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Volumn 40, Issue 3-4 SPEC. ISS., 2005, Pages 153-158

Optimization of on-chip elongation for fabricating double-stranded DNA microarrays

Author keywords

DNA protein interactions; dsDNA microarrays; On chip elongation; Taq DNA polymerase

Indexed keywords

BIOMEDICAL ENGINEERING; CONCENTRATION (PROCESS); FABRICATION; MAGNESIUM PRINTING PLATES; OPTIMIZATION; PROTEINS; THERMAL EFFECTS;

EID: 13644261404     PISSN: 09277765     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.colsurfb.2004.10.019     Document Type: Conference Paper
Times cited : (7)

References (23)
  • 1
    • 0026682657 scopus 로고
    • Transcription factors: Structural families and principles of DNA recognition
    • C.O. Pabo, and R.T. Sauer Transcription factors: structural families and principles of DNA recognition Annu. Rev. Biochem. 61 1992 1053 1095
    • (1992) Annu. Rev. Biochem. , vol.61 , pp. 1053-1095
    • Pabo, C.O.1    Sauer, R.T.2
  • 2
    • 0024236673 scopus 로고
    • The mechanism of conservative site-specific recombination
    • N.L. Craig The mechanism of conservative site-specific recombination Annu. Rev. Genet. 22 1988 77 105
    • (1988) Annu. Rev. Genet. , vol.22 , pp. 77-105
    • Craig, N.L.1
  • 3
    • 0030911133 scopus 로고    scopus 로고
    • Recognition and cleavage of DNA by type-II restriction endonucleases
    • A. Pingoud, and A. Jeltsch Recognition and cleavage of DNA by type-II restriction endonucleases Eur. J. Biochem. 246 1997 1 22
    • (1997) Eur. J. Biochem. , vol.246 , pp. 1-22
    • Pingoud, A.1    Jeltsch, A.2
  • 4
    • 0030035666 scopus 로고    scopus 로고
    • Ordered and sequential binding of DNA protein to oriC, the chromosomal origin of Escherichia coli
    • C. Margulies, and J.M. Kaguni Ordered and sequential binding of DNA protein to oriC, the chromosomal origin of Escherichia coli J. Biol. Chem. 271 1996 17035 17040
    • (1996) J. Biol. Chem. , vol.271 , pp. 17035-17040
    • Margulies, C.1    Kaguni, J.M.2
  • 5
    • 0242332300 scopus 로고    scopus 로고
    • DNA-binding drugs: Getting stuck in
    • M. Brazil DNA-binding drugs: getting stuck in Nature 1 2002 9
    • (2002) Nature , vol.1 , pp. 9
    • Brazil, M.1
  • 7
    • 0023655949 scopus 로고
    • The binding of the cyclic AMP receptor protein to synthetic DNA sites containing permutations in the consensus sequence TGTGA
    • C. Jansen, A.M. Gronenborn, and G.M. Clore The binding of the cyclic AMP receptor protein to synthetic DNA sites containing permutations in the consensus sequence TGTGA Biochem. J. 246 1987 227 232
    • (1987) Biochem. J. , vol.246 , pp. 227-232
    • Jansen, C.1    Gronenborn, A.M.2    Clore, G.M.3
  • 9
    • 0018199224 scopus 로고
    • DNase footprinting: A simple method for the detection of protein-DNA binding specificity
    • D.J. Galas, and A. Schmitz DNase footprinting: a simple method for the detection of protein-DNA binding specificity Nucl. Acids Res. 5 1978 3157 3170
    • (1978) Nucl. Acids Res. , vol.5 , pp. 3157-3170
    • Galas, D.J.1    Schmitz, A.2
  • 13
    • 0033028741 scopus 로고    scopus 로고
    • Quantifying DNA-protein interactions by double-stranded DNA arrays
    • M.L. Bulyk, E. Gentalen, D.J. Lockhart, and G.M. Church Quantifying DNA-protein interactions by double-stranded DNA arrays Nat. Biotechnol. 17 1999 573 577
    • (1999) Nat. Biotechnol. , vol.17 , pp. 573-577
    • Bulyk, M.L.1    Gentalen, E.2    Lockhart, D.J.3    Church, G.M.4
  • 14
    • 0037471105 scopus 로고    scopus 로고
    • DNA microarrays with unimolecular hairpin double-stranded DNA probes: Fabrication and exploration of sequence-specific DNA/protein interactions
    • J.K. Wang, Y.F. Bai, T.X. Li, and Z.H. Lu DNA microarrays with unimolecular hairpin double-stranded DNA probes: fabrication and exploration of sequence-specific DNA/protein interactions J. Biochem. Biophys. Meth. 55 2003 215 232
    • (2003) J. Biochem. Biophys. Meth. , vol.55 , pp. 215-232
