메뉴 건너뛰기




Volumn 70, Issue 6, 2004, Pages 1043-1050

Molecular identification of red tide-causing microalga Heterosigma akashiwo strains based on their chloroplast DNA sequences

Author keywords

Chloroplast; Heterosigma akashiwo; Intergenic spacer region; Molecular identification

Indexed keywords

AKASHIWO; ALGAE; HETEROSIGMA AKASHIWO;

EID: 11144344492     PISSN: 09199268     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1444-2906.2004.00904.x     Document Type: Article
Times cited : (12)

References (32)
  • 1
    • 0007538879 scopus 로고
    • Mechanisms for outbreak of Heterosigma akashiwo red tide in Osaka Bay, Japan
    • Okaichi T, Anderson DM, Nemoto T (eds). Elsevier, New York
    • Yamochi S. Mechanisms for outbreak of Heterosigma akashiwo red tide in Osaka Bay, Japan. In: Okaichi T, Anderson DM, Nemoto T (eds). Red Tides. Elsevier, New York. 1989; 253-256.
    • (1989) Red Tides , pp. 253-256
    • Yamochi, S.1
  • 2
    • 0008898750 scopus 로고
    • Densities of dormant cells of the red tide flagellate Heterosigma akashiwo (Raphidophyceae) in bottom sediments of northern Hiroshima Bay, Japan
    • Imai I, Itakura S. Densities of dormant cells of the red tide flagellate Heterosigma akashiwo (Raphidophyceae) in bottom sediments of northern Hiroshima Bay, Japan. Bull. Jpn. Soc. Microb. Ecol. 1991; 6: 1-7.
    • (1991) Bull. Jpn. Soc. Microb. Ecol. , vol.6 , pp. 1-7
    • Imai, I.1    Itakura, S.2
  • 3
    • 0000784316 scopus 로고
    • Morphospecies vs. genospecies in toxic marine dinoflagellates: An analysis of Gymnodinium catenatum/ Gyrodinium impudicum and Alexandrium minutum/A. lusitanicum using antibodies, lectins, and gene sequences
    • Costas E, Zardoya R, Bautista J, Garrido A, Rojo C, Lopez-Rodas V. Morphospecies vs. genospecies in toxic marine dinoflagellates: An analysis of Gymnodinium catenatum/ Gyrodinium impudicum and Alexandrium minutum/A. lusitanicum using antibodies, lectins, and gene sequences. J. Phycol. 1995; 31: 801-807.
    • (1995) J. Phycol. , vol.31 , pp. 801-807
    • Costas, E.1    Zardoya, R.2    Bautista, J.3    Garrido, A.4    Rojo, C.5    Lopez-Rodas, V.6
  • 4
    • 0031805455 scopus 로고    scopus 로고
    • Identification and enumeration of cultured and wild Pseudo-nitzschia (Bacillariophyceae) using species-specific LSU rRNA-targeted fluorescent probes and filter-based whole cell hybridization
    • Miller PE, Sholin CA. Identification and enumeration of cultured and wild Pseudo-nitzschia (Bacillariophyceae) using species-specific LSU rRNA-targeted fluorescent probes and filter-based whole cell hybridization. J. Phycol. 1998; 34: 371-382.
    • (1998) J. Phycol. , vol.34 , pp. 371-382
    • Miller, P.E.1    Sholin, C.A.2
  • 5
    • 0032858672 scopus 로고    scopus 로고
    • Detection of the toxic dinoflagellate Alexandrium fundyense (Dinophyceae) with oligonucleotide and antibody probes: Variability in labeling intensity with physiological condition
    • Anderson DM, Kulis DM, Keafer AM. Detection of the toxic dinoflagellate Alexandrium fundyense (Dinophyceae) with oligonucleotide and antibody probes: Variability in labeling intensity with physiological condition. J. Phycol. 1999; 35: 870-883.
    • (1999) J. Phycol. , vol.35 , pp. 870-883
    • Anderson, D.M.1    Kulis, D.M.2    Keafer, A.M.3
  • 6
    • 0031879206 scopus 로고    scopus 로고
    • Algicidal effects of a novel marine Pseudoalteromonas isolate (class Proteobacteria, gamma subdivision) on harmful algal bloom species of the genera Chattonella, Gymnodinium, and Heterosigma
    • Lovejoy C, Bowman JP, Hallegraeff GM. Algicidal effects of a novel marine Pseudoalteromonas isolate (class Proteobacteria, gamma subdivision) on harmful algal bloom species of the genera Chattonella, Gymnodinium, and Heterosigma. Appl. Environ. Microbiol. 1998; 64: 2806-2813.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 2806-2813
