Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics

BMC Bioinformatics

Volumn 5, Issue , 2004, Pages

  Reeder, Jens ^a   Giegerich, Robert ^a  

^a BIELEFELD UNIVERSITY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

NP COMPLETE; OPTIMAL STRUCTURES; POLYNOMIAL-TIME ALGORITHMS; PSEUDO-KNOTS; RNA SECONDARY STRUCTURE PREDICTION; RNA SEQUENCES; SPACE ALGORITHMS; THERMODYNAMIC MODEL;

RNA; STRUCTURAL OPTIMIZATION; THERMODYNAMICS;

ALGORITHMS;

TRANSFER RNA; RNA; VIRUS RNA;

ARTICLE; BASE PAIRING; COMPUTER MODEL; COMPUTER PREDICTION; COMPUTER PROGRAM; CONTROLLED STUDY; ENERGY TRANSFER; GENETIC ALGORITHM; HUMAN; INTERMETHOD COMPARISON; NONHUMAN; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN FUNCTION; PROTEIN SECONDARY STRUCTURE; RELIABILITY; RNA ANALYSIS; RNA SEQUENCE; RNA STRUCTURE; THERMODYNAMICS; TIME; ALGORITHM; BIOLOGICAL MODEL; BIOLOGY; CHEMISTRY; CONFORMATION; EVALUATION STUDY; GENETICS; HEPATITIS DELTA VIRUS; PREDICTIVE VALUE; PROCEDURES;

ALGORITHMS; COMPUTATIONAL BIOLOGY; HEPATITIS DELTA VIRUS; MODELS, GENETIC; NUCLEIC ACID CONFORMATION; PREDICTIVE VALUE OF TESTS; RNA; RNA, VIRAL; THERMODYNAMICS;

EID: 13244252326     PISSN: 14712105     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2105-5-104     Document Type: Article

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