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Volumn 68, Issue 12, 2004, Pages 2588-2597

A recQ gene homolog from the basidiomycetous mushroom Lentinula edodes: Sequence analysis and expression

Author keywords

Basidiomycetous mushroom; Functional complementation; Lentinula edodes; recQ gene; Transcriptional expression

Indexed keywords

AMINO ACIDS; CELLS; CLONING; FUNGI; PROTEINS;

EID: 13544254484     PISSN: 09168451     EISSN: None     Source Type: Journal    
DOI: 10.1271/bbb.68.2588     Document Type: Article
Times cited : (4)

References (46)
  • 1
    • 0021185614 scopus 로고
    • Isolation and genetic characterization of a thymineless death-resistant mutant of Escherichia coli K12: Identification of a new mutation (recQ1) that blocks the RecF recombination pathway
    • Nakayama, H., Nakayama, K., Nakayama, R., Irino, N., Nakayama, Y., and Hanawalt, P. C., Isolation and genetic characterization of a thymineless death-resistant mutant of Escherichia coli K12: identification of a new mutation (recQ1) that blocks the RecF recombination pathway. Mol. Gen. Genet., 195, 474-480 (1984).
    • (1984) Mol. Gen. Genet. , vol.195 , pp. 474-480
    • Nakayama, H.1    Nakayama, K.2    Nakayama, R.3    Irino, N.4    Nakayama, Y.5    Hanawalt, P.C.6
  • 2
    • 0022881457 scopus 로고
    • The recQ gene of Escherichia coli K12: Primary structure and evidence for SOS regulation
    • Irino, N., Nakayama, K., and Nakayama, H., The recQ gene of Escherichia coli K12: primary structure and evidence for SOS regulation. Mol. Gen. Genet., 205, 298-304 (1986).
    • (1986) Mol. Gen. Genet. , vol.205 , pp. 298-304
    • Irino, N.1    Nakayama, K.2    Nakayama, H.3
  • 3
    • 0028033989 scopus 로고
    • The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: A potential eukaryotic reverse gyrase
    • Gangloff, S., McDonald, J. P., Bendixen, C., Arthur, L., and Rothstein, R., The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase. Mol. Cell. Biol., 14, 8391-8398 (1994).
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 8391-8398
    • Gangloff, S.1    McDonald, J.P.2    Bendixen, C.3    Arthur, L.4    Rothstein, R.5
  • 4
    • 0030994386 scopus 로고    scopus 로고
    • +, a fission yeast gene related to the Bloom's and Werner's syndrome genes, is required for reversible S phage arrest
    • +, a fission yeast gene related to the Bloom's and Werner's syndrome genes, is required for reversible S phage arrest. EMBO J., 16, 2682-2692 (1997).
    • (1997) EMBO J. , vol.16 , pp. 2682-2692
    • Stewart, E.1    Chapman, C.R.2    Al-Khodairy, F.3    Carr, A.M.4    Enoch, T.5
  • 7
    • 0027942415 scopus 로고
    • Cloning and characterization of RECQL, a potential human homologue of the Escherichia coli DNA helicase RecQ
    • Puranam, K. L., and Blackshear, P. J., Cloning and characterization of RECQL, a potential human homologue of the Escherichia coli DNA helicase RecQ. J. Biol. Chem., 269, 29838-29845 (1994).
    • (1994) J. Biol. Chem. , vol.269 , pp. 29838-29845
    • Puranam, K.L.1    Blackshear, P.J.2
  • 8
    • 0032535661 scopus 로고    scopus 로고
    • Cloning of two new human helicase genes of the RecQ family: Biological significance of multiple species in higher eukaryotes
    • Kitao, S., Ohsugi, I., Ichikawa, K., Goto, M., Furuichi, Y., and Shimamoto, A., Cloning of two new human helicase genes of the RecQ family: biological significance of multiple species in higher eukaryotes. Genomics, 54, 443-452 (1998).