    • Lovejoy, C.1    Bowman, J.P.2    Hallegraeff, G.M.3
  • 7
    • 18644383331 scopus 로고    scopus 로고
    • Ribotype analysis of HAKB (Heterosigma akashiwo-killing bacteria) strains isolated during termination period of a H. akashiwo bloom occurred in Osaka Bay
    • Yoshinaga I, Kim MC, Tsujino K, Nakajima M, Yamamoto K, Uchida A, Ishida Y. Ribotype analysis of HAKB (Heterosigma akashiwo-killing bacteria) strains isolated during termination period of a H. akashiwo bloom occurred in Osaka Bay. Fish. Sci. 1999; 65: 786-787.
    • (1999) Fish. Sci. , vol.65 , pp. 786-787
    • Yoshinaga, I.1    Kim, M.C.2    Tsujino, K.3    Nakajima, M.4    Yamamoto, K.5    Uchida, A.6    Ishida, Y.7
  • 8
    • 0033764619 scopus 로고    scopus 로고
    • Viral impacts on total abundance and clonal composition of the harmful bloom-forming phytoplankton Heterosigma akashiwo
    • Tarutani K, Nagasaki K, Yamaguchi M. Viral impacts on total abundance and clonal composition of the harmful bloom-forming phytoplankton Heterosigma akashiwo. Appl. Environ. Microbiol. 2000; 66: 4916-4920.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4916-4920
    • Tarutani, K.1    Nagasaki, K.2    Yamaguchi, M.3
  • 9
    • 1842527149 scopus 로고    scopus 로고
    • Temporal patterns in population genetic diversity of Prorocentrum micans (Dinophyceae)
    • Shankle AM, Mayali X, Franks PJS. Temporal patterns in population genetic diversity of Prorocentrum micans (Dinophyceae). J. Phycol. 2004; 40: 239-247.
    • (2004) J. Phycol. , vol.40 , pp. 239-247
    • Shankle, A.M.1    Mayali, X.2    Franks, P.J.S.3
  • 10
    • 0000690395 scopus 로고    scopus 로고
    • Analysis of Gymnodinium catenatum (Dinophyceae) using sequences of the 5.8S rDNA-ITS regions and random amplified polymorphic DNA
    • Adachi M, Sako Y, Ishida Y. Analysis of Gymnodinium catenatum (Dinophyceae) using sequences of the 5.8S rDNA-ITS regions and random amplified polymorphic DNA. Fish. Sci. 1997; 63: 701-707.
    • (1997) Fish. Sci. , vol.63 , pp. 701-707
    • Adachi, M.1    Sako, Y.2    Ishida, Y.3
  • 11
    • 0038826510 scopus 로고    scopus 로고
    • Phylogenic analysis of marine algicidal filamentous bacteria inferred from SSU rDNA and intergenic spacer regions
    • Iwamoto K, Yoshikawa T, Sakata T, Maeda H. Phylogenic analysis of marine algicidal filamentous bacteria inferred from SSU rDNA and intergenic spacer regions. Microb. Environ. 2001; 16: 213-221.
    • (2001) Microb. Environ. , vol.16 , pp. 213-221
    • Iwamoto, K.1    Yoshikawa, T.2    Sakata, T.3    Maeda, H.4
  • 12
    • 0036060997 scopus 로고    scopus 로고
    • Rapid identification of marine algae (Raphidophyceae) using three-primer PCR amplification of nuclear internal transcribed spacer (ITS) regions from fresh and archived material
    • Connell L. Rapid identification of marine algae (Raphidophyceae) using three-primer PCR amplification of nuclear internal transcribed spacer (ITS) regions from fresh and archived material. Phycologia 2002; 41: 15-21.
    • (2002) Phycologia , vol.41 , pp. 15-21
    • Connell, L.1
  • 13
    • 0036823140 scopus 로고    scopus 로고
    • Relationships between Australian and northern hemisphere Gymnopilus species II. A preliminary phylogeny of species of Gymnopilus and related genera based on internal transcribed spacer (ITS) region of ribosomal DNA
    • Rees BJ, Zuccarello GC, Orlovich DA. Relationships between Australian and northern hemisphere Gymnopilus species II. A preliminary phylogeny of species of Gymnopilus and related genera based on internal transcribed spacer (ITS) region of ribosomal DNA. Mycotaxon 2002; 84: 93-110.
    • (2002) Mycotaxon , vol.84 , pp. 93-110
    • Rees, B.J.1    Zuccarello, G.C.2    Orlovich, D.A.3
  • 14
    • 0001410942 scopus 로고    scopus 로고
