Mitochondrial DNA sequence variation in deep-sea bamboo coral (Keratoisidinae) species in the southwest and northwest Pacific Ocean

Marine Biology

Volumn 144, Issue 2, 2004, Pages 253-261

  Smith, P J ^a   McVeagh, S M ^a   Mingoia, J T ^b   France, S C ^b  

^a NATIONAL INSTITUTE OF WATER AND ATMOSPHERIC RESEARCH   (New Zealand)

^b School of Business   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CORAL; DEEP SEA; GENETIC VARIATION; MITOCHONDRIAL DNA; POPULATION GENETICS;

PACIFIC OCEAN; PACIFIC OCEAN (WEST);

ALCYONACEA; ANTHOZOA; INSERTION SEQUENCES; ISIDIDAE; SWIFTIA EXSERTA;

EID: 1242322075     PISSN: 00253162     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00227-003-1206-5     Document Type: Article

References (41)

1. Alderslade P (1998) Revisionary systematics in the gorgonian family Isididae, with descriptions of numerous new taxa (Coelenterata: Octocororallia). Rec West Aust Mus 55:1-359
2. Ayre DJ, Hughes TP (2000) Genotypic diversity and gene flow in brooding and spawning corals along the Great Barrier Reef, Australia. Evolution 54:1590-1605
3. Bayer FM (1990) A new isidid octocoral (Anthozoa: Gorgonacea) from New Caledonia, with descriptions of other new species from elsewhere in the Pacific Ocean. Proc Biol Soc Wash 103:205-228
4. Breeze H (1997) Distribution and status of deep sea corals off Nova Scotia. Marine Issues Committee Special Publication No. 1. Ecology Action Centre, Halifax
5. Bucklin A, Wilson RR, Smith KL (1987) Genetic differentiation of seamount and basin populations of the deep-sea amphipod Eurythenes gryllus. Deep-Sea Res 34:1795-1810
6. Burton RS (1983) Protein polymorphisms and genetic differentiation of marine invertebrate populations. Mar Biol Lett 4:193-206
7. Chase MR, Etter RJ, Rex MA, Quattro JM (1998) Bathymetric patterns of genetic differentiation in a deep-sea protobranch bivalve, Deminucula atacellana. Mar Biol 131:301-308
8. Chave EH, Jones AT (1991) Deep-water megafauna of the Kohala and Haleakala slopes, Alenuihaha Channel, Hawaii. Deep-Sea Res 38:781-803
9. Clark M, O'Shea S, Wood B, Wright I (2000) Seamount management. A report on seamounts potentially suitable for consideration under the MFish seamount management strategy. Report prepared for The New Zealand Ministry of Fisheries, April 2000
10. France SC, Hoover LL (2001) Analysis of variation in mitochondrial DNA sequences (ND3, ND4L, MSH) among Octocorallia (= Alcyonaria) (Cnidaria: Anthozoa). Bull Biol Soc Wash 10:110-118
11. France SC, Hoover LL (2002) DNA sequences of the mitochondrial COI gene have low levels of divergence among deep-sea octocorals (Cnidaria: Anthozoa). Hydrobiologia 471:149-155
12. France SC, Kocher TD (1996) Geographic and bathymetric patterns of mitochondrial 16S rRNA sequence divergence among deep-sea amphipods, Eurythenes gryllus. Mar Biol 126:633-643
13. France SC, Rosel PE, Agenbroad EJ, Mullineaux LS, Kocher TD (1996) DNA sequence variation of mitochondrial large sub-unit rRNA provides support for a two-subclass organization of the Anthozoa (Cnidaria). Mol Mar Biol Biotechnol 5:15-28
14. Genin A, Dayton PK, Lonsdale PF, Speiss FN (1986) Corals on seamount peaks provide evidence of current acceleration over deep-sea topography. Nature 322:59-61
15. Grant R (1976) The marine fauna of New Zealand: Isididae (Octocorallia: Gorgonacea) from New Zealand and the Antarctic. NZ Oceanogr Inst Mem 66:1-54
16. Grigg RW (1993) Precious coral fisheries of Hawaii and the US Pacific Islands. Mar Fish Rev 55:50-60
17. Grigg RW, Bayer FM (1976) Present knowledge of the systematics and zoogeography of the order Gorgonacea in Hawaii. Pac Sci 30:167-175
