Performance evaluation of SNPs machine-learning workload on Intel® Pentium® 4 hyper-threading architectures

Proceedings of the IASTED International Conference on Parallel and Distributed Computing and Systems

Volumn 16, Issue , 2004, Pages 790-795

  Ge, Steven ^a   Song, Justin ^a   Lai, Chunrong ^a   Li, Eric ^a   Hu, Wei ^a   Tian, Xinmin ^b  

^a INTEL CHINA RESEARCH CENTER   (China)

^b INTEL CORPORATION   (United States)

Author keywords

Hyper threading; Machine learning; OpenMP; Optimization; Performance evaluation; Thread level parallelism

Indexed keywords

COMPUTER OPERATING SYSTEMS; CRYPTOGRAPHY; LEARNING SYSTEMS; OPTIMIZATION; PROGRAM COMPILERS; WORLD WIDE WEB;

HYPER-THREADING; PERFORMANCE EVALUATION; THREAD-LEVEL PARALLELISM;

PROGRAM PROCESSORS;

EID: 11844284913     PISSN: 10272658     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (8)

1. Xinmin Tian, Aart Bik, Milind Girkar, Paul Grey, Hideki Saito, Ernesto Su, "Intel® OpenMP* C++/Fortran Compiler for Hyper-Threading Technology: Implementation and Performance", Intel Technology Journal, Vol. 6, Q1, 2002 http://www.intel.com/technology/itj
2. Xinmin Tian, Milind Girkar, et al, "Compiler and Runtime Support for Running OpenMP Programs on Pentium- and Itanium-Architectures", The Eighth International Workshop on High-level Parallel Programming Models & Supportive Environments (HIPS'03), April 22-22, 2003, Nice, France, IEEE Computer Society 2003.
3. OpenMP Architecture Review Board, "OpenMP C and C++ Application Program Interface," Version 2.0, March 2002, http://www.openmp.org
4. OpenMP Architecture Review Board, "OpenMP Fortran Application Program Interface," Version 2.0, November 2000, http://www.openmp.org
5. Debbie Marr, Frank Binns, David L. Hill, Glenn Hinton, David A. Koufary, J. Alan Miller, and Michael Upton, "Hyper-Threading Technology Microarchitecture and Architecture," Intel Technology Journal, Vol. 6, Q1, 2002. http://www.intel.com/technology/iti
6. A. J. Brookes, H. Lehvaslaiho, M. Siegfried, J. G. Boehm, Y. P. Yuan, C. M. Sarkar, P. Bork and F. Ortigao, HGBASE: a database of SNPs and other variations in and around human genes, Nov. 28 (2000), pp. 356-360.
7. dbSNP database, http://www.ncbi.nlm.nih.gov/SNP/
8. Xi Ma, Jun Cai, Wei Hu, Yimin Zhang, Yanda Li and Xuegong Zhang, "Discovering Possible Context Dependences around SNP Sites in Human Genes with Bayesian Network Learning", Accepted by ICARCV 2004.