L. Banu, Y. Y. Chen, S. J. Mandel, J. D. Kieffer, J. W. Harney, and P. R. Larsen. 1991. Recognition of UGA as a selenocysteine codon in type I deiodinase requires sequences in the 3′ untranslated region. Nature 353:273-276.
    • (1991) Nature , vol.353 , pp. 273-276
    • Berry, M.J.1    Banu, L.2    Chen, Y.Y.3    Mandel, S.J.4    Kieffer, J.D.5    Harney, J.W.6    Larsen, P.R.7
  • 4
    • 1842861791 scopus 로고    scopus 로고
    • Horizontal gene transfer and archaeal origin of deoxyhypusine synthase homologous genes in bacteria
    • Brochier, C., P. Lopez-Garcia, and D. Moreira. 2004. Horizontal gene transfer and archaeal origin of deoxyhypusine synthase homologous genes in bacteria. Gene 330:169-176.
    • (2004) Gene , vol.330 , pp. 169-176
    • Brochier, C.1    Lopez-Garcia, P.2    Moreira, D.3
  • 5
    • 0033520478 scopus 로고    scopus 로고
    • Purification, redox sensitivity, and RNA binding properties of SECIS-binding protein 2, a protein involved in selenoprotein biosynthesis
    • Copeland, P. R., and D. M. Driscoll. 1999. Purification, redox sensitivity, and RNA binding properties of SECIS-binding protein 2, a protein involved in selenoprotein biosynthesis. J. Biol. Chem. 274:25447-25454.
    • (1999) J. Biol. Chem. , vol.274 , pp. 25447-25454
    • Copeland, P.R.1    Driscoll, D.M.2
  • 6
    • 0034850212 scopus 로고    scopus 로고
    • Distinctive features in the SelB family of elongation factors for selenoprotein synthesis. A glimpse of an evolutionary complexified translation apparatus
    • Fagegaltier, D., P. Carbon, and A. Krol. 2001. Distinctive features in the SelB family of elongation factors for selenoprotein synthesis. A glimpse of an evolutionary complexified translation apparatus. Biofactors 14:5-10.
    • (2001) Biofactors , vol.14 , pp. 5-10
    • Fagegaltier, D.1    Carbon, P.2    Krol, A.3
  • 7
    • 0034282536 scopus 로고    scopus 로고
    • Characterization of mSelB, a novel mammalian elongation factor for selenoprotein translation
    • Fagegaltier, D., N. Hubert, K. Yamada, T. Mizutani, P. Carbon, and A. Krol. 2000. Characterization of mSelB, a novel mammalian elongation factor for selenoprotein translation. EMBO J. 19:4796-4805.
    • (2000) EMBO J. , vol.19 , pp. 4796-4805
    • Fagegaltier, D.1    Hubert, N.2    Yamada, K.3    Mizutani, T.4    Carbon, P.5    Krol, A.6
  • 8
    • 12644288347 scopus 로고    scopus 로고
    • Identification of a novel selD homolog from eukaryotes, bacteria, and archaea: Is there an autoregulatory mechanism in selenocysteine metabolism?
    • Guimaraes, M. J., D. Peterson, A. Vicari et al. (11 co-authors). 1996. Identification of a novel selD homolog from eukaryotes, bacteria, and archaea: is there an autoregulatory mechanism in selenocysteine metabolism? Proc. Natl. Acad. Sci. USA 93: 15086-15091.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 15086-15091
    • Guimaraes, M.J.1    Peterson, D.2    Vicari, A.3
  • 9
    • 0026755739 scopus 로고
    • Methanococcus voltae harbors four gene clusters potentially encoding two [NiFe] and two [NiFeSe] hydrogenases, each of the cofactor F420-reducing or F420-non-reducing types
    • Halboth, S., and A. Klein. 1992. Methanococcus voltae harbors four gene clusters potentially encoding two [NiFe] and two [NiFeSe] hydrogenases, each of the cofactor F420-reducing or F420-non-reducing types. Mol. Gen. Genet. 233:217-224.
