Estimation of the proton affinity values of fifteen matrix-assisted laser desorption/ionization matrices under electrospray ionization conditions using the kinetic method

Journal of the American Society for Mass Spectrometry

Volumn 15, Issue 3, 2004, Pages 431-435

  Mirza, Shama Parveen ^a   Raju, N Prasada ^a   Vairamani, M ^a  

^a INDIAN INSTITUTE OF CHEMICAL TECHNOLOGY   (India)

Author keywords

[No Author keywords available]

Indexed keywords

DESORPTION; IONIZATION; KINETIC THEORY; LASERS; NEGATIVE IONS; PROTONS;

ELECTROSPRAY IONIZATION; LASER DESORPTION/IONIZATION MATRICES;

MASS SPECTROMETRY;

3 CHLOROALANINE; 4 AMINOPYRIDINE; 4 NITROANILINE; ACETAMIDE; ACETOPHENONE; AMINOPYRIDINE; AMMONIA; ANILINE DERIVATIVE; ANION; BENZALDEHYDE; BETA CYCLODEXTRIN; BUTYLAMINE; GAMMA BUTYROLACTONE; ION; PICOLINE DERIVATIVE; PROPYLAMINE; PROTON; PYRIDINE DERIVATIVE; TOLUIDINE DERIVATIVE; TRIETHYLAMINE;

MASS SPECTROMETRY;

ACCURACY; ANALYTIC METHOD; ARTICLE; BINDING AFFINITY; CHEMICAL REACTION KINETICS; DESORPTION; ELECTROSPRAY; MASS SPECTROMETER; MATRIX ASSISTED LASER DESORPTION IONIZATION; MEASUREMENT;

EID: 1442284500     PISSN: 10440305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jasms.2003.12.001     Document Type: Article

References (49)