    • (1998) Genomics , vol.54 , pp. 443-452
    • Kitao, S.1    Ohsugi, I.2    Ichikawa, K.3    Goto, M.4    Furuichi, Y.5    Shimamoto, A.6
  • 9
    • 0034326274 scopus 로고    scopus 로고
    • Molecular characterisation of RecQ homologues in Arabidopsis thaliana
    • Hartung, F., Plchova, H., and Puchta, H., Molecular characterisation of RecQ homologues in Arabidopsis thaliana. Nucleic Acids Res., 28, 4275-4282 (2000).
    • (2000) Nucleic Acids Res. , vol.28 , pp. 4275-4282
    • Hartung, F.1    Plchova, H.2    Puchta, H.3
  • 10
    • 0033579344 scopus 로고    scopus 로고
    • Posttranscriptional gene silencing in Neurospora by a RecQ DNA helicase
    • Cogoni, C., and Macino, G., Posttranscriptional gene silencing in Neurospora by a RecQ DNA helicase. Science, 286, 2342-2345 (1999).
    • (1999) Science , vol.286 , pp. 2342-2345
    • Cogoni, C.1    Macino, G.2
  • 11
    • 0033796788 scopus 로고    scopus 로고
    • Identification of Drosophila melanogaster RECQE as a member of a new family of RecQ homologues that is preferentially expressed in early embryos
    • Jeong, S. M., Kawasaki, K., Juni, N., and Shibata, T., Identification of Drosophila melanogaster RECQE as a member of a new family of RecQ homologues that is preferentially expressed in early embryos. Mol. Gen. Genet., 263, 183-193 (2000).
    • (2000) Mol. Gen. Genet. , vol.263 , pp. 183-193
    • Jeong, S.M.1    Kawasaki, K.2    Juni, N.3    Shibata, T.4
  • 12
    • 0031848284 scopus 로고    scopus 로고
    • Replication focus-forming activity 1 and the Werner syndrome gene product
    • Yan, H., Chen, C., Kobayashi, R., and Newport, J., Replication focus-forming activity 1 and the Werner syndrome gene product. Nat. Genet., 19, 375-378 (1998).
    • (1998) Nat. Genet. , vol.19 , pp. 375-378
    • Yan, H.1    Chen, C.2    Kobayashi, R.3    Newport, J.4
  • 13
    • 0037010185 scopus 로고    scopus 로고
    • RecQ helicases: At the heart of genetic stability
    • Cobb, A. J., Bjergbaek, L., and Gasser, S. M., RecQ helicases: at the heart of genetic stability. FEBS Lett., 529, 43-48 (2002).
    • (2002) FEBS Lett. , vol.529 , pp. 43-48
    • Cobb, A.J.1    Bjergbaek, L.2    Gasser, S.M.3
  • 14
    • 0037202592 scopus 로고    scopus 로고
    • RecQ helicases and cellular responses to DNA damage
    • Wu, L., and Hickson, I. D., RecQ helicases and cellular responses to DNA damage. Mutat. Res., 509, 35-47 (2002).
    • (2002) Mutat. Res. , vol.509 , pp. 35-47
    • Wu, L.1    Hickson, I.D.2
  • 15
    • 0000517223 scopus 로고    scopus 로고
    • Intracellular levels of cyclic AMP and adenylate cyclase activity during mycelial development in fruit body formation in L. edodes
    • Takagi, Y., Katayose, Y., and Shishido, K., Intracellular levels of cyclic AMP and adenylate cyclase activity during mycelial development in fruit body formation in L. edodes. FEMS Microbiol. Lett., 55, 275-278 (1998).
    • (1998) FEMS Microbiol. Lett. , vol.55 , pp. 275-278
    • Takagi, Y.1    Katayose, Y.2    Shishido, K.3
  • 16
    • 0031971801 scopus 로고    scopus 로고
    • Organization of chromosome ends in Ustilago maydis. RecQ-like helicase motifs at telomeric regions
    • Sanchez-Alonso, P., and Guzman, P., Organization of chromosome ends in Ustilago maydis. RecQ-like helicase motifs at telomeric regions. Genetics, 148, 1043-1054 (1998).
