A theoretical study on effect of the initial redox state of cytochrome b 559 on maximal chlorophyll fluorescence level (F M): Implications for photoinhibition of photosystem II

Journal of Theoretical Biology

Volumn 233, Issue 2, 2005, Pages 287-300

  Lazár, Dušan ^a   Ilík, Petr ^a   Kruk, Jerzy ^b   Strzałka, Kazimierz ^b   Nauš, Jan ^a  

^a PALACKÝ UNIVERSITY   (Czech Republic)

^b JAGIELLONIAN UNIVERSITY   (Poland)

Author keywords

Chlorophyll fluorescence induction; Cytochrome b 559; DCMU; Photoinhibition; Reversible radical pair model

Indexed keywords

CHLOROPHYLL; CYTOCHROME B559;

CYTOCHROME; PHOTOINHIBITION;

ARTICLE; CHEMICAL REACTION; ELECTRON TRANSPORT; ENERGY; FLUORESCENCE; METABOLIC REGULATION; NONHUMAN; OXIDATION REDUCTION REACTION; PHOTOINHIBITION; PHOTOSYSTEM II; PRIORITY JOURNAL; PROCESS MODEL; SIMULATION; THEORETICAL MODEL; THEORETICAL STUDY;

CHLOROPHYLL; CYTOCHROME B GROUP; ELECTRON TRANSPORT; FLUORESCENCE; OXIDATION-REDUCTION; PHOTOSYNTHETIC REACTION CENTER COMPLEX PROTEINS; PHOTOSYSTEM II PROTEIN COMPLEX;

EID: 11144316630     PISSN: 00225193     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jtbi.2004.10.015     Document Type: Article

References (98)

