-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S.F., Madden, T.L., Schaffer, A.-A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res., 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.-A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
33645381619
-
-
BioPerl (2002) http://www.bioperl.org/.
-
(2002)
-
-
-
4
-
-
0000122499
-
On implementing the push-relabel method for the maximum flow problem
-
Cherkassky, B.V. and Goldberg, A.V. (1997) On implementing the push-relabel method for the maximum flow problem. Algorithmica, 19, 390-410.
-
(1997)
Algorithmica
, vol.19
, pp. 390-410
-
-
Cherkassky, B.V.1
Goldberg, A.V.2
-
6
-
-
33645410423
-
-
EBI Genomes Server (2001) http://www.ebi.ac.uk/genomes/.
-
(2001)
-
-
-
7
-
-
0035165304
-
Hybridization cross-reactivity with homologous gene families on glass cDNA microarrays
-
Evertsz, E.M., An-Young, J., Ruvolo, M.V., Lim, A.C. and Reynolds, M.A. (2001) Hybridization cross-reactivity with homologous gene families on glass cDNA microarrays. BioTechniques, 31, 1182-1192.
-
(2001)
BioTechniques
, vol.31
, pp. 1182-1192
-
-
Evertsz, E.M.1
An-Young, J.2
Ruvolo, M.V.3
Lim, A.C.4
Reynolds, M.A.5
-
8
-
-
0020890387
-
An efficient reduction technique for degree-constrained subgraph and bidirected network flow problems
-
ACM
-
Gabow, H.N. (1983) An efficient reduction technique for degree-constrained subgraph and bidirected network flow problems. Proceedings of the 15th ACM Symposium on the Theory of Computing (STOC'83). ACM, pp. 448-456.
-
(1983)
Proceedings of the 15th ACM Symposium on the Theory of Computing (STOC'83)
, pp. 448-456
-
-
Gabow, H.N.1
-
10
-
-
0018547323
-
An optimal solution for the channel-assigment problem
-
Gupta, U.I., Lee, D.T. and Leung, J.Y.-T. (1979) An optimal solution for the channel-assigment problem. IEEE Trans. Comput., c-28, 807-810.
-
(1979)
IEEE Trans. Comput.
, vol.C-28
, pp. 807-810
-
-
Gupta, U.I.1
Lee, D.T.2
Leung, J.Y.-T.3
-
11
-
-
0034669668
-
Assessment of sensitivity and specificity of oligonucleotide (50mer) microarrays
-
Kane, M.D., Jatkoe, T.A., Stumph, G.R., Lu, J., Thomas, J.D. and Madore, S.J. (2000) Assessment of sensitivity and specificity of oligonucleotide (50mer) microarrays. Nucleic Acids Res., 28, 4552-4557.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4552-4557
-
-
Kane, M.D.1
Jatkoe, T.A.2
Stumph, G.R.3
Lu, J.4
Thomas, J.D.5
Madore, S.J.6
-
12
-
-
33645383923
-
-
Manuscript in preparation
-
Kataja et al. (2002) Manuscript in preparation.
-
(2002)
-
-
Kataja1
-
13
-
-
0034565346
-
Computation and visualization of degenerate repeats in complete genomes
-
The AAAI Press
-
Kurtz, S., Ohlebusch, E., Schleiermacher, C., Stoye, J. and Giegerich, R. (2000) Computation and visualization of degenerate repeats in complete genomes. Proceedings of the 8th International Conference on Intelligent Systems for Molecular Biology (ISMB'00). The AAAI Press, pp. 228-238.
-
(2000)
Proceedings of the 8th International Conference on Intelligent Systems for Molecular Biology (ISMB'00)
, pp. 228-238
-
-
Kurtz, S.1
Ohlebusch, E.2
Schleiermacher, C.3
Stoye, J.4
Giegerich, R.5
-
14
-
-
0035890910
-
Reputer: The manifold applications of repeat analysis on a genomic scale
-
Kurz, S., Choudhuri, J.V., Ohlebusch, E., Schleiermacher, C., Stoye, J. and Giegerich, R. (2001) Reputer: the manifold applications of repeat analysis on a genomic scale. Nucleic Acids Res., 29, 4633-4642.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 4633-4642
-
-
Kurz, S.1
Choudhuri, J.V.2
Ohlebusch, E.3
Schleiermacher, C.4
Stoye, J.5
Giegerich, R.6
-
15
-
-
0035190608
-
Selection of optimal DNA oligos for gene expression arrays
-
Li, F. and Stormo, G.D. (2001) Selection of optimal DNA oligos for gene expression arrays. Bioinformatics, 17, 1067-1076.