    • (1998) Genetics , vol.148 , pp. 1043-1054
    • Sanchez-Alonso, P.1    Guzman, P.2
  • 17
    • 0026017915 scopus 로고
    • Cloning, sequence analysis and transcriptional expression of a ras gene of the edible basidiomycete Lentinus edodes
    • Hori, K., Kajiwara, S., Saito, T., Miyazawa, H., Katayose, Y., and Shishido, K., Cloning, sequence analysis and transcriptional expression of a ras gene of the edible basidiomycete Lentinus edodes. Gene, 105, 91-96 (1991).
    • (1991) Gene , vol.105 , pp. 91-96
    • Hori, K.1    Kajiwara, S.2    Saito, T.3    Miyazawa, H.4    Katayose, Y.5    Shishido, K.6
  • 18
    • 0026647217 scopus 로고
    • Isolation and sequence of a developmentally regulated putative novel gene, priA, from the basidiomycete Lentinus edodes
    • Kajiwara, S., Yamaoka, K., Hori, K., Miyazawa, H., Saito, T., Kanno, T., and Shishido, K., Isolation and sequence of a developmentally regulated putative novel gene, priA, from the basidiomycete Lentinus edodes. Gene, 114, 173-178 (1992).
    • (1992) Gene , vol.114 , pp. 173-178
    • Kajiwara, S.1    Yamaoka, K.2    Hori, K.3    Miyazawa, H.4    Saito, T.5    Kanno, T.6    Shishido, K.7
  • 19
    • 0028297381 scopus 로고
    • A novel cDNA, priBc, encoding a protein with a Zn(II)2-Cys6 zinc cluster DNA-binding motif, derived from the basidiomycetre Lentinus edodes
    • Endo, H., Kajiwara, S., Tsunoka, O., and Shishido, K., A novel cDNA, priBc, encoding a protein with a Zn(II)2-Cys6 zinc cluster DNA-binding motif, derived from the basidiomycetre Lentinus edodes. Gene, 139, 117-121 (1994).
    • (1994) Gene , vol.139 , pp. 117-121
    • Endo, H.1    Kajiwara, S.2    Tsunoka, O.3    Shishido, K.4
  • 20
    • 0028847855 scopus 로고
    • A fruiting body-specific cDNA, mfbAc, from the mushroom Lentinus edodes encodes a high-molecular-weight cell-adhesion protein containing an Arg-Gly-Asp motif
    • Kondoh, O., Muto, A., Kajiwara, S., Takagi, J., Saito, Y., and Shishido, K., A fruiting body-specific cDNA, mfbAc, from the mushroom Lentinus edodes encodes a high-molecular-weight cell-adhesion protein containing an Arg-Gly-Asp motif. Gene, 154, 31-37 (1995).
    • (1995) Gene , vol.154 , pp. 31-37
    • Kondoh, O.1    Muto, A.2    Kajiwara, S.3    Takagi, J.4    Saito, Y.5    Shishido, K.6
  • 21
    • 0032510725 scopus 로고    scopus 로고
    • Cloning, sequence analysis and expression of the basidiomycete Lentinus edodes gene uck1, encoding UMP-CMP kinase, the homolog of Saccharomyces cerevisiae URA6 gene
    • Kaneko, S., Miyazaki, Y., Yasuda, T., and Shishido, K., Cloning, sequence analysis and expression of the basidiomycete Lentinus edodes gene uck1, encoding UMP-CMP kinase, the homolog of Saccharomyces cerevisiae URA6 gene. Gene, 211, 259-266 (1998).
    • (1998) Gene , vol.211 , pp. 259-266
    • Kaneko, S.1    Miyazaki, Y.2    Yasuda, T.3    Shishido, K.4
  • 22
    • 0031968071 scopus 로고    scopus 로고
    • Identification of a CAP (adenylyl-cyclase-associated protein) homologous gene in Lentinus edodes and its functional complementation of yeast CAP mutants
    • Zhou, G. L., Miyazaki, Y., Nakagawa, T., Tanaka, K., Shishido, K., Matsuda, H., and Kawamukai, M., Identification of a CAP (adenylyl-cyclase- associated protein) homologous gene in Lentinus edodes and its functional complementation of yeast CAP mutants. Microbiology, 144, 1085-1093 (1998).
