A historical biogeographical protocol for studying biotic diversification by taxon pulses

Journal of Biogeography

Volumn 32, Issue 2, 2005, Pages 249-260

  Halas, Dominik ^a,b   Zamparo, David ^a   Brooks, Daniel R ^a,c  

^a UNIVERSITY OF TORONTO   (Canada)

^b DEPARTMENT OF NATURAL HISTORY   (Canada)

^c University of Toronto ^*  (Costa Rica)

Author keywords

BPA; Extinction; Historical biogeography; Mesoamerica; Mexico; Peripheral isolates speciation; Phylogenetic inference; Sympatric speciation; Taxon pulse radiations; Vicariance

Indexed keywords

BIOGEOGRAPHY; EXTINCTION; PARSIMONY ANALYSIS; PHYLOGENETICS; SPECIATION (BIOLOGY); VICARIANCE;

CENTRAL AMERICA; MEXICO [NORTH AMERICA]; NORTH AMERICA; WESTERN HEMISPHERE; WORLD;

EID: 13444279173     PISSN: 03050270     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-2699.2004.01147.x     Document Type: Article

References (40)

1. Bouchard, P., Brooks, D.R. & Yeates, D.K. (in press) Mosaic macroevolution in Australian wet tropics arthropods: community assemblage by taxon pulses. Rainforest: past, present, future (ed. by C. Moritz and E. Bermingham). University of Chicago Press, Chicago, IL.
2. Brooks, D.R. (1990) Parsimony analysis in historical biogeography and coevolution: methodological and theoretical update. Systematic Zoology, 39, 14-30.
3. Brooks, D.R. & McLennan, D.A. (2001) A comparison of a discovery-based and an event-based method of historical biogeography. Journal of Biogeography, 28, 757-767.
4. Brooks, D.R. & McLennan, D.A. (2002) The nature of diversity - an evolutionary voyage of discovery. University of Chicago Press, Chicago, IL.
5. Brooks, D.R., Van Veller, M.G.P. & McLennan, D.A. (2001) How to do BPA, really. Journal of Biogeography, 28, 345-358.
6. Darlington, P.J. (1943) Carabidae of mountains and islands: data on the evolution of isolated faunas, and on atrophy of wings. Ecological Monographs, 13, 37-61.
7. Donoghue, M.J. & Moore, B.R. (2003) Toward an integrative historical biogeography. Integrative and Comparative Biology, 43, 261-270.
8. Erwin, T.L. (1979) Thoughts on the evolutionary history of ground beetles: hypotheses generated from comparative faunal analyses of lowland forest sites in temperate and tropical regions. Carabid beetles - their evolution, natural history, ana classification (ed. by T.L. Erwin, G.E. Ball and D.R. Whitehead), pp. 539-592. W. Junk, The Hague.
9. Erwin, T.L. (1981) Taxon pulses, vicariance, and dispersal: an evolutionary synthesis illustrated by carabid beetles. Vicariance biogeography - a critique (ed. by G. Nelson and D.E. Rosen), pp. 159-196. Columbia University Press, New York.
10. Erwin, T.L. (1985) The taxon pulse: a general pattern of lineage radiation and extinction among carabid beetles. Taxonomy, phylogeny, and zoogeography of beetles and ants (ed. by G.E. Ball), pp. 437-472. W. Junk, Dordrecht.
11. Erwin, T.L. (1991) An evolutionary basis for conservation strategies. Science, 253, 750-752.
12. Erwin, T.L. & Adis, J. (1982) Amazonian inundation forests: their role as short-term refuges and generators of species richness and taxon pulses. Biological diversification in the tropics (ed. by G. Prance), pp. 358-371. Columbia University Press, New York.
13. Green, M., van Veller, M. & Brooks, D.R. (2002) Assessing modes of speciation: range asymmetry and biogeographical congruence. Cladistics, 18, 112-124.
14. Heaney, L.R. (2000) Dynamic disequilibrium: a long-term, large-scale perspective on the equilibrium model of island biogeography. Global Ecology and Biogeography, 9, 59-74.