-
(2001)
Bioinformatics
, vol.17
, pp. 1067-1076
-
-
Li, F.1
Stormo, G.D.2
-
16
-
-
10544256600
-
Expression monitoring by hybridization to high-density oligonucleotide arrays
-
Lockhart, D.J., Dong, H., Byrne, M.C., Follettie, M.T., Gallo, M.V., Chee, M.S., Mittmann, M., Wang, C., Kobayashi, M., Horton, H. and Brown, E.L. (1996) Expression monitoring by hybridization to high-density oligonucleotide arrays. Nat. Biotechnol., 14, 1675-1680.
-
(1996)
Nat. Biotechnol.
, vol.14
, pp. 1675-1680
-
-
Lockhart, D.J.1
Dong, H.2
Byrne, M.C.3
Follettie, M.T.4
Gallo, M.V.5
Chee, M.S.6
Mittmann, M.7
Wang, C.8
Kobayashi, M.9
Horton, H.10
Brown, E.L.11
-
17
-
-
0000541351
-
A fast bit-vector algorithm for approximate string matching based on dynamic programming
-
Myers, G. (1999) A fast bit-vector algorithm for approximate string matching based on dynamic programming. J. ACM, 46, 395-415.
-
(1999)
J. ACM
, vol.46
, pp. 395-415
-
-
Myers, G.1
-
20
-
-
0004222754
-
-
(1997). Code available
-
Rozen, S. and Skaletsky, H.J. (1996, 1997, 1998) Primer3. Code available at http://www-genome.wi.mit.edu/genome_software/other/primer3.html.
-
(1996)
Primer3
-
-
Rozen, S.1
Skaletsky, H.J.2
-
21
-
-
0028806048
-
Quantitative monitoring of gene expression patterns with a complementary DNA microarray
-
Schena, M., Shalon, D., Davis, R.W. and Brown, P.O. (1995) Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science, 270, 467-470.
-
(1995)
Science
, vol.270
, pp. 467-470
-
-
Schena, M.1
Shalon, D.2
Davis, R.W.3
Brown, P.O.4
-
22
-
-
33645396377
-
-
(2001) A method and test kit for quantitative and/or comparative assessment of variations in polynucleotide amounts in cell or tissue samples. Patent application Fi 20010041
-
Soderlund, H., Ilmen, M., Paloheimo, M., Kataja, K. and Takkinen, K. (2001) A method and test kit for quantitative and/or comparative assessment of variations in polynucleotide amounts in cell or tissue samples. Patent application Fi 20010041.
-
-
-
Soderlund, H.1
Ilmen, M.2
Paloheimo, M.3
Kataja, K.4
Takkinen, K.5
-
23
-
-
0023056744
-
Fast quantification of nucleic acid hybrids by affinity-based hybrid collection
-
Syvänen, A.-C., Laaksonen, M. and Soderlund, H. (1986) Fast quantification of nucleic acid hybrids by affinity-based hybrid collection. Nucleic Acids Res., 14, 5037-5048.
-
(1986)
Nucleic Acids Res.
, vol.14
, pp. 5037-5048
-
-
Syvänen, A.-C.1
Laaksonen, M.2
Soderlund, H.3
-
24
-
-
33645413550
-
Optimal multiplexing schemes for SNP genotyping
-
Tsalenko, A., Manisterski, E., Curry, B., Ben-Dor, A., Aumann, Y., Sampson, J., and Yakhini, Z. (2001) Optimal multiplexing schemes for SNP genotyping. 4th International Meeting on Single Nucleotide Polymorphism and Complex Genome Analysis (SNP 2001), 10-13 October 2001, Stocholm, Sweden (poster).
-
(2001)
4th International Meeting on Single Nucleotide Polymorphism and Complex Genome Analysis (SNP 2001), 10-13 October 2001, Stocholm, Sweden (Poster)
-
-
Tsalenko, A.1
Manisterski, E.2
Curry, B.3
Ben-Dor, A.4
Aumann, Y.5
Sampson, J.6
Yakhini, Z.7
|