1. Karas M., Bachmann D., Hillenkamp F. Influence of the Wavelength in High-Irradiance Ultraviolet Laser Desorption Mass Spectrometry of Organic Molecules. Anal. Chem. 57:1985;2935-2939.
2. Karas M., Hillenkamp F. Laser Desorption Ionization of Proteins with Molecular Masses Exceeding 10,000 Daltons. Anal. Chem. 60:1987;2299-2301.
3. Karas M., Bachmann D., Bahr U., Hillenkamp F. Matrix-Assisted Ultraviolet Laser Desorption of Non-volatile Compounds. Int. J. Mass Spectrom. Ion Processes. 78:1987;53-68.
4. Yamashita M., Fenn J.B. Negative Ion Production with the Electrospray Ion Source. J. Phys. Chem. 88:1984;4671-4675.
5. Overberg A., Karas M., Bahr U., Kaufmann R., Hillenkamp F. Matrix-Assisted Infrared-Laser (2.49 μm) Desorption Ionization Mass Spectrometry of Large Biomolecules. Rapid Commun. Mass Spectrom. 4:1990;293.
6. Tanaka K., Waki H., Ido Y., Akita S., Yoshida Y., Yoshida T. Protein and Polymer Analysis of up to m/z 100,000 by Laser Ionization Time-of-Flight Mass Spectrometry. Rapid Commun. Mass Spectrom. 2:1988;151-156.
7. Beavis R.C., Chait B.T. High-Accuracy Molecular Mass Determination of Proteins Using Matrix-Assisted Laser Desorption Mass Spectrometry. Anal. Chem. 62:1990;1836-1840.
8. Hillenkamp F., Karas M., Beavis R.C., Chait B.T. MALDI-MS of Biopolymers. Anal. Chem. 63:1991;1193A-1198A.
9. Beavis R.C., Chait B.T. Factors Affecting the Ultraviolet Laser Desorption of Proteins. Rapid Commun. Mass Spectrom. 3:1989;233-237.
10. Strupat K., Karas M., Hillenkamp F. 2, 5-Dihydroxybenzoic Acid, a New Matrix for Laser Desorption-Ionization Mass Spectrometry. Int. J. Mass Spectrom. Ion Processes. 111:1991;89-102.
11. Beavis R.C., Chait B.T. A Rapid Sensitive Analysis of Protein Mixtures by Mass Spectrometry. Proc. Nat. Acad. Sci. U.S.A. 87:1990;6873-6878.
12. Nordhoff E. Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry as a New Method for the Characterization of Nucleic Acids. Trends Anal. Chem. 15:1996;240-250.
13. Nordhoff E., Kirpekar F., Roepstorff P. Mass Spectrometry of Nucleic Acids. Mass Spectrom. Rev. 15:1996;67-138.
14. Stahl B., Steup M., Karas M., Hillenkamp F. Analysis of Neutral Oligosaccharides by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry. Anal. Chem. 63:1991;1463-1466.
15. Huberty M.C., Vath J.E., Yu W., Martin S.A. Site-Specific Carbohydrate Identification in Recombinant Proteins Using MALDI-TOF MS. Anal. Chem. 65:1993;2791-2796.
16. Harvey D.J. Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry of Carbohydrates. Mass Spectrom. Rev. 18:1999;349-451.
17. Danis P.O., Kerr D.E., Mayer F., Holle A., Watson C.H. The Analysis of Water Soluble Polymers by MALDI-TOF MS. Org. Mass Spectrom. 27:1992;843-846.
18. Bahr V., Deppe A., Karas M., Hillenkamp F. Mass Spectrometry of Synthetic Polymers by UV-Matrix-Assisted Laser Desorption/Ionization. Anal. Chem. 64:1994;2866-2870.
19. Cotterll J.S., Koerner M., Gerhards R. The Characterization of Syntheitc Polymers by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry. Rapid Commun. Mass Spectrom. 9:1995;1562-1564.
20. Larsen B.S., Simonsick W.J. Jr., McEwen C.N. Fundamentals of the Application of Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry to Low Mass Poly (Methylmethacrylate) Polymers. J. Am. Soc. Mass Spectrom. 7:1996;287-292.
21. Nielen M.W.F. MALDI Time-of-Flight Mass Spectrometry of Synthetic Polymers. Mass Spectrom. Rev. 18:1999;309-344.
22. Bokelmann V., Spengler B., Kaufmann R. Dynamical Parameters of Ion Ejection and Ion Formation in Matrix-Assisted Laser Desorption/Ionization. Eur. Mass Spectrom. 1:1995;81-93.
23. Spengler B., Karas M., Bahr U., Hillenkamp F. Excimer Laser Desorption Mass Spectrometry of Biomolecules at 248 and 193 nm. J. Phys. Chem. 91:1987;6502-6506.
24. Zhou J., Ens W., Standing K.G., Verentchikov A. Kinetic Energy Measurements of Molecular Ions Ejected into an Electric Field by Matrix-Assisted Laser Desorption. Rapid Commun. Mass Spectrom. 6:1992;671.
25. Knochenmuss R., Dubois F., Dale M.J., Zenobi R. Rapid Commun. Mass Spectrom. 10:1996;871-877.
26. + Ions of Small Peptides and Some Mechanistic Comments. J. Mass Spectrom. 30:1995;408-423.
