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Volumn 20, Issue 3, 2004, Pages 428-429

SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experiments

Author keywords

[No Author keywords available]

Indexed keywords

OLIGONUCLEOTIDE;

EID: 1342288003     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btg434     Document Type: Article
Times cited : (10)

References (10)
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    • Bozdech,Z., Zhu,J., Joachimiak,M.P., Cohen,F.E., Pulliam,B. and DeRisi,J.L. (2002) Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray. Genome Biol., 4, R9.
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    • Bozdech, Z.1    Zhu, J.2    Joachimiak, M.P.3    Cohen, F.E.4    Pulliam, B.5    DeRisi, J.L.6
  • 3
    • 0012951839 scopus 로고    scopus 로고
    • Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3′ untranslated region
    • Chen,H. and Sharp,B.M. (2002) Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3′ untranslated region. BMC Bioinformatics, 3, 27.
    • (2002) BMC Bioinformatics , vol.3 , pp. 27
    • Chen, H.1    Sharp, B.M.2
  • 4
    • 0034669668 scopus 로고    scopus 로고
    • Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays
    • Kane,M.D., Jatkoe,T.A., Stumpf,C.R., Lu,J., Thomas,J.D. and Madore,S.J. (2000) Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays. Nucleic Acid Res., 28, 4552-4557.
    • (2000) Nucleic Acid Res. , vol.28 , pp. 4552-4557
    • Kane, M.D.1    Jatkoe, T.A.2    Stumpf, C.R.3    Lu, J.4    Thomas, J.D.5    Madore, S.J.6
  • 5
    • 0035190608 scopus 로고    scopus 로고
    • Selection of optimal DNA oligos for gene expression arrays
    • Li,F. and Stormo,G.D. (2001) Selection of optimal DNA oligos for gene expression arrays. Bioinformatics, 17, 1067-1076.
    • (2001) Bioinformatics , vol.17 , pp. 1067-1076
    • Li, F.1    Stormo, G.D.2
  • 7
    • 0036140076 scopus 로고    scopus 로고
    • MELTING, computing the melting temperature of nucleic acid duplex
    • Novère,N.L. (2001) MELTING, computing the melting temperature of nucleic acid duplex. Bioinformatics, 17, 1226-1227.
    • (2001) Bioinformatics , vol.17 , pp. 1226-1227
    • Novère, N.L.1
  • 8
    • 0036208669 scopus 로고    scopus 로고
    • OligoArray: Genome-scale oligonucleotide design for microarrays
    • Rouillard,J.-M., Herbert,C.J. and Zuker,M. (2002) OligoArray: genome-scale oligonucleotide design for microarrays. Bioinformatics, 18, 486-487.
    • (2002) Bioinformatics , vol.18 , pp. 486-487
    • Rouillard, J.-M.1    Herbert, C.J.2    Zuker, M.3
  • 9
    • 0032539693 scopus 로고    scopus 로고
    • Unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
    • SantaLucia,J. Jr. (1998) Unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl Acad. Sci., USA, 95, 1460-1465.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 1460-1465
    • SantaLucia Jr., J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.