Function of the SmpB tail in transfer-messenger RNA translation revealed by a nucleus-encoded form

Journal of Biological Chemistry

Volumn 280, Issue 7, 2005, Pages 5503-5509

  Jacob, Yannick ^a   Sharkady, Stephen M ^a   Bhardwaj, Kanchan ^a,b   Sanda, Alina ^a   Williams, Kelly P ^a  

^a INDIANA UNIVERSITY   (United States)

^b TEXAS A AND M UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGAE; BACTERIA; ESCHERICHIA COLI; GENES; PROTEINS; RNA; SIGNAL ENCODING;

NUCLEAR GENOMES; PLASTID GENOMES; RIBOSOMES; STALLED BACTERIAL RIBOSOMES;

GENE TRANSFER;

BACTERIAL PROTEIN; MESSENGER RNA; PROTEIN SMPB; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; CELL NUCLEUS; CONTROLLED STUDY; DIATOM; ESCHERICHIA COLI; GENETIC CODE; GENOME; HYPOTHESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASTID; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN FUNCTION; PROTEIN TRANSPORT; RED ALGA; RIBOSOME; RNA SPLICING; RNA TRANSLATION; SIGNAL TRANSDUCTION;

ALGAE, RED; ALLELES; AMINO ACID SEQUENCE; AMINOACYLATION; CELL NUCLEUS; DIATOMS; ESCHERICHIA COLI; EUKARYOTIC CELLS; MOLECULAR SEQUENCE DATA; PROTEIN BIOSYNTHESIS; RIBOSOMES; RNA, BACTERIAL; RNA-BINDING PROTEINS; SEQUENCE DELETION;

ALGAE; BACILLARIOPHYTA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; RHODOPHYTA;

EID: 14044265657     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M409277200     Document Type: Article

References (34)

1. Keiler, K. C., Waller, P. R., and Sauer, R. T. (1996) Science 271, 990-993
2. Karzai, A. W., Susskind, M. M., and Sauer, R. T. (1999) EMBO J. 18, 3793-3799
3. Wiegert, T., and Schumann, W. (2001) J. Bacteriol. 183, 3885-3889
4. Barends, S., Karzai, A. W., Sauer, R. T., Wower, J., and Kraal, B. (2001) J. Mol. Biol. 314, 9-21
5. Dong, G., Nowakowski, J., and Hoffman, D. W. (2002) EMBO J. 21, 1845-1854
6. Someya, T., Nameki, N., Hosoi, H., Suzuki, S., Hatanaka, H., Fujii, M., Terada, T., Shirouzu, M., Inoue, Y., Shibata, T., Kuramitsu, S., Yokoyama, S., and Kawai, G. (2003) FEBS Lett. 535, 94-100
7. Gutmann, S., Haebel, P. W., Metzinger, L., Sutter, M., Felden, B., and Ban, N. (2003) Nature 424, 699-703
8. Barends, S., Wower, J., and Kraal, B. (2000) Biochemistry 39, 2652-2658
9. Shimizu, Y., and Ueda, T. (2002) FEBS Lett. 514, 74-77
10. Hanawa-Suetsugu, K., Takagi, M., Inokuchi, H., Himeno, H., and Muto, A. (2002) Nucleic Acids Res. 30, 1620-1629
11. Hallier, M., Ivanova, N., Rametti, A., Pavlov, M., Ehrenberg, M., and Felden, B. (2004) J. Biol. Chem. 279, 25978-25985
12. Williams, K. P. (2002) Nucleic Acids Res. 30, 179-182
13. Williams, K. P., and Bartel, D. P. (1998) Nucleic Acids Res. 26, 163-165
14. Gimple, O., and Schon, A. (2001) Biol. Chem. 382, 1421-1429
15. Kovach, M. E., Elzer, P. H., Hill, D. S., Robertson, G. T., Farris, M. A., Roop, R. M., II, and Peterson, K. M. (1995) Gene 166, 175-176
16. Roche, E. D., and Sauer, R. T. (1999) EMBO J. 18, 4579-4589
17. Williams, K. P., Martindale, K. A., and Bartel, D. P. (1999) EMBO J. 18, 5423-5433
18. Datsenko, K. A., and Wanner, B. L. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 6640-6645
19. Kao, C., Rudisser, S., and Zheng, M. (2001) Methods 23, 201-205
20. Reuven, N. B., and Deutscher, M. P. (1993) FASEB J. 7, 143-148
21. Shimizu, Y., Inoue, A., Tomari, Y., Suzuki, T., Yokogawa, T., Nishikawa, K., and Ueda, T. (2001) Nat. Biotechnol. 19, 751-755
22. Gueneau, P., Loiseux-de Goër, S., and Williams, K. P. (1999) Eur. J. Phycol. 34, 533-535
23. Armbrust, E. V. (2000) J. Phycol. 36, 942-946
24. Apt, K. E., Zaslavkaia, L., Lippmeier, J. C., Lang, M., Kilian, O., Wetherbee, R., Grossman, A. R., and Kroth, P. G. (2002) J. Cell Sci. 115, 4061-4069
25. Matsuzaki, M., Misumi, O., Shin, I. T., Maruyama, S., Takahara, M., Miyagishima, S. Y., Mori, T., Nishida, K., Yagisawa, F., Yoshida, Y., Nishimura, Y., Nakao, S., Kobayashi, T., Momoyama, Y., Higashiyama, T., Minoda, A., Sano, M., Nomoto, H., Oishi, K., Hayashi, H., Ohta, F., Nishizaka, S., Haga, S., Miura, S., Morishita, T., Kabeya, Y., Terasawa, K., Suzuki, Y., Ishii, Y., Asakawa, S., Takano, H., Ohta, N., Kuroiwa, H., Tanaka, K., Shimizu, N., Sugano, S., Sato, N., Nozaki, H., Ogasawara, N., Kohara, Y., and Kuroiwa, T. (2004) Nature 428, 653-657
26. Queneau de Novoa, P., and Williams, K. P. (2004) Nucleic Acids Res. 32, D104-D108
27. Jiang, F., Yi, L., Moore, M., Chen, M., Rohl, T., Van Wijk, K. J., De Gier, J. W., Henry, R., and Dalbey, R. E. (2002) J. Biol. Chem. 277, 19281-19288
28. Wall, M. K., Mitchenall, L. A., and Maxwell, A. (2004) Proc. Natl. Acad. Sci. U. S. A. 101, 7821-7826
29. Himeno, H., Sato, M., Tadaki, T., Fukushima, M., Ushida, C., and Muto, A. (1997) J. Mol. Biol. 268, 803-808
30. Wower, J., Zwieb, C.W., Hoffman, D. W., and Wower, I. K. (2002) Biochemistry 41, 8826-8836
31. Jacob, Y., Seif, E., Paquet, P. O., and Lang, B. F. (2004) RNA (N. Y.) 10, 605-614
32. Haebel, P. W., Gutmann, S., and Ban, N. (2004) Curr. Opin. Struct. Biol. 14, 58-65
33. Cuff, J. A., Clamp, M. E., Siddiqui, A. S., Finlay, M., and Barton, G. J. (1998) Bioinformatics 14, 892-893
34. Emanuelsson, O., Nielsen, H., Brunak, S., and von Heijne, G. (2000) J. Mol. Biol. 300, 1005-1016