    • (1992) Mol. Gen. Genet. , vol.233 , pp. 217-224
    • Halboth, S.1    Klein, A.2
  • 10
    • 0036094506 scopus 로고    scopus 로고
    • How selenium has altered our understanding of the genetic code
    • Hatfield, D. L., and V. N. Gladyshev. 2002. How selenium has altered our understanding of the genetic code. Mol. Cell. Biol. 22:3565-3576.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 3565-3576
    • Hatfield, D.L.1    Gladyshev, V.N.2
  • 11
    • 0031667182 scopus 로고    scopus 로고
    • The 9/4 secondary structure of eukaryotic selenocysteine tRNA: More pieces of evidence
    • Hubert, N., C. Sturchler, E. Westhof, P. Carbon, and A. Krol. 1998. The 9/4 secondary structure of eukaryotic selenocysteine tRNA: more pieces of evidence. RNA 4:1029-1033.
    • (1998) RNA , vol.4 , pp. 1029-1033
    • Hubert, N.1    Sturchler, C.2    Westhof, E.3    Carbon, P.4    Krol, A.5
  • 12
    • 0034039808 scopus 로고    scopus 로고
    • Evolution of the eukaryotic translation termination system: Origins of release factors
    • Inagaki, Y., and W. F. Doolittle. 2000. Evolution of the eukaryotic translation termination system: origins of release factors. Mol. Biol. Evol. 17:882-889.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 882-889
    • Inagaki, Y.1    Doolittle, W.F.2
  • 13
    • 0032415904 scopus 로고    scopus 로고
    • Evolutionary relationship between translation initiation factor eIF-2gamma and selenocysteine-specific elongation factor SELB: Change of function in translation factors
    • Keeling, P. J., N. M. Fast, and G. I. McFadden. 1998. Evolutionary relationship between translation initiation factor eIF-2gamma and selenocysteine-specific elongation factor SELB: change of function in translation factors. J. Mol. Evol. 47:649-655.
    • (1998) J. Mol. Evol. , vol.47 , pp. 649-655
    • Keeling, P.J.1    Fast, N.M.2    McFadden, G.I.3
  • 15
    • 2942546160 scopus 로고    scopus 로고
    • The prokaryotic selenoproteome
    • Kryukov, G. V., and V. N. Gladyshev. 2004. The prokaryotic selenoproteome. EMBO Rep 5:538-543.
    • (2004) EMBO Rep. , vol.5 , pp. 538-543
    • Kryukov, G.V.1    Gladyshev, V.N.2
  • 16
    • 0032584201 scopus 로고    scopus 로고
    • Archaeal translation initiation revisited: The initiation factor 2 and eukaryotic initiation factor 2B alpha-beta-delta subunit families
    • Kyrpides, N. C., and C. R. Woese. 1998. Archaeal translation initiation revisited: the initiation factor 2 and eukaryotic initiation factor 2B alpha-beta-delta subunit families. Proc. Natl. Acad. Sci. USA 95:3726-3730.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 3726-3730
    • Kyrpides, N.C.1    Woese, C.R.2
  • 17
    • 0030854739 scopus 로고    scopus 로고
    • tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    • Lowe, T. M., and S. R. Eddy. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 18
    • 0037126612 scopus 로고    scopus 로고
    • A dynamic competition between release factor 2 and the tRNA(Sec) decoding UGA at the receding site of Escherichia coli formate dehydrogenase H
    • Mansell, J. B., D. Guevremont, E. S. Poole, and W. P. Tate. 2001. A dynamic competition between release factor 2 and the tRNA(Sec) decoding UGA at the receding site of Escherichia coli formate dehydrogenase H. Embo. J. 20:7284-7293.
    • (2001) Embo. J. , vol.20 , pp. 7284-7293
    • Mansell, J.B.1    Guevremont, D.2    Poole, E.S.3    Tate, W.P.4
  • 19
    • 2642689666 scopus 로고    scopus 로고
    • The hydrogen hypothesis for the first eukaryote
    • Martin, W., and M. Muller. 1998. The hydrogen hypothesis for the first eukaryote. Nature 392:37-41.
    • (1998) Nature , vol.392 , pp. 37-41
    • Martin, W.1    Muller, M.2
  • 20
    • 0031735879 scopus 로고    scopus 로고
    • Symbiosis between methanogenic archaea and delta-proteobacteria as the origin of eukaryotes: The syntrophic hypothesis
    • Moreira, D., and P. Lopez-Garcia. 1998. Symbiosis between methanogenic archaea and delta-proteobacteria as the origin of eukaryotes: the syntrophic hypothesis. J. Mol. Evol. 47:517-530.