    • (1998) Microbiology , vol.144 , pp. 1085-1093
    • Zhou, G.L.1    Miyazaki, Y.2    Nakagawa, T.3    Tanaka, K.4    Shishido, K.5    Matsuda, H.6    Kawamukai, M.7
  • 23
    • 0035834923 scopus 로고    scopus 로고
    • Cloning and sequence analysis of the basidiomycete Lentinus edodes ribonucleotide reductase small subunit cDNA and expression of a corresponding gene in L. edodes
    • Kaneko, S., and Shishido, K., Cloning and sequence analysis of the basidiomycete Lentinus edodes ribonucleotide reductase small subunit cDNA and expression of a corresponding gene in L. edodes. Gene, 262, 43-50 (2001).
    • (2001) Gene , vol.262 , pp. 43-50
    • Kaneko, S.1    Shishido, K.2
  • 24
    • 1842859007 scopus 로고    scopus 로고
    • Cloning and expression of cytochrome P450 genes, belonging to a new P450 family, of the basidiomycete Lentinula edodes
    • Akiyama, R., Sato, Y., Kajiwara, S., and Shishido, K., Cloning and expression of cytochrome P450 genes, belonging to a new P450 family, of the basidiomycete Lentinula edodes. Biosci. Biotechnol. Biochem., 66, 2183-2188 (2002).
    • (2002) Biosci. Biotechnol. Biochem. , vol.66 , pp. 2183-2188
    • Akiyama, R.1    Sato, Y.2    Kajiwara, S.3    Shishido, K.4
  • 25
    • 0012012868 scopus 로고    scopus 로고
    • Distribution of hydrophobin 1 gene transcript in developing fruiting bodies of Lentinula edodes
    • Nishizawa, H., Miyazaki, Y., Kaneko, S., and Shishido, K., Distribution of hydrophobin 1 gene transcript in developing fruiting bodies of Lentinula edodes. Biosci. Biotechnol. Biochem., 66, 1951-1954 (2002).
    • (2002) Biosci. Biotechnol. Biochem. , vol.66 , pp. 1951-1954
    • Nishizawa, H.1    Miyazaki, Y.2    Kaneko, S.3    Shishido, K.4
  • 26
    • 0025308608 scopus 로고
    • The basidiomycete Lentinus edodes linear mitochondrial DNA plasmid contains a segment exhibiting a high autonomously replicating activity in Saccharomyces cerevisiae
    • Katayose, Y., Kajiwara, S., and Shishido, K., The basidiomycete Lentinus edodes linear mitochondrial DNA plasmid contains a segment exhibiting a high autonomously replicating activity in Saccharomyces cerevisiae. Nucleic Acids Res., 18, 1395-1400 (1990).
    • (1990) Nucleic Acids Res. , vol.18 , pp. 1395-1400
    • Katayose, Y.1    Kajiwara, S.2    Shishido, K.3
  • 27
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan, D., Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol., 166, 557-580 (1983).
    • (1983) J. Mol. Biol. , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 29
    • 0001305277 scopus 로고
    • Amplification of flanking sequences by inverse PCR
    • eds. Innis, M. A., Gelfand, D. H., Sninsky, J. J., and White, T. J., Academic Press Inc., London
    • Ochman, H., Medhora, M. M., Garza, M. M., and Hartle, D. L., Amplification of flanking sequences by inverse PCR. In "PCR Protocols: A Guide to Methods and Application", eds. Innis, M. A., Gelfand, D. H., Sninsky, J. J., and White, T. J., Academic Press Inc., London, pp. 219-227 (1990).
    • (1990) PCR Protocols: A Guide to Methods and Application , pp. 219-227
    • Ochman, H.1    Medhora, M.M.2    Garza, M.M.3    Hartle, D.L.4
  • 30
    • 0002299696 scopus 로고
    • Inverse polymerase chain reaction
    • eds. McPherson, M. J., Quirke, P., and Taylor, G. R., Oxford University Press, New York
    • Silver, J., Inverse polymerase chain reaction. In "PCR: A Practical Approach", eds. McPherson, M. J., Quirke, P., and Taylor, G. R., Oxford University Press, New York, pp. 137-146 (1991).
