-
1
-
-
0024885851
-
Algorithm 676 - ODRPACK: Software for weighted orthogonal distance regression
-
Boggs, P.T., Byrd, R.H., Donaldson, J.R., and Schnabel, R.B. 1989. Algorithm 676 - ODRPACK: Software for weighted orthogonal distance regression. ACM Trans. Math. Software 15(4), 348-364.
-
(1989)
ACM Trans. Math. Software
, vol.15
, Issue.4
, pp. 348-364
-
-
Boggs, P.T.1
Byrd, R.H.2
Donaldson, J.R.3
Schnabel, R.B.4
-
2
-
-
0004295650
-
-
Center for Computing and Applied Mathematics, U.S. Department of Commerce, Gaithersburg, MD
-
Boggs, P.T., Byrd, R.H., Rogers, J.E., and Schnabel, R.B. 1992. User's Reference Guide for ODRPACK Version 2.01: Software for Weighted Orthogonal Distance Regression, Center for Computing and Applied Mathematics, U.S. Department of Commerce, Gaithersburg, MD.
-
(1992)
User's Reference Guide for ODRPACK Version 2.01: Software for Weighted Orthogonal Distance Regression
-
-
Boggs, P.T.1
Byrd, R.H.2
Rogers, J.E.3
Schnabel, R.B.4
-
3
-
-
0001470835
-
A stable and efficient algorithm for nonlinear orthogonal distance regression
-
Boggs, P.T., Byrd, R.H., and Schnabel, R.B. 1987. A stable and efficient algorithm for nonlinear orthogonal distance regression. SIAM J. Sci. Stat. Comput. 8(6), 1052-1078.
-
(1987)
SIAM J. Sci. Stat. Comput.
, vol.8
, Issue.6
, pp. 1052-1078
-
-
Boggs, P.T.1
Byrd, R.H.2
Schnabel, R.B.3
-
4
-
-
0003804002
-
-
Chapman and Hall/CRC, New York, NY
-
Carroll, R.J., Ruppert, D., and Stefanski, L.A. 1995. Measurement Error in Nonlinear Models, Chapman and Hall/CRC, New York, NY.
-
(1995)
Measurement Error in Nonlinear Models
-
-
Carroll, R.J.1
Ruppert, D.2
Stefanski, L.A.3
-
5
-
-
0033985570
-
Kinetic analysis of a molecular model of the budding yeast cell cycle
-
Chen, K., Csikasz-Nagy, A., Gyorffy, B., Val, J., Novak, B., and Tyson, J.J. 2000. Kinetic analysis of a molecular model of the budding yeast cell cycle. Mol. Biol. Cell 11, 369-391.
-
(2000)
Mol. Biol. Cell
, vol.11
, pp. 369-391
-
-
Chen, K.1
Csikasz-Nagy, A.2
Gyorffy, B.3
Val, J.4
Novak, B.5
Tyson, J.J.6
-
6
-
-
0038975426
-
Finding a zero by means of successive linear interpolation
-
B. Dejon and P. Henrici, eds., Wiley-Interscience, London
-
Dekker, T.J. 1969. Finding a zero by means of successive linear interpolation, in B. Dejon and P. Henrici, eds., Constructive Aspects of the Fundamental Theorem of Algebra, Wiley-Interscience, London.
-
(1969)
Constructive Aspects of the Fundamental Theorem of Algebra
-
-
Dekker, T.J.1
-
9
-
-
0002445594
-
LSODE and LSODI, two new initial value ordinary differential equation solvers
-
Hindmarsh, A.C. 1980. LSODE and LSODI, two new initial value ordinary differential equation solvers. ACM SIGNUM Newsletter 15(4), 10-11.
-
(1980)
ACM SIGNUM Newsletter
, vol.15
, Issue.4
, pp. 10-11
-
-
Hindmarsh, A.C.1
-
10
-
-
0001811061
-
ODEPACK: A systematized collection of ODE solvers
-
R.S. Stepleman et al., eds., North Holland, New York
-
Hindmarsh, A.C. 1983. ODEPACK: A systematized collection of ODE solvers, in R.S. Stepleman et al., eds., Scientific Computing, 55-64. North Holland, New York.
-
(1983)
Scientific Computing
, pp. 55-64
-
-
Hindmarsh, A.C.1
-
11
-
-
0035846723
-
Pull-scale model of glycolysis in Saccharomyces cerevisiae
-
Hynne, P., Dano, S., and Sorensen, P.G. 2001. Pull-scale model of glycolysis in Saccharomyces cerevisiae. Biophys. Chem. 94, 121-163.
-
(2001)
Biophys. Chem.
, vol.94
, pp. 121-163
-
-
Hynne, P.1
Dano, S.2
Sorensen, P.G.3
-
12
-
-
0004288821
-
-
Prentice Hall, Englewood Cliffs, NJ
-
Kahaner, D., Moler, C., and Nash, S. 1989. Numerical Methods and Software, Prentice Hall, Englewood Cliffs, NJ.