1. J.M. Anderson, Y.-I. Park, and W.S. Chow Unifying model for the photoinactivation of photosystem II in vivo under steady-state photosynthesis Photosynth. Res. 56 1998 1 13
2. D.I. Arnon, and G.M.-S. Tang Cytochrome b-559 and proton conductance in oxygenic photosynthesis Proc. Natl Acad. Sci. USA 85 1988 9424 9528
3. E. Baake, and J.P. Schlöder Modelling the fast fluorescence rise of photosynthesis Bull. Math. Biol. 54 1992 999 1021
4. 559 in the protection against donor and acceptor side photoinhibition Proc. Natl Acad. Sci. USA 90 1993 10942 10946
5. D.J. Blubaugh, M. Atamian, G.T. Babcock, J.H. Golbeck, and G.M. Cheniae Photoinhibition of hydoxylamine-extracted photosystem II membranes identification of the sites of photodamage Biochemistry 30 1991 7586 7597
6. P.J. Booth, B. Crystall, L.B. Giorgi, J. Barber, D.R. Klug, and G. Porter Thermodynamic properties of D1/D2/cytochrome b-559 reaction centres investigated by time-resolved fluorescence measurements Biochim. Biophys. Acta 1016 1990 141 152
7. J. Breton The emission of chlorophyll in vivo. Antenna fluorescence or ultrafast luminescence from reaction centre pigments FEBS 159 1983 1 5
8. 2-evolving complex Biochim. Biophys. Acta 766 1984 403 415
9. + in photosystem II enriched membranes at low pH Biochemistry 36 1997 749 755
10. N.G. Bukhov, S. Govindachary, E.A. Egorova, D. Joly, and R. Carpentier N,N,N′,N′-tetramethyl-p-phenylenediamine initiates the appearance of a well-resolved I peak in the kinetics of chlorophyll fluorescence rise in isolated thylakoids Biochim. Biophys. Acta 1607 2003 91 96
11. 559 in oxygen evolving photosystem II Biochemistry 31 1992 11449 11459
12. W.A. Cramer, G.S. Tae, P.N. Furbacher, and M. Böttger The enigmatic cytochrome b-559 of oxygenic photosynthesis Physiol. Plant 88 1993 705 711
13. H. Dau Molecular mechanism and quantitative models of variable photosystem II fluorescence Photochem. Photobiol. 60 1994 1 23
14. H. Dau, J.C. Andrews, T.A. Roelofs, M.J. Latimer, W. Liang, V.K. Yachandra, K. Sauer, and MP. Klein Structural consequences of ammonia binding to the manganese centre of the photosynthetic oxygen evolving complex an X-ray absorption spectroscopy study of isotropic and oriented photosystem II particles Biochemistry 34 1995 5274 5287
15. Duysens, L.N.M., Sweers, H.E., 1963. Mechanism of two photochemical reactions in algae as studied by means of fluorescence. In: Japanese Society of Plant Physiologists (Ed.), Studies on Microalgae and Photosynthetic Bacteria. University of Tokyo Press, Tokyo, pp. 353-372.
16. P.G. Falkowski, Y. Fujita, A. Ley, and D. Muzerall Evidence for cyclic electron flow around photosystem II in Chlorella pyrenoidosa Plant Physiol. 81 1986 310 312
17. D.A. Fell Metabolic control analysis a survey of its theoretical and experimental development Biochem. J. 286 1992 313 330
18. L.E. Fridlyand, J.E. Backhausen, and R. Scheibe Flux control of the malate valve in leaf cells Arch. Biochem. Biophys. 349 1998 290 298
19. C. Giersch Mathematical modelling of metabolism Curr. Opin. Plant Biol. 3 2000 249 253
20. Govindjee Sixty-three years since Kautsky chlorophyll a fluorescence Aust. J. Plant Physiol. 22 1995 131 160
21. M. Havaux Probing electron transport through and around photosystem II in vivo by the combined use of photoacoustic spectroscopy and chlorophyll fluorometry Isr. J. Chem. 38 1998 247 256
22. J. Haveman, and P. Mathis Flash-induced absorption changes of the primary donor of photosystem II at 820 nm in chloroplasts inhibited by low pH or tris-treatment Biochim. Biophys. Acta 440 1976 346 355
23. 2-fixing spinach chloroplasts and in developing pea chloroplasts Biochim. Biophys. Acta 423 1976 275 292
24. U. Heber, M.R. Kirk, and N.K. Boardman Photoreactions of cytochrome b-559 and cyclic electron flow in photosystem II of intact chloroplasts Biochim. Biophys. Acta 546 1979 292 306
25. P. Heredia, and J. De Las Rivas Fluorescence induction of Photosystem II membranes shows the steps till reduction and protonation of the quinone pool J. Plant Physiol. 160 2003 1499 1506
26. -559 in leaves and chloroplasts at room temperature Biochim. Biophys. Acta 245 1971 439 452
27. B.-D. Hsu, and J.-Y. Lee Fluorescence quenching by plastoquinone in an oxygen evolving photosystem-II-enriched preparation J. Photochem. Photobiol. B Biol 30 1995 57 61
28. B.-D. Hsu, and K.-L. Leu A possible origin of the middle phase of polyphasic chlorophyll fluorescence transient Funct. Plant Biol. 30 2003 571 576
