메뉴 건너뛰기




Volumn 9, Issue 12, 2002, Pages 1315-1321

Sequence-dependent DNA dynamics by scanning force microscopy time-resolved imaging

Author keywords

[No Author keywords available]

Indexed keywords

CIRCULAR DNA; DNA;

EID: 12244267728     PISSN: 10745521     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1074-5521(02)00282-X     Document Type: Article
Times cited : (16)

References (27)
  • 2
    • 0021268779 scopus 로고
    • The locus of sequence-directed and protein-induced DNA bending
    • Wu H.M., Crothers D.M. The locus of sequence-directed and protein-induced DNA bending. Nature. 308:1984;509-513.
    • (1984) Nature , vol.308 , pp. 509-513
    • Wu, H.M.1    Crothers, D.M.2
  • 3
    • 0022477409 scopus 로고
    • DNA bending at adenine-thymine tracts
    • Koo H.S., Wu H.M., Crothers D.M. DNA bending at adenine-thymine tracts. Nature. 320:1986;501-506.
    • (1986) Nature , vol.320 , pp. 501-506
    • Koo, H.S.1    Wu, H.M.2    Crothers, D.M.3
  • 4
    • 0022418377 scopus 로고
    • Sequence dependence of the curvature of DNA: A test of the phasing hypothesis
    • Hagerman P.J. Sequence dependence of the curvature of DNA. a test of the phasing hypothesis Biochemistry. 24:1985;7033-7036.
    • (1985) Biochemistry , vol.24 , pp. 7033-7036
    • Hagerman, P.J.1
  • 5
    • 0022527052 scopus 로고
    • Sequence-directed curvature of DNA
    • Hagerman P.J. Sequence-directed curvature of DNA. Nature. 321:1986;449-450.
    • (1986) Nature , vol.321 , pp. 449-450
    • Hagerman, P.J.1
  • 6
    • 0024121469 scopus 로고
    • Calibration of DNA curvature and a unified description of sequence-directed bending
    • Koo H.S., Crothers D.M. Calibration of DNA curvature and a unified description of sequence-directed bending. Proc. Natl. Acad. Sci. USA. 85:1988;1763-1767.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 1763-1767
    • Koo, H.S.1    Crothers, D.M.2
  • 7
    • 0001191247 scopus 로고
    • DNA flexibility studied by covalent closure of short fragments into circles
    • Shore D., Langowski J., Baldwin R.L. DNA flexibility studied by covalent closure of short fragments into circles. Proc. Natl. Acad. Sci. USA. 78:1981;4833-4837.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 4833-4837
    • Shore, D.1    Langowski, J.2    Baldwin, R.L.3
  • 8
    • 0021022977 scopus 로고
    • Energetics of DNA twisting. I. Relation between twist and cyclization probability
    • Shore D., Baldwin R.L. Energetics of DNA twisting. I. Relation between twist and cyclization probability. J. Mol. Biol. 170:1983;957-981.
    • (1983) J. Mol. Biol. , vol.170 , pp. 957-981
    • Shore, D.1    Baldwin, R.L.2
  • 9
    • 0026766290 scopus 로고
    • Protein induced bending and DNA cyclization
    • Kahn J.D., Crothers D.M. Protein induced bending and DNA cyclization. Proc. Natl. Acad. Sci. USA. 89:1992;6343-6347.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 6343-6347
    • Kahn, J.D.1    Crothers, D.M.2
  • 10
    • 0034610179 scopus 로고    scopus 로고
    • Global structure and mechanical properties of a 10-bp nucleosome positioning motif
    • Roychoudhury M., Sitlani A., Lapham J., Crothers D.M. Global structure and mechanical properties of a 10-bp nucleosome positioning motif. Proc. Natl. Acad. Sci. USA. 97:2000;13608-13613.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 13608-13613
    • Roychoudhury, M.1    Sitlani, A.2    Lapham, J.3    Crothers, D.M.4
  • 11
    • 0030272594 scopus 로고    scopus 로고
    • Sometimes a great motion: The application of transient electric birefringence to the study of macromolecular structure
    • Hagerman P.J. Sometimes a great motion. the application of transient electric birefringence to the study of macromolecular structure Curr. Opin. Struct. Biol. 6:1996;643-646.
    • (1996) Curr. Opin. Struct. Biol. , vol.6 , pp. 643-646
    • Hagerman, P.J.1
  • 12
    • 0025355750 scopus 로고
    • Electron microscopy mapping of pBR322 DNA curvature. Comparison with theoretical models
    • Muzard G., Theveny B., Revet B. Electron microscopy mapping of pBR322 DNA curvature. Comparison with theoretical models. EMBO J. 9:1990;1289-1298.
    • (1990) EMBO J. , vol.9 , pp. 1289-1298