-
(1989)
Numerical Methods and Software
-
-
Kahaner, D.1
Moler, C.2
Nash, S.3
-
13
-
-
0026719599
-
Regulation of the cdc25 protein during the cell cycle in Xenopus extracts
-
Kumagai, A., and Dunphy, W.G. 1992. Regulation of the cdc25 protein during the cell cycle in Xenopus extracts. Cell 70, 139-151.
-
(1992)
Cell
, vol.70
, pp. 139-151
-
-
Kumagai, A.1
Dunphy, W.G.2
-
14
-
-
0029016412
-
Control of the Cdc2/Cyclin B complex in Xenopus egg extracts arrested at a G2/M checkpoint with DNA synthesis inhibitors
-
Kumagai, A., and Dunphy, W.G. 1995. Control of the Cdc2/Cyclin B complex in Xenopus egg extracts arrested at a G2/M checkpoint with DNA synthesis inhibitors. Mol. Biol. Cell 6, 199-213.
-
(1995)
Mol. Biol. Cell
, vol.6
, pp. 199-213
-
-
Kumagai, A.1
Dunphy, W.G.2
-
15
-
-
0032485809
-
Modeling M-phase control in Xenopus oocyte extracts: The surveillance mechanism for unreplicated DNA
-
Marlovits, G., Tyson, C.J., Novak, B., and Tyson, J.J. 1998. Modeling M-phase control in Xenopus oocyte extracts: The surveillance mechanism for unreplicated DNA. Biophys. Chem. 72, 169-184.
-
(1998)
Biophys. Chem.
, vol.72
, pp. 169-184
-
-
Marlovits, G.1
Tyson, C.J.2
Novak, B.3
Tyson, J.J.4
-
16
-
-
0242574982
-
Parameter estimation in biochemical pathways: A comparison of global optimization methods
-
in press
-
Moles, C.G., Mendes, P., and Banga, J.R. 2003. Parameter estimation in biochemical pathways: A comparison of global optimization methods. Genome Res. 13, in press.
-
(2003)
Genome Res. 13
-
-
Moles, C.G.1
Mendes, P.2
Banga, J.R.3
-
17
-
-
13444255043
-
-
Private communication, Aug.
-
Moore, J. 1997. Private communication, Aug.
-
(1997)
-
-
Moore, J.1
-
18
-
-
0003714659
-
-
SIAM, Philadelphia, PA
-
Moré, J.J., and Wright, S.J. 1993. Optimization Software Guide, SIAM, Philadelphia, PA.
-
(1993)
Optimization Software Guide
-
-
Moré, J.J.1
Wright, S.J.2
-
19
-
-
0004099712
-
-
W.H. Freeman, New York, NY
-
Murray, A., and Hunt, T. 1993. The Cell Cycle, W.H. Freeman, New York, NY.
-
(1993)
The Cell Cycle
-
-
Murray, A.1
Hunt, T.2
-
20
-
-
0027716813
-
Numerical analysis of a comprehensive model of M-phase control in Xenopus oocyte extracts and intact embryos
-
Novak, B., and Tyson, J. 1993. Numerical analysis of a comprehensive model of M-phase control in Xenopus oocyte extracts and intact embryos. J. Cell Sci. 106, 1153-1168.
-
(1993)
J. Cell Sci.
, vol.106
, pp. 1153-1168
-
-
Novak, B.1
Tyson, J.2
-
21
-
-
0000536084
-
Automatic selection of methods for solving stiff and nonstiff systems of ordinary differential equations
-
Petzold, L. 1983. Automatic selection of methods for solving stiff and nonstiff systems of ordinary differential equations. SIAM J. Sci. Stat. Comput. 4, 136-148.
-
(1983)
SIAM J. Sci. Stat. Comput.
, vol.4
, pp. 136-148
-
-
Petzold, L.1
-
22
-
-
0345700833
-
Building a cell cycle oscillator: Hysteresis and bistability in the activation of Cdc2
-
Pomerening, J.R., Sontag, E.D., and Ferrell, J.E. 2003. Building a cell cycle oscillator: Hysteresis and bistability in the activation of Cdc2. Nature Cell Biol. 5, 346-351.
-
(2003)
Nature Cell Biol.
, vol.5
, pp. 346-351
-
-
Pomerening, J.R.1
Sontag, E.D.2
Ferrell, J.E.3
-
23
-
-
0003588772
-
-
NASA Reference Publication 1327, Lawrence Livermore National Laboratory, Livermore, CA
-
Radhakrishnan, K., and Hindmarsh, A.C. 1993. Description and Use of LSODE, the Livermore Solver for Ordinary Differential Equations, NASA Reference Publication 1327, Lawrence Livermore National Laboratory, Livermore, CA.