29. M. Kitajama, and W.L. Butler Quenching of chlorophyll fluorescence and primary photochemistry in chloroplasts by dibromothymoquinone Biochim. Biophys. Acta 376 1975 105 115
30. M. Koblížek, D. Kaftan, and L. Nedbal On the relationship between the non-photochemical quenching of the chlorophyll fluorescence and the photosystem II light harvesting efficiency. A repetitive flash fluorescence induction study Photosynth. Res. 68 2001 141 152
31. D.M. Kramer, G. DiMarco, and F. Loreto Contribution of plastoquinone quenching to saturation pulse-induced rise of chlorophyll fluorescence in leaves P. Mathis Photosynthesis From Light to Biosphere vol. I 1995 Kluwer Academic Publishers Dordrecht 147 150
32. G.H. Krause, and E. Weis Chlorophyll fluorescence and photosynthesis the basis Annu. Rev. Plant Physiol. Plant Mol. Biol. 42 1991 313 349
33. 559 in the presence of plastoquinones J. Biol. Chem. 276 2001 86 91
34. J. Kurreck, R. Schödel, and G. Renger Investigation of the plastoquinone pool size and fluorescence quenching in thylakoid membranes and Photosystem II PS II. Membrane fragments Photosynth. Res. 63 2000 171 182
35. J. Lavergne, and H.-W. Trissl Theory of fluorescence induction of photosystem II derivation of analytical expressions in a model including exciton-radical-pair equilibrium and restricted energy transfer between photosynthetic units Biophys. J. 68 1995 2474 2492
36. D. Lazár Chlorophyll a fluorescence induction Biochim. Biophys. Acta 1412 1999 1 28
37. D. Lazár Chlorophyll a fluorescence rise induced by high light illumination of dark-adapted plant tissue studied by means of a model of photosystem II and considering photosystem II heterogeneity J. Theor. Biol. 220 2003 469 503
38. D. Lazár, and P. Pospíšil Mathematical simulation of chlorophyll a fluorescence rise measured with 3-3′,4′- dichlorophenyl.-1,1-dimethylurea-treated barley leaves at room and high temperatures Eur. Biophys. J. 28 1999 468 477
39. D. Lazár, J. Nauš, M. Matoušková, and M. Flašarová Mathematical modeling of changes in chlorophyll fluorescence induction caused by herbicides Pestic. Biochem. Physiol. 57 1997 200 210
40. D. Lazár, M. Brokeš, J. Nauš, and L. Dvořák Mathematical modelling of 3-3′,4′- dichlorophenyl.-1,1-dimethylurea action in plant leaves J. Theor. Biol. 191 1998 79 86
41. W. Leibl, J. Breton, J. Deprez, and H.-W. Trissl Photoelectric study on the kinetics of trapping and charge stabilization in oriented PS II membranes Photosynth. Res. 22 1989 257 275
42. H.K. Lichtenthaler Chlorophylls and carotenoids. Pigments of photosynthesis biomembranes Meth. Enzymol. 148 1987 350 382
43. D in protection against photoinhibition during in vivo photoactivation of photosystem II Biochim. Biophys. Acta 1411 1999 180 191
44. S. McCauley, and A. Melis Quantitation of plastoquinone photoreduction in spinach chloroplasts Photosynth. Res. 8 1986 3 16
45. V.P. McNamara, and K. Gounaris General Photosystem II complex contain only the high redox potential from of cytochrome b-559 which is tabilised by the ligation of calcium Biochim. Biophys. Acta 1231 1995 289 296
46. P. Mendes GEPASI a software package for modelling the dynamics, steady states and control of biochemical and other systems Comput. Appl. Biosci. 9 1993 563 571
47. P. Mendes Biochemistry by numbers simulation of biochemical pathways with Gepasi 3 Trends Biochem. Sci. 22 1997 361 363
48. -2 of the water oxidase in isolated spinach thylakoids Biochemistry 32 1993 9379 9386
49. +. nanosecond reduction kinetics in single flashes as a function of pH Biochim. Biophys. Acta 974 1989 36 43
50. N. Mizusawa, M. Ebina, and T. Yamashita Restoration of the high potential form of cytochrome b-559 through the photoreactivation of Tris-inactivated oxygen-evolving centre Photosynth. Res. 45 1995 71 77
51. J.A. Morgan, and D. Rhodes Mathematical modelling of plant metabolic pathways Metab. Eng. 4 2002 80 89
52. L. Nedbal, G. Samson, and J. Whitmarsh Redox state of one-electron component controls the rate of photoinhibition of photosystem II Proc. Natl Acad. Sci. USA 89 1992 7929 7933
53. C. Neubauer, and U. Schreiber The polyphasic rice of chlorophyll fluorescence upon onset of strong continuous illumination I. Saturation characteristics and partial control by the photosystem II acceptor side Z. Naturforsch. 42c 1987 1246 1254
54. W. Oettmeier, and H.J. Soll Competition between plastoquinone and 3-3,4-dichlorophenyl.-1,1-dimethylurea at the acceptor side of photosystem II. Biochim Biophys. Acta 724 1983 287 297
55. J.M. Ortega, M. Hervás, and M. Losada Redox and acid-base characterization of cytochtome b-559 in photosystem II particles Eur. J. Biochem. 171 1988 449 455