    • Muzard, G.1    Theveny, B.2    Revet, B.3
  • 13
    • 0029618936 scopus 로고
    • Determination of DNA persistence length by cryo-electron microscopy. Separation of the static and dynamic contributions to the apparent persistence length of DNA
    • Bednar J., Furrer P., Katritch V., Stasiak A.Z., Dubochet J., Stasiak A. Determination of DNA persistence length by cryo-electron microscopy. Separation of the static and dynamic contributions to the apparent persistence length of DNA. J. Mol. Biol. 254:1995;579-594.
    • (1995) J. Mol. Biol. , vol.254 , pp. 579-594
    • Bednar, J.1    Furrer, P.2    Katritch, V.3    Stasiak, A.Z.4    Dubochet, J.5    Stasiak, A.6
  • 14
    • 0030596081 scopus 로고    scopus 로고
    • Scanning force microscopy of DNA deposited onto mica: Equilibration versus kinetic trapping studied by statistical polymer chain analysis
    • Rivetti C., Guthold M., Bustamante C. Scanning force microscopy of DNA deposited onto mica. equilibration versus kinetic trapping studied by statistical polymer chain analysis J. Mol. Biol. 264:1996;919-932.
    • (1996) J. Mol. Biol. , vol.264 , pp. 919-932
    • Rivetti, C.1    Guthold, M.2    Bustamante, C.3
  • 15
    • 0001261479 scopus 로고    scopus 로고
    • Conformational fluctuations of supercoiled DNA molecules observed on real time with a scanning force microscope
    • Zuccheri G., Dame R.Th., Aquila M., Muzzalupo I., Samorì B. Conformational fluctuations of supercoiled DNA molecules observed on real time with a scanning force microscope. Appl. Phys. A: Mater. Sci. Process. 66:1998;S585-S589.
    • (1998) Appl. Phys. A: Mater. Sci. Process , vol.66
    • Zuccheri, G.1    Dame, R.Th.2    Aquila, M.3    Muzzalupo, I.4    Samorì, B.5
  • 17
    • 0036840332 scopus 로고    scopus 로고
    • Sequence-dependent DNA curvature and flexibility from scanning force microscopy images
    • Scipioni A., Anselmi C., Zuccheri G., Samorì B., De Santis P. Sequence-dependent DNA curvature and flexibility from scanning force microscopy images. Biophys. J. 83:2002;2408-2418.
    • (2002) Biophys. J. , vol.83 , pp. 2408-2418
    • Scipioni, A.1    Anselmi, C.2    Zuccheri, G.3    Samorì, B.4    De Santis, P.5
  • 21
    • 0030561678 scopus 로고    scopus 로고
    • Deposition of supercoiled DNA on mica for scanning force microscopy imaging
    • Samorì B., Muzzalupo I., Zuccheri G. Deposition of supercoiled DNA on mica for scanning force microscopy imaging. Scanning Microsc. 10:1996;953-962.
    • (1996) Scanning Microsc. , vol.10 , pp. 953-962
    • Samorì, B.1    Muzzalupo, I.2    Zuccheri, G.3
  • 22
    • 0000579305 scopus 로고    scopus 로고
    • DNA persistence length revisited
    • Lu Y., Weers B., Stellwagen N.C. DNA persistence length revisited. Biopolymers. 61:2002;261-275.
    • (2002) Biopolymers , vol.61 , pp. 261-275
    • Lu, Y.1    Weers, B.2    Stellwagen, N.C.3
  • 23
    • 0025078851 scopus 로고
    • Validity of the nearest-neighbor approximation in the evaluation of the electrophoretic manifestations of DNA curvature
    • De Santis P., Palleschi A., Savino M., Scipioni A. Validity of the nearest-neighbor approximation in the evaluation of the electrophoretic manifestations of DNA curvature. Biochemistry. 29:1990;9269-9273.
    • (1990) Biochemistry , vol.29 , pp. 9269-9273
    • De Santis, P.1    Palleschi, A.2    Savino, M.3    Scipioni, A.4
  • 25
    • 0026860091 scopus 로고
    • Imaging steep, high structures by scanning force microscopy with electron beam deposited tips
    • Keller D.J., Chou C.-C. Imaging steep, high structures by scanning force microscopy with electron beam deposited tips. Prog. Surf. Sci. 268:1992;333-339.
    • (1992) Prog. Surf. Sci. , vol.268 , pp. 333-339
    • Keller, D.J.1    Chou, C.-C.2
  • 26
    • 0030033874 scopus 로고    scopus 로고
    • Vertical dimension of hydrated biological samples in tapping mode scanning force microscopy
    • Schabert F.A., Rabe J.P. Vertical dimension of hydrated biological samples in tapping mode scanning force microscopy. Biophys. J. 70:1996;1514-1520.
    • (1996) Biophys. J. , vol.70 , pp. 1514-1520
    • Schabert, F.A.1    Rabe, J.P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.