18. Hall TA (1999) Bioedit: a user friendly biological sequence alignment editor and analysis programme for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98
19. Jensen A, Frederikesen R (1992) The fauna associated with the bank-forming deepwater coral Lophelia pertusa (Scleractinaria) on the Faroe Shelf. Sarsia 77:53-69
20. Koslow JA, Gowlett-Holmes K (1998) The seamount fauna off southern Tasmania: benthic communities, their conservation and impacts of trawling. Report to the Environmental Australia Fisheries Commission, 95/058
21. Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: Molecular evolutionary genetics analysis software, version 2.01. Arizona State University, Tempe, Arizona, USA
22. Lasker HR, Kim K (1996) Larval development and settlement behaviour of the gorgonian coral Plexaura kuna. J Exp Mar Biol Ecol 207:161-175
23. LePard A (2003) Analysis of variation in the mitochondrial encoded msh1 in the genus Leptogorgia (Cnidaria: Octocorallia) and implications for population and systematic studies. M.S. thesis, College of Charleston
24. Marsh AG, Mullineaux LS, Young CM, Manahan DT (2001) Larval dispersal potential of the tubeworm Riftia pachyptila at deep-sea hydrothermal vents. Nature 411:77-80
25. Muzik K (1978) A bioluminescent gorgonian, Lepidisis olapa, new species (Coelentrata: Octocorallia) from Hawaii. Bull Mar Sci 28:735-741
26. Parker PG, Snow AA, Schug MD, Booton GC, Fuerst PA (1998) What molecules can tell us about populations: choosing and using a molecular marker. Ecology 79:361-382
27. Parsons KE (1996) The genetic effects of larval dispersal depend on spatial scale and habitat characteristics. Mar Biol 126:403-414
28. Probert PK, McKnight DG, Groove SL (1997) Benthic invertebrate bycatch from a deep-water trawl fishery, Chatham Rise, New Zealand. Aquat Conserv: Mar Freshw Ecosyst 7:27-40
29. Richer de Forges B, Koslow JA, Poore JCB (2000) Diversity and endemism of the benthic seamount fauna in the southwest Pacific. Nature 405:944-947
30. Richmond RH (1987) Energetics, competency, and long-distance dispersal of planula larvae of the coral Pocillopora damicornis. Mar Biol 93:527-533
31. Roberts CM (2002) Deep impact: the rising toll of fishing in the deep sea. Trends Ecol Evol 17:242-245
32. Rogers AD (1994) The Biology of seamounts. Adv Mar Biol 30:305-350
33. Sánchez JA, McFadden CS, France SC, Lasker HR (2003) Molecular phylogenetic analyses of shallow-water Caribbean octocorals. Mar Biol (in press)
34. Shearer TL, van Oppen MJH, Romano SL, Wörheide G (2002) Slow mitochondrial DNA sequence evolution in the Anthozoa (Cnidaria). Mol Ecol 11:2475-2487
35. Simon CF, Frati F, Beckenbach A, Crespi B, Liu H, Flook P (1994) Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am 87:651-701
36. Taggart JB, Hynes RA, Prodohl PA, Ferguson A (1992) A simplified protocol for routine total DNA isolation from salmonid fishes. J Fish Biol 40:963-965
37. Tasmania (1999) Tasmanian seamounts marine reserve. http:// www.environment.gov.au/marine/mpa/seamounts/index.html. Cited 8 May 2003.
38. Tendel SO (1992) The North Atlantic distribution of the octocoral Paragorgia arborea (L. 1758) (Cnidaria, Anthozoa). Sarsia 77:213-217
39. Vrijenhoek RC (1997) Gene flow and genetic diversity in naturally fragmented metapopulations of deep-sea hydrothermal vent animals. J Hered 88:285-293
40. Wilson JR, Harrison PL (1998) Settlement competency periods of larvae of three species of scleractinian corals. Mar Biol 131:339-345
41. Wilson RR, Kaufman RS (1987) Seamount biota and biogeography. Geophys Monogr 43:355-377