15. Heenan, P.B. & Mitchell, A.D. (2003) Phylogeny, biogeography and adaptive radiation of Pachycladon (Brassicaceae) in the mountains of South Island, New Zealand. Journal of Biogeography, 30, 1737-1749.
16. Humphries, C.J. & Parenti, L. (1999) Cladistic biogeography, 2nd edn. Academic Press, London.
17. Lieberman, B.S. (2000) Paleobiogeography. Plenum/Kluwer Academic, New York.
18. Lieberman, B.S. (2001) Applying molecular phylogeography to test paleoecological hypotheses: a case study involving Amblema plicata (Mollusca: Unionidae). Evolutionary paleoecology (ed. by W.D. Allmon & D.J. Bottjer), pp. 83-103. Columbia University Press, New York.
19. Lieberman, B.S. (2002) Phylogenetic biogeography with and without the fossil record: gauging the effects of extinction and paleontological incompleteness. Palaeogeography Palaeoclimatology and Palaeoecology, 178, 39-52.
20. Lieberman, B.S. (2003a) Unifying theory and methodology in biogeography. Evolutionary Biology, 33, 1-25.
21. Lieberman, B.S. (2003b) Paleobiogeography - the relevance of fossils to biogeography. Annual Review of Ecology, Evolution, and Systematics, 34, 51-69.
22. Liebherr, J.K. & Hajek, A.E. (1990) A cladistic test of the taxon cycle and taxon pulse hypothesis. Cladistics, 6, 39-59.
23. Losos, J.B. & Schluter, D. (2000) Analysis of an evolutionary species-area relationship. Nature, 408, 847-850.
24. MacArthur, R.H. & Wilson, E.O. (1963) An equilibrium theory of insular zoogeography. Evolution, 17, 373-387.
25. MacArthur, R.H. & Wilson, E.O. (1967) The theory of island biogeography. Princeton University Press, Princeton, NJ.
26. Marshall, C.J. & Liebherr, J.K. (2000) Cladistic biogeography of the Mexican transition zone. Journal of Biogeography, 27, 203-216.
27. McLennan, D.A. & Brooks, D.R. (2002) Complex histories of speciation and dispersal: an example using some Australian birds. Journal of Biogeography, 29, 1055-1066.
28. Nelson, G. (1974) Historical biogeography: an alternative formalization. Systematic Zoology, 23, 555-558.
29. Nelson, G. & Platnick, N.I. (1981) Systematics and biogeography: cladistics and vicariance. Columbia University Press, New York.
30. Nelson, G. & Rosen, D.E. (eds) (1980) Vicariance biogeography - a critique. Columbia University Press, New York.
31. Platnick, N.I. & Nelson, G. (1978) A method of analysis for historical biogeography. Systematic Zoology, 27, 1-16.
32. Preston, F.W. (1962) The canonical distribution of commonness and rarity: Part I. Ecology, 43, 185-215.
33. Savage, J.M. (1982) The enigma of the Central American herpetofauna: dispersals or vicariance? Annals of the Missouri Botanical Garden, 69, 464-547.
34. Spironello, M. & Brooks, D.R. (2003) Dispersal and diversification in the evolution of Inseliellium, an archipelagic dipteran group. Journal of Biogeography, 30, 1563-1573.
35. Van Veller, M.G.P. & Brooks, D.R. (2001) When simplicity is not parsimonious: A priori and a posteriori methods in historical biogeography. Journal of Biogeography, 28, 1-11.
36. Whittaker, R.J. (2000) Scale, succession and complexity in island biogeography: are we asking the right questions? Global Ecology and Biogeography, 9, 75-85.
37. Wilson, E.O. (1959) Adaptive shift and dispersal in a tropical ant fauna. Evolution, 13, 122-144.
38. Wilson, E.O. (1961) The nature of the taxon cycle in the Melanesian ant fauna. American Naturalist, 95, 169-193.
39. Wojcicki, M. & Brooks, D.R. (2005) PACT: a simple and efficient algorithm for generating area cladograms. Journal of Biogeography, in press.
40. Zink, R.M., Blackwell-Rago, R.C. & Ronquist, F. (2000) The shifting roles of dispersal and vicariance in biogeography. Proceedings of the Royal Society, London B, 267, 497-503.