    • (1991) PCR: A Practical Approach , pp. 137-146
    • Silver, J.1
  • 31
    • 0023132250 scopus 로고
    • Isolation of full-length putative rat lysophospholipase cDNA using improved methods for mRNA isolation and cDNA cloning
    • Han, J. H., Stratowa, C., and Rutter, W. J., Isolation of full-length putative rat lysophospholipase cDNA using improved methods for mRNA isolation and cDNA cloning. Biochemistry, 26, 1617-1625 (1987).
    • (1987) Biochemistry , vol.26 , pp. 1617-1625
    • Han, J.H.1    Stratowa, C.2    Rutter, W.J.3
  • 32
    • 0033801839 scopus 로고    scopus 로고
    • Structure and function of a pyrimidine/purine-biased sequence from the 5′-flanking region of the basidiomycete Lentinus edodes gene priA
    • Yamazaki, T., Hasebe, T., Kajiwara, S., and Shishido, K., Structure and function of a pyrimidine/purine-biased sequence from the 5′-flanking region of the basidiomycete Lentinus edodes gene priA. Mol. Gen. Genet., 263, 262-270 (2000).
    • (2000) Mol. Gen. Genet. , vol.263 , pp. 262-270
    • Yamazaki, T.1    Hasebe, T.2    Kajiwara, S.3    Shishido, K.4
  • 33
    • 0033256777 scopus 로고    scopus 로고
    • Analysis of mfbA alleles of the eubasidiomycete Lentinus edodes
    • Yasuda, T., and Shishido, K., Analysis of mfbA alleles of the eubasidiomycete Lentinus edodes. Biosci. Biotechnol. Biochem., 63, 2228-2231 (1999).
    • (1999) Biosci. Biotechnol. Biochem. , vol.63 , pp. 2228-2231
    • Yasuda, T.1    Shishido, K.2
  • 34
    • 0017643426 scopus 로고
    • RNA molecular weight determinations by gel electrophoresis under denaturing conditions, a critical reexamination
    • Lehrach, H., Diamond, D., Wozney, J. M., and Boedtker, H., RNA molecular weight determinations by gel electrophoresis under denaturing conditions, a critical reexamination. Biochemistry, 16, 4743-4751 (1977).
    • (1977) Biochemistry , vol.16 , pp. 4743-4751
    • Lehrach, H.1    Diamond, D.2    Wozney, J.M.3    Boedtker, H.4
  • 35
    • 0022432484 scopus 로고
    • Rapid transfer of DNA from agarose gels to nylon membranes
    • Reed, K. C., and Mann, D. A., Rapid transfer of DNA from agarose gels to nylon membranes. Nucleic Acids Res., 13, 7207-7221 (1985).
    • (1985) Nucleic Acids Res. , vol.13 , pp. 7207-7221
    • Reed, K.C.1    Mann, D.A.2
  • 37
    • 0034947583 scopus 로고    scopus 로고
    • RecQ helicases and topoisomerases: Components of a conserved complex for the regulation of genetic recombination
    • Wu, L., and Hickson, I. D., RecQ helicases and topoisomerases: components of a conserved complex for the regulation of genetic recombination. Cell. Mol. Life Sci., 58, 894-901 (2001).
    • (2001) Cell. Mol. Life Sci. , vol.58 , pp. 894-901
    • Wu, L.1    Hickson, I.D.2
  • 38
    • 0037055915 scopus 로고    scopus 로고
    • RecQ helicases and genome stability: Lessons from model organisms and human disease
    • Bjergbaek, L., Cobb, J. A., and Grasser, S. M., RecQ helicases and genome stability: lessons from model organisms and human disease. Swiss. Med. Wkly, 132, 433-442 (2002).