    • Nuclear ITS region of the alga Heterosigma akashiwo (Chromophyte: Raphidophyceae) is identical in isolates from Atlantic and Pacific basins
    • Connell LB. Nuclear ITS region of the alga Heterosigma akashiwo (Chromophyte: Raphidophyceae) is identical in isolates from Atlantic and Pacific basins. Mar. Biol. 2000; 136: 953-960.
    • (2000) Mar. Biol. , vol.136 , pp. 953-960
    • Connell, L.B.1
  • 15
    • 0024623412 scopus 로고
    • Chloroplast ribosomal DNA organization in the chromophytic alga Olisthodiscus luteus
    • Delaney TP, Cattolico RA. Chloroplast ribosomal DNA organization in the chromophytic alga Olisthodiscus luteus. Curr. Genet. 1992; 15: 221-229.
    • (1992) Curr. Genet. , vol.15 , pp. 221-229
    • Delaney, T.P.1    Cattolico, R.A.2
  • 16
    • 0024698891 scopus 로고
    • The small subunit of ribulose-1,5-bisphosphate carboxylase is plastid-encoded in the chlorophyll c-containing alga Cryptomonas phi
    • Douglas SE, Durnford DG. The small subunit of ribulose-1,5-bisphosphate carboxylase is plastid-encoded in the chlorophyll c-containing alga Cryptomonas phi. Plant Mol. Biol. 1989; 13: 13-20.
    • (1989) Plant Mol. Biol. , vol.13 , pp. 13-20
    • Douglas, S.E.1    Durnford, D.G.2
  • 17
    • 0028821196 scopus 로고
    • psbA in the marine chromophyte, Heterosigma carterae: Evolutionary analysis and comparative structure of the D1 carboxy terminus
    • Hardison LK, Boczar BA, Cattolico RA. psbA in the marine chromophyte, Heterosigma carterae: Evolutionary analysis and comparative structure of the D1 carboxy terminus. Am. J. Bot. 1995; 82: 893-902.
    • (1995) Am. J. Bot. , vol.82 , pp. 893-902
    • Hardison, L.K.1    Boczar, B.A.2    Cattolico, R.A.3
  • 18
    • 0030444020 scopus 로고    scopus 로고
    • Identity of the endosymbiont of Peridinium foliaceum (Pyrrophyta): Analysis of the rbcLS operon
    • Chesnick JM, Morden CW, Schmieg AM. Identity of the endosymbiont of Peridinium foliaceum (Pyrrophyta): Analysis of the rbcLS operon. J. Phycol. 1996; 32: 850-857.
    • (1996) J. Phycol. , vol.32 , pp. 850-857
    • Chesnick, J.M.1    Morden, C.W.2    Schmieg, A.M.3
  • 19
    • 0031423553 scopus 로고    scopus 로고
    • A molecular phylogeny of the heterokont algae based on analyses of chloroplast-encoded rbcL sequence data
    • Daugbjerg N, Andersen RA. A molecular phylogeny of the heterokont algae based on analyses of chloroplast-encoded rbcL sequence data. J. Phycol. 1997; 33: 1031-1041.
    • (1997) J. Phycol. , vol.33 , pp. 1031-1041
    • Daugbjerg, N.1    Andersen, R.A.2
  • 20
    • 0031964656 scopus 로고    scopus 로고
    • Phylogenetic diversity of ultraplankton plastid small-subunit rRNA genes recovered in environmental nucleic acid samples from the Pacific and Atlantic coasts of the United States
    • Rappe MS, Suzuki MT, Vergin KL, Giovannoni SJ. Phylogenetic diversity of ultraplankton plastid small-subunit rRNA genes recovered in environmental nucleic acid samples from the Pacific and Atlantic coasts of the United States. Appl. Environ. Microbiol. 1998; 64: 294-303.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 294-303
    • Rappe, M.S.1    Suzuki, M.T.2    Vergin, K.L.3    Giovannoni, S.J.4
  • 21
    • 0031758603 scopus 로고    scopus 로고
    • Algal phylogeny and the origin of land plants
    • Bhattacharya D, Medlin L. Algal phylogeny and the origin of land plants. Plant Physiol. 1998; 116: 9-15.
    • (1998) Plant Physiol. , vol.116 , pp. 9-15
    • Bhattacharya, D.1    Medlin, L.2
  • 22
    • 0942267960 scopus 로고    scopus 로고
    • Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. divaricarpa, and A. holboellii (Brassicaceae)
    • Dobe CH, Mitchell-Olds T, Koch MA. Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. divaricarpa, and A. holboellii (Brassicaceae). Mol. Ecol. 2004; 13: 349-370.
    • (2004) Mol. Ecol. , vol.13 , pp. 349-370
    • Dobe, C.H.1    Mitchell-Olds, T.2    Koch, M.A.3
  • 23