    • Wang, J.K.1    Bai, Y.F.2    Li, T.X.3    Lu, Z.H.4
  • 15
    • 3342928682 scopus 로고    scopus 로고
    • Fabricating unimolecular double-stranded DNA microarray on solid surface for probing DNA-protein interactions
    • J.K. Wang, T.X. Li, Y.F. Bai, Y. Zhu, and Z.H. Lu Fabricating unimolecular double-stranded DNA microarray on solid surface for probing DNA-protein interactions Molecules 8 2003 153 168
    • (2003) Molecules , vol.8 , pp. 153-168
    • Wang, J.K.1    Li, T.X.2    Bai, Y.F.3    Zhu, Y.4    Lu, Z.H.5
  • 16
    • 0037447832 scopus 로고    scopus 로고
    • Evaluating the binding affinities of NF-kB P50 homodimer to the wild-type and single-nucleotide mutant Ig-kB sites by the unimolecular dsDNA microarray
    • J.K. Wang, T.X. Li, Y.F. Bai, and Z.H. Lu Evaluating the binding affinities of NF-kB P50 homodimer to the wild-type and single-nucleotide mutant Ig-kB sites by the unimolecular dsDNA microarray Anal. Biochem. 316 2003 192 201
    • (2003) Anal. Biochem. , vol.316 , pp. 192-201
    • Wang, J.K.1    Li, T.X.2    Bai, Y.F.3    Lu, Z.H.4
  • 17
    • 0033569849 scopus 로고    scopus 로고
    • Massive parallel analysis of DNA-Hoechst 33258 binding specificity with a generic oligodeoxyribonucleotide microchip
    • A.L. Drobyshev, A.S. Zasedatelev, G.M. Yershov, and A.D. Mirzabekov Massive parallel analysis of DNA-Hoechst 33258 binding specificity with a generic oligodeoxyribonucleotide microchip Nucl. Acids Res. 27 1999 4100 4105
    • (1999) Nucl. Acids Res. , vol.27 , pp. 4100-4105
    • Drobyshev, A.L.1    Zasedatelev, A.S.2    Yershov, G.M.3    Mirzabekov, A.D.4
  • 18
    • 0035875344 scopus 로고    scopus 로고
    • Massive parallel analysis of the binding specificity of histone-like protein HU to single- and double-stranded DNA with generic oligodeoxyribonucleotide microchips
    • A.S. Krylov, O.A. Zasedateleva, D.V. Prokopenko, J. Rouviere-Yaniv, and A.D. Mirzabekov Massive parallel analysis of the binding specificity of histone-like protein HU to single- and double-stranded DNA with generic oligodeoxyribonucleotide microchips Nucl. Acids Res. 29 2001 2654 2660
    • (2001) Nucl. Acids Res. , vol.29 , pp. 2654-2660
    • Krylov, A.S.1    Zasedateleva, O.A.2    Prokopenko, D.V.3    Rouviere-Yaniv, J.4    Mirzabekov, A.D.5
  • 20
    • 84984934354 scopus 로고    scopus 로고
    • Molecular interactions on microarrays
    • E.M. Southern, K. Mir, and M. Shchepinov Molecular interactions on microarrays Nat. Genet. 21 Suppl. 1999 5 9
    • (1999) Nat. Genet. , vol.21 , Issue.SUPPL. , pp. 5-9
    • Southern, E.M.1    Mir, K.2    Shchepinov, M.3
  • 21
    • 0032984639 scopus 로고    scopus 로고
    • Double-stranded DNA arrays: Next steps in the surface campaign
    • R. Carlson, and R. Brent Double-stranded DNA arrays: next steps in the surface campaign Nat. Biotech. 17 1999 536 537
    • (1999) Nat. Biotech. , vol.17 , pp. 536-537
    • Carlson, R.1    Brent, R.2
  • 22
    • 0033572924 scopus 로고    scopus 로고
    • Inversion of in situ synthesized oligonucleotides: Improved reagents for hybridization and primer extension in DNA microarrays
    • M. Kwiatkowski, S. Fredriksson, A. Saksson, M. Nilsson, and U. Landegren Inversion of in situ synthesized oligonucleotides: improved reagents for hybridization and primer extension in DNA microarrays Nucl. Acids Res. 27 1999 4710 4714
    • (1999) Nucl. Acids Res. , vol.27 , pp. 4710-4714
    • Kwiatkowski, M.1    Fredriksson, S.2    Saksson, A.3    Nilsson, M.4    Landegren, U.5
  • 23
    • 0035945270 scopus 로고    scopus 로고
    • The effect of surface probe density on DNA hybridization
    • W.P. Alexander, J.H. Richard, and M.G. Rosina The effect of surface probe density on DNA hybridization Nucl. Acids Res. 29 2001 5163 5168
    • (2001) Nucl. Acids Res. , vol.29 , pp. 5163-5168
    • Alexander, W.P.1    Richard, J.H.2    Rosina, M.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.