    • (2002) Swiss. Med. Wkly , vol.132 , pp. 433-442
    • Bjergbaek, L.1    Cobb, J.A.2    Grasser, S.M.3
  • 40
    • 0032570031 scopus 로고    scopus 로고
    • Cloning of two isoforms of mouse DNA helicase Q1/RecQL cDNA; alpha form is expressed ubiquitously and beta form specifically in the testis
    • Wang, W. S., Seki, M., Yamaoka, T., Seki, T., Tada, S., Katada, T., Fujimoto, H., and Enomoto, T., Cloning of two isoforms of mouse DNA helicase Q1/RecQL cDNA; alpha form is expressed ubiquitously and beta form specifically in the testis. Biochim. Biophys. Acta, 1443, 198-202 (1998).
    • (1998) Biochim. Biophys. Acta , vol.1443 , pp. 198-202
    • Wang, W.S.1    Seki, M.2    Yamaoka, T.3    Seki, T.4    Tada, S.5    Katada, T.6    Fujimoto, H.7    Enomoto, T.8
  • 41
    • 0033046015 scopus 로고    scopus 로고
    • Evolution of the RECQ family of helicases: A Drosophila homolog, Dmblm, is similar to the human Bloom syndrome gene
    • Kusano, K., Berres, M. E., and Engels, W. R., Evolution of the RECQ family of helicases: a Drosophila homolog, Dmblm, is similar to the human Bloom syndrome gene. Genetics, 151, 1027-1039 (1999).
    • (1999) Genetics , vol.151 , pp. 1027-1039
    • Kusano, K.1    Berres, M.E.2    Engels, W.R.3
  • 42
    • 0032509302 scopus 로고    scopus 로고
    • The C. elegans Sequencing Consortium, Genome sequence of the nematode C. elegans: A platform for investigating biology
    • The C. elegans Sequencing Consortium, Genome sequence of the nematode C. elegans: a platform for investigating biology. Science, 282, 2012-2018 (1998).
    • (1998) Science , vol.282 , pp. 2012-2018
  • 43
    • 0037279866 scopus 로고    scopus 로고
    • The QDE-3 homologue RecQ-2 co-operates with QDE-3 in DNA repair in Neurospora crassa
    • Pickford, A., Braccini, L., Macino, G., and Cogoni, C., The QDE-3 homologue RecQ-2 co-operates with QDE-3 in DNA repair in Neurospora crassa. Curr. Genet., 42, 220-227 (2003).
    • (2003) Curr. Genet. , vol.42 , pp. 220-227
    • Pickford, A.1    Braccini, L.2    Macino, G.3    Cogoni, C.4
  • 44
    • 0026556457 scopus 로고
    • Characterization of the promoter region of the basidiomycete Lentinus edodes Le.ras gene
    • Kajiwara, S., and Shishido, K., Characterization of the promoter region of the basidiomycete Lentinus edodes Le.ras gene. FEMS Microbiol. Lett., 92, 146-150 (1992).
    • (1992) FEMS Microbiol. Lett. , vol.92 , pp. 146-150
    • Kajiwara, S.1    Shishido, K.2
  • 45
    • 0034089029 scopus 로고    scopus 로고
    • Bipartite structure of the SGS1 DNA helicase in Saccharomyces cerevisiae
    • Mullen, J. R., Kaliraman, V., and Brill, S. J., Bipartite structure of the SGS1 DNA helicase in Saccharomyces cerevisiae. Genetics, 154, 1101-1114 (2000).
    • (2000) Genetics , vol.154 , pp. 1101-1114
    • Mullen, J.R.1    Kaliraman, V.2    Brill, S.J.3
  • 46
    • 0034882238 scopus 로고    scopus 로고
    • The N-terminal region of Sgs1, which interacts with Top3, is required for complementation of MMS sensitivity and suppression of hyper-recombination in sgs1 disruptants
    • Ui, A., Satoh, Y., Onoda, F., Miyajima, A., Seki, M., and Enomoto, T., The N-terminal region of Sgs1, which interacts with Top3, is required for complementation of MMS sensitivity and suppression of hyper-recombination in sgs1 disruptants. Mol. Genet. Gen., 256, 837-850 (2001).
    • (2001) Mol. Genet. Gen. , vol.256 , pp. 837-850
    • Ui, A.1    Satoh, Y.2    Onoda, F.3    Miyajima, A.4    Seki, M.5    Enomoto, T.6


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