-
(1993)
Description and Use of LSODE, the Livermore Solver for Ordinary Differential Equations
-
-
Radhakrishnan, K.1
Hindmarsh, A.C.2
-
24
-
-
0037417803
-
Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts
-
Sha, W., Moore, J., Chen, K., Lassaletta, A.D., Yi, C-S., Tyson, J.J., and Sible, J.C. 2003. Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts. Proc. Nat. Acad. Sci. USA 100, 975-980.
-
(2003)
Proc. Nat. Acad. Sci. USA
, vol.100
, pp. 975-980
-
-
Sha, W.1
Moore, J.2
Chen, K.3
Lassaletta, A.D.4
Yi, C.-S.5
Tyson, J.J.6
Sible, J.C.7
-
25
-
-
0004085311
-
-
W.B. Saunders, Philadelphia, PA
-
Shampine, L.F., and Allen, R.C. 1973. Numerical Computing: An Introduction, W.B. Saunders, Philadelphia, PA.
-
(1973)
Numerical Computing: An Introduction
-
-
Shampine, L.F.1
Allen, R.C.2
-
26
-
-
0003424261
-
-
W.H. Freeman, San Francisco, CA
-
Shampine, L.F., and Gordon, M.K. 1975. Computer Solution of Ordinary Differential Equations, The Initial Value Problem, W.H. Freeman, San Francisco, CA.
-
(1975)
Computer Solution of Ordinary Differential Equations, the Initial Value Problem
-
-
Shampine, L.F.1
Gordon, M.K.2
-
27
-
-
0025572247
-
Cyclin activation of P34cdc2
-
Solomon, M.J., Glotzer, M., Lee, T.H., Philippe, M., and Kirschner, M.W. 1990. Cyclin activation of P34cdc2. Cell 63, 1013-1024.
-
(1990)
Cell
, vol.63
, pp. 1013-1024
-
-
Solomon, M.J.1
Glotzer, M.2
Lee, T.H.3
Philippe, M.4
Kirschner, M.W.5
-
28
-
-
0027236688
-
Two distinct mechanisms for negative regulation of the Weel protein kinase
-
Tang, Z., Coleman, T.R., and Dunphy, W.G. 1993. Two distinct mechanisms for negative regulation of the Weel protein kinase. EMBO J. 12(9), 3427-3436.
-
(1993)
EMBO J.
, vol.12
, Issue.9
, pp. 3427-3436
-
-
Tang, Z.1
Coleman, T.R.2
Dunphy, W.G.3
-
29
-
-
0033857139
-
Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes?
-
Teusink, B., Passarge, J., Reijenga, C.A., Esgalhado, E., van der Weijden, C.C., Schepper, M., Walsh, M.C., Bakker, B.M., van Dam, K., Westerhoff, H.V., and Snoep, J.L. 2000. Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Eur. J. Biochem. 267, 5313-5329.
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 5313-5329
-
-
Teusink, B.1
Passarge, J.2
Reijenga, C.A.3
Esgalhado, E.4
Van Der Weijden, C.C.5
Schepper, M.6
Walsh, M.C.7
Bakker, B.M.8
Van Dam, K.9
Westerhoff, H.V.10
Snoep, J.L.11
-
30
-
-
0035656416
-
Network dynamics and cell physiology
-
Tyson, J.J., Chen, K., and Novak, B. 2001. Network dynamics and cell physiology. Nature Rev. Mol. Cell Biol. 2, 908-916.
-
(2001)
Nature Rev. Mol. Cell Biol.
, vol.2
, pp. 908-916
-
-
Tyson, J.J.1
Chen, K.2
Novak, B.3
-
31
-
-
0029418131
-
Checkpoints in the cell cycle from a modeler's perspective
-
Tyson, J.J., Novak, B., Chen, K., and Val, J. 1995. Checkpoints in the cell cycle from a modeler's perspective. Progress in Cell Cycle Research 1, 1-8.
-
(1995)
Progress in Cell Cycle Research
, vol.1
, pp. 1-8
-
-
Tyson, J.J.1
Novak, B.2
Chen, K.3
Val, J.4
-
32
-
-
0034644270
-
The segment polarity network is a robust developmental module
-
von Dassow, G., Meir, E., Munro, E.M., and O'Dell, G.M. 2000. The segment polarity network is a robust developmental module. Nature 406, 188-192.
-
(2000)
Nature
, vol.406
, pp. 188-192
-
-
Von Dassow, G.1
Meir, E.2
Munro, E.M.3
O'Dell, G.M.4
-
33
-
-
13444312770
-
-
Submitted for publication
-
Wei, S., Moore, J., Chen, K., Lassaletta, A.D., Yi, C.S., Tyson, J.J., and Sible, J.C. 2002. Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts. Submitted for publication.
-
(2002)
Hysteresis Drives Cell-cycle Transitions in Xenopus laevis Egg Extracts
-
-
Wei, S.1
Moore, J.2
Chen, K.3
Lassaletta, A.D.4
Yi, C.S.5
Tyson, J.J.6
Sible, J.C.7
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