    • 0242582442 scopus 로고    scopus 로고
    • Molecular evolution of insertions and deletion in the chloroplast genome of Silene
    • Ingvarsson PK, Ribstein S, Taylor DR. Molecular evolution of insertions and deletion in the chloroplast genome of Silene. Mol. Biol. Evol. 2003; 20: 1737-1740.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 1737-1740
    • Ingvarsson, P.K.1    Ribstein, S.2    Taylor, D.R.3
  • 24
    • 0031961180 scopus 로고    scopus 로고
    • Evolutionary divergence in the red algae Caloglossa leprieurii and C. apomeiotica
    • Kamiya M, West JA, King JR, Zuccarello GC, Tanaka J, Hara Y. Evolutionary divergence in the red algae Caloglossa leprieurii and C. apomeiotica. J. Phycol. 1998; 34: 361-370.
    • (1998) J. Phycol. , vol.34 , pp. 361-370
    • Kamiya, M.1    West, J.A.2    King, J.R.3    Zuccarello, G.C.4    Tanaka, J.5    Hara, Y.6
  • 25
    • 84989660647 scopus 로고
    • A molecular and morphological analysis of the Gymnogongrus devoniensis (Rhodophyta) complex in the North Atlantic
    • Maggs CA, Douglas SE, Fenety J, Bird CJ. A molecular and morphological analysis of the Gymnogongrus devoniensis (Rhodophyta) complex in the North Atlantic. J. Phycol. 1992; 28: 214-232.
    • (1992) J. Phycol. , vol.28 , pp. 214-232
    • Maggs, C.A.1    Douglas, S.E.2    Fenety, J.3    Bird, C.J.4
  • 26
    • 0031447466 scopus 로고    scopus 로고
    • Hybridization studies in Bostrychia: 2. Correlation of crossing data and plastid DNA sequence data within B. radicans and B. moritziana (Ceramiales, Rhodophyta)
    • Zuccarello GC, West JA. Hybridization studies in Bostrychia: 2. Correlation of crossing data and plastid DNA sequence data within B. radicans and B. moritziana (Ceramiales, Rhodophyta). Phycologia 1997; 36: 293-304.
    • (1997) Phycologia , vol.36 , pp. 293-304
    • Zuccarello, G.C.1    West, J.A.2
  • 27
    • 11144250889 scopus 로고    scopus 로고
    • Pigment analysis of marine microalgae by TLC and HPLC methods
    • Akase S, Yoshikawa T, Sakata T. Pigment analysis of marine microalgae by TLC and HPLC methods. Suisanzoshoku 1999; 47: 511-518.
    • (1999) Suisanzoshoku , vol.47 , pp. 511-518
    • Akase, S.1    Yoshikawa, T.2    Sakata, T.3
  • 28
    • 0001810352 scopus 로고
    • Extraction of DNA from plant tissues
    • Gelvin B, Schilperoort RA (eds). Kluwer Academic Publishers, Belgium
    • Rogers SO, Bendich AJ. Extraction of DNA from plant tissues. In: Gelvin B, Schilperoort RA (eds). Plant Molecular Biology Manual. Kluwer Academic Publishers, Belgium. 1988; A6.1-A6.10.
    • (1988) Plant Molecular Biology Manual
    • Rogers, S.O.1    Bendich, A.J.2
  • 29
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The Clustal X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1997; 24: 4876-4882.
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 31
    • 0026564085 scopus 로고
    • The Calvin cycle enzyme pentose-5-phosphate 3-epimerase is encoded within the cfx operons of the chemoautotroph Alcaligenes eutrophus
    • Kusian B, Yoo JG, Bednarski R, Bowien B. The Calvin cycle enzyme pentose-5-phosphate 3-epimerase is encoded within the cfx operons of the chemoautotroph Alcaligenes eutrophus. J. Bacteriol. 1992; 174: 7337-7344.
    • (1992) J. Bacteriol. , vol.174 , pp. 7337-7344
    • Kusian, B.1    Yoo, J.G.2    Bednarski, R.3    Bowien, B.4
  • 32
    • 18544401441 scopus 로고    scopus 로고
    • Analysis of genetic diversity of Furcellaria lumbricalis (Gigartinales, Rhodophyta) in the Baltic Sea by RAPD-PCR technique
    • Valatka SM, Mäkinen A, Yli-Mattila T. Analysis of genetic diversity of Furcellaria lumbricalis (Gigartinales, Rhodophyta) in the Baltic Sea by RAPD-PCR technique. Phycologia 2000; 39: 109-117.
    • (2000) Phycologia , vol.39 , pp. 109-117
    • Valatka, S.M.1    Mäkinen, A.2    Yli-Mattila, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.