An exact algorithm for determining protein backbone structure from NH residual dipolar couplings

Proceedings of the 2003 IEEE Bioinformatics Conference, CSB 2003

Volumn , Issue , 2003, Pages 611-612

  Wang, L ^a   Mettu, R R ^a   Lilien, R ^a,b   Donald, B R ^a,c,d  

^a Dartmouth College   (United States)

^b DARTMOUTH MEDICAL SCHOOL   (United States)

^c Lamont Doherty Earth Observatory   (United States)

^d DARTMOUTH COLLEGE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATICS; COUPLINGS; POLYNOMIALS; PROTEINS;

DEPTH FIRST SEARCH; EXACT ALGORITHMS; NOVEL ALGORITHM; PEPTIDE PLANES; POLYNOMIAL EQUATION; PROTEIN BACKBONE; RESIDUAL DIPOLAR COUPLING (RDCS); RESIDUAL DIPOLAR COUPLINGS;

ALGORITHMS;

EID: 14044271710     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/CSB.2003.1227422     Document Type: Conference Paper

References (5)

1. A. C. Fowler, F. Tian, H. M. Al-Hashimi, and J. H. Prestegard. Rapid determination of protein folds using residual dipolar couplings. J. Mol. Biol., 304(3):447-460, 2000.
2. A. W. Giesen, S. W. Homans, and J. M. Brown. Determination of protein global folds using backbone residual dipolar coupling and long-range NOE restraints. J. Biomol. NMR, 25:63-71, 2003.
3. F. Tian, H. Valafar, and J. H. Prestegard. A dipolar coupling based strategy for simultaneous resonance assignment and structure determination of protein backbones. J. Am. Chem. Soc., 123(47):11791-11796, 2001.
4. S. Vijay-Kumar, C. E. Bugg, and W. J. Cook. Structure of ubiquitin refined at 1.8 Å resolution. J. Mol. Biol., 194:531-544, 1987.
5. W. J. Wedemeyer, C. A. Rohl, and H. A. Scheraga. Exact solutions for chemical bond orientations from residual dipolar couplings. J. Biomol. NMR, 22:137-151, 2002.