27. Ehring H., Karas M., Hillenkamp F. Role of Photoionization and Photochemistry in Ionization Processes of Organic Molecules and Relevance for MALDI-MS. Org. Mass Spectrom. 27:1992;472-480.
28. Knochenmuss R., Zenobi R. MALDI Ionization The Role of In-Plume Processes. Chem. Rev. 103:2003;441-452.
29. Knochenmuss R. A Quantitative Model of Ultraviolet Matrix-Assisted Laser Desorption/Ionization Including Analyte Ion Generation. Anal. Chem. 75:2003;2199-2207.
30. Zenobi R., Knochenmuss R. Ion Formation in MALDI Mass Spectrometry. Mass Spectrom. Rev. 17:1998;337-366.
31. Jorgensen T.J.D., Bojesen G., Nielsen H.R. The Proton Affinities of Seven Matrix-Assisted Laser Desorption/Ionization Matrices Correlated with the Formation of Multiply Charged Ions. Eur. Mass Spectrom. 4:1998;31-45.
32. Burton R.D., Watson C.H., Eyler J.R., Lang G.L., Powell D.H., Avery M.Y. Proton Affinities of Eight Matrices Used for Matrix-Assisted Laser Desorption/Ionization. Rapid Commun. Mass Spectrom. 11:1997;443-446.
33. Nelson C.M., Zhu L., Tang W., Smith L.M., Crellin K., Berry J., Beauchamp J.L. Fragmentation Mechanisms of Oligonucleotides in MALDI Mass Spectrometry. SPIE. 2680:1996;247-255.
34. Steenvoorden R.J.J.M., Breuker K., Zenobi R. The Gas-Phase Basicities of Matrix-Assisted Laser Desorption/Ionization Matrices. Eur. Mass Spectrom. 3:1997;339-346.
35. Brodbelt-Lustig J.S., Cooks R.G. Determination of Relative Gas-Phase Basicities by the Proton-Transfer Equilibrium Technique and the Kinetic Method in a Quadrupole Ion Trap. Talanta. 36:1989;255-260.
36. Cooks R.G., Kruger T.L. Intrinsic Basicity Determination Using Metastable Ions. J. Am. Chem. Soc. 99:1977;1279-1281.
37. Cooks R.G., Pratrick J.S., Kotiaho T., McLuckey A. Thermochemical Determinations by the Kinetic Method. Mass Spectrom. Rev. 13:1994;287-339.
38. McLuckey S.A., Cameron D., Cooks R.G. Proton Affinities from Dissociations of Proton-Bound Dimers. J. Am. Chem. Soc. 103:1981;1313-1317.
39. Cheng X., Wu Z., Fenselau C. Collision Energy Dependence of Proton-Bound Dimer Dissociation Entropy Effects, Proton Affinities. J. Am. Chem. Soc. 115:1993;4844-4848.
40. Nold M.J., Cerda B.A., Wesdemiotis C. Proton Affinities of the N- and C-Terminal Segments Arising Upon the Dissociation of the Amide Bond in Protonated Peptides. J. Am. Soc. Mass Spectrom. 10:1999;1-8.
41. Armentrout P.B. Entropy Measurements and the Kinetic Method A Statistically Meaningful Approach. J. Am. Soc. Mass Spectrom. 11:2000;371-379.
42. Cooks R.G., Wong P.S.H. Kinetic Method of Making Thermochemical Determinations Advances and Applications. Acc. Chem. Res. 31:1998;379-386.
43. Cooks R.G., Koskinen J.T., Thomas P.D. The Kinetic Method of Making Thermochemical Determinations. J. Mass Spectrom. 34:1999;85-92.
44. Hahn I., Wesdemiotis C. Protonation Thermochemistry of β-Alanine An Evaluation of Proton Affinities and Entropies Determined by the Extended Kinetic Method. Int. J. Mass Spectrom. 222:2003;465-479.
45. Raju N.P., Mirza S.P., Vairamani M. 5-Ethyl-2-Mercaptothiazole as Matrix for Matrix-Assisted Laser Desorption/Ionization of a Broad Spectrum of Analytes in Positive and Negative Ion Mode. Rapid Commun. Mass Spectrom. 15:2001;1879-1884.
46. Hunter E.P.L., Lias S.G. Evaluated Gas Phase Basicities and Proton Affinities of Molecules An Update. J. Phys. Chem. Ref. Data. 27:(3):1998;413-656.
47. Xu N., Huang Z.H., Watson J.T., Gage D.A. Mercaptobenzothiazoles A New Class of Matrices for Laser Desorption/Ionization Mass Spectrometry. J. Am. Soc. Mass Spectrom. 8:1996;116-124.
48. Nonami H., Tanaka K., Fukuyama Y., Erra-Balsells R. β-Carboline Alkaloids as Matrices for UV Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry in Positive and Negative Ion Modes. Analysis of Proteins of High Molecular Mass and of Cyclic and Acyclic Oligosaccharides. Rapid Commun. Mass Spectrom. 12:1998;285-296.
49. Cvetanovic R.J., Singleton D.L., Paraskevopoulos G. Evaluations of the Mean Values and Standard Errors of Rate Constants and Their Temperature Coefficients. J. Phys. Chem. 83:1979;50-60.