Extracting characteristic patterns from genome - Wide expression data by non - Negative matrix factorization

Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004

Volumn , Issue , 2004, Pages 570-571

  Rao, Nini ^a   Yao, Dezhong ^a   Shepherd, Simon J ^b  

^a UNIVERSITY OF ELECTRONIC SCIENCE AND TECHNOLOGY OF CHINA   (China)

^b UNIVERSITY OF BRADFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; BIOASSAY; CELL CULTURE; CODES (SYMBOLS); COMPUTER SIMULATION; DATA PROCESSING; DATA REDUCTION; MATRIX ALGEBRA; OPTIMIZATION; ROBUSTNESS (CONTROL SYSTEMS); SIGNAL PROCESSING; VECTORS;

CELLULAR STATE; DATASETS; EIGENASSAY; NONNEGATIVE MATRIX FACTORIZATION (NMF);

GENES;

EID: 14044254190     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (5)

1. R. J. Cho, M. J. Campbell, et al, "A genome - wide transcriptional analysis of the mitotic cell cycle", Mol. Cell, 2, 1998, pp. 65-73
2. P. T. Spellman, G. Sherlock, et al, "Comprehensive identification of cell cycle - regulated gene of the yeast saccharomyces cerevisiae by microarray hybridation". Mol. Biol. Cell, 9, 1998, pp. 3273-3297
3. S. Raychaudhuri, J. M. Stuart, et al, "Principal components analysis to summarize microarray experiments: application to sporulation time series", Pac Symp Biocomput 4, 2000, pp. 55-466
4. O, Alter, P. O. Brown and D. Botstein, "Singular valu decomposition for genome - wide expression data processing and modeling", PNAS, 97, 2000, pp. 10101-10106
5. Y. Yamanishi, M. Itoh and M. Kanehisa, "Extraction of Organism Groups from Phylogenetic Profiles Using Independent Component Analysis", Genome Informatics 13, 2002, pp. 61-70