    • (1998) J. Mol. Evol. , vol.47 , pp. 517-530
    • Moreira, D.1    Lopez-Garcia, P.2
  • 22
    • 0026684272 scopus 로고
    • Evidence that eukaryotes and eocyte prokaryotes are immediate relatives
    • Rivera, M. C., and J. A. Lake. 1992. Evidence that eukaryotes and eocyte prokaryotes are immediate relatives. Science 257:74-76.
    • (1992) Science , vol.257 , pp. 74-76
    • Rivera, M.C.1    Lake, J.A.2
  • 24
    • 0034595505 scopus 로고    scopus 로고
    • Identification and characterisation of the selenocysteine-specific translation factor SelB from the archaeon Methanococcus jannaschii
    • Rother, M., R. Wilting, S. Commans, and A. Bock. 2000. Identification and characterisation of the selenocysteine-specific translation factor SelB from the archaeon Methanococcus jannaschii. J. Mol. Biol. 299:351-358.
    • (2000) J. Mol. Biol. , vol.299 , pp. 351-358
    • Rother, M.1    Wilting, R.2    Commans, S.3    Bock, A.4
  • 25
    • 0027233609 scopus 로고
    • A novel very small subunit of a selenium containing [NiFe] hydrogenase of Methanococcus voltae is postranslationally processed by cleavage at a defined position
    • Sorgenfrei, O., D. Linder, M. Karas, and A. Klein. 1993. A novel very small subunit of a selenium containing [NiFe] hydrogenase of Methanococcus voltae is postranslationally processed by cleavage at a defined position. Eur. J. Biochem. 213:1355-1358.
    • (1993) Eur. J. Biochem. , vol.213 , pp. 1355-1358
    • Sorgenfrei, O.1    Linder, D.2    Karas, M.3    Klein, A.4
  • 27
    • 0034886919 scopus 로고    scopus 로고
    • Classification and phylogeny of hydrogenases
    • Vignais, P. M., B. Billoud, and J. Meyer. 2001. Classification and phylogeny of hydrogenases. FEMS Microbiol. Rev. 25:455-501.
    • (2001) FEMS Microbiol. Rev. , vol.25 , pp. 455-501
    • Vignais, P.M.1    Billoud, B.2    Meyer, J.3
  • 28
    • 0031017621 scopus 로고    scopus 로고
    • A selenium-dependent and a selenium-independent formylmethanofuran dehydrogenase and their transcriptional regulation in the hyperthermophilic Methanopyrus kandleri
    • Vorholt, J. A., M. Vaupel, and R. K. Thauer. 1997. A selenium-dependent and a selenium-independent formylmethanofuran dehydrogenase and their transcriptional regulation in the hyperthermophilic Methanopyrus kandleri. Mol. Microbiol. 23:1033-1042.
    • (1997) Mol. Microbiol. , vol.23 , pp. 1033-1042
    • Vorholt, J.A.1    Vaupel, M.2    Thauer, R.K.3
  • 29
    • 0031557397 scopus 로고    scopus 로고
    • Selenoprotein synthesis in archaea: Identification of an mRNA element of Methanococcus jannaschii probably directing selenocysteine insertion
    • Wilting, R., S. Schorling, B. C. Persson, and A. Bock. 1997. Selenoprotein synthesis in archaea: identification of an mRNA element of Methanococcus jannaschii probably directing selenocysteine insertion. J. Mol. Biol. 266:637-641.
    • (1997) J. Mol. Biol. , vol.266 , pp. 637-641
    • Wilting, R.1    Schorling, S.2    Persson, B.C.3    Bock, A.4
  • 30
    • 0025341614 scopus 로고
    • Features of the formate dehydrogenase mRNA necessary for decoding of the UGA codon as selenocysteine
    • Zinoni, F., J. Heider, and A. Bock. 1990. Features of the formate dehydrogenase mRNA necessary for decoding of the UGA codon as selenocysteine. Proc. Natl. Acad. Sci. USA 87: 4660-4664.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 4660-4664
    • Zinoni, F.1    Heider, J.2    Bock, A.3


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