56. Y.I. Park, W.S. Chow, and J.M. Anderson Light inactivation of functional photosystem II in leaves of peas grown in moderate light depends on photon exposure Planta 196 1995 401 411
57. Y.I. Park, J.M. Anderson, and W.S. Chow Photoinactivation of functional photosystem II and D1-protein synthesis in vivo are independent of the modulation of the photosynthetic apparatus by grown irradiance Planta 198 1996 300 309
58. Y.I. Park, W.S. Chow, and J.M. Anderson Antenna size dependency of photoinactivation of photosystem II in light-acclimated pea leaves Plant Physiol. 115 1997 151 157
59. M.G. Poolman, D.A. Fell, and S. Thomas Modelling photosynthesis and its control J. Exp. Bot. 51 2000 319 328
60. P. Pospíšil Mechanisms of non-photochemical chlorophyll fluorescence quenching in higher plants Photosynthetica 34 1997 343 355
61. P. Pospíšil, and H. Dau Chlorophyll fluorescence transients of Photosystem II membrane particles as a tool for studying photosynthetic oxygen evolution Photosynth. Res. 65 2000 41 52
62. P. Pospíšil, and H. Dau Valinomycin sensitivity proves that light-induced thylakoid volatges result in millisecond phase of chlorophyll fluorescence transients Biochim. Biophys. Acta 1554 2002 94 100
63. 559 protects photosystem II against photoinhibition Biochemistry 34 1995 10932 10938
64. O. Prasil, Z. Kolber, J.A. Berry, and P.G. Falkowski Cyclic electron flow around photosystem II in vivo Photosynth. Res. 48 1996 395 410
65. E. Rabinovich, and Govindjee Photosynthesis 1969 Interscience Publishers, Wiley New York
66. M.R. Razeghifard, C. Klughammer, and R.J. Pace Electron paramegnetic resonance kinetic studies of the S states in spinach thylakoids Biochemistry 36 1997 86 92
67. G. Renger, and C. Wolff The existence of a high photochemical turnover rate at the reaction centers of system II in Tris-washed chloroplasts Biochim. Biophys. Acta 423 1976 610 614
68. T.A. Roelofs, C.-H. Lee, and A.R. Holzwarth Global target analysis of picosecond chlorophyll fluorescence kinetics from pea chloroplasts. A new approach to the characterization of the primary processes in photosystem II α- and β-units Biophys. J. 61 1992 1147 1163
69. + and reduced cytochrome b-559 in quinone-reconstituted PSII reaction centre Biochim. Biophys. Acta 1016 1990 121 126
70. G. Schansker, A. Srivastava, Govindjee, and R.J. Strasser Characterization of the 820-nm transmission signal paralleling the chlorophyll a fluorescence rise, OJIP in pea leaves Funct. Plant Biol. 30 2003 785 796
71. G.H. Schatz, H. Brock, and A.R. Holzwarth Kinetic and energetic model for the primary processes in photosystem II Biophys. J. 54 1988 397 405
72. U. Schreiber, and A. Krieger Two fundamentally different types of variable chlorophyll fluorescence in vivo FEBS Lett. 397 1996 131 135
73. U. Schreiber, C. Neubauer, and C. Klughammer Devices and methods for room-temperature fluorescence analysis Philos. Trans. R. Soc. Lond. B 323 1989 241 251
74. Y. Shigematsu, F. Satoh, and Y. Yamada A binding model for phenylurea herbicides based on analysis of a Thr 264 mutation in D-1 protein of tobacco Pestic. Biochem. Physiol. 35 1989 33 41
75. K. Shinohara, T.-A. Ono, and Y. Inoue Biochemical changes on photoactivation of oxygen-evolving enzyme in dark-grown pine cotyledons A. Murata Research in Photosynthesis vol. II 1992 Kluwer Academic Publishers Dordrecht 401 404
76. V.A. Shuvalov Composition and function of cytochrome b559 in reaction centers of photosystem II of green plants J. Bioenerg. Biomembr. 26 1994 619 626
77. J. Sinclair, Y.I. Park, W.S. Chow, and J.M. Anderson Target theory and the photoinactivation of photosystem II Photosynth. Res. 50 1996 33 40
78. 559 of photosystem II Biochim. Biophys. Acta 1367 1998 63 87
79. A. Stirbet, Govindjee, B.J. Strasser, and R.J. Strasser Chlorophyll a fluorescence induction in higher plants modelling and numerical simulation J. Theor. Biol. 193 1998 131 151
80. R.J. Strasser, A. Srivastava, and Govindjee Polyphasic chlorophyll a fluorescence transient in plants and cyanobacteria Photochem. Photobiol. 61 1995 32 42
81. A Biochim. Biophys. Acta 1015 1990 269 278
82. L.K. Thompson, and G.W. Brudvig Cytochrome b-559 may function to protect photosystem II from photoinhibitin Biochemistry 27 1988 6653 6658
83. 559 in photosystem II Biochemistry 28 1989 8048 8056
84. P. Tomek, D. Lazár, P. Ilík, and J. Nauš On the intermediate steps between the O and P steps in chlorophyll a fluorescence rise measured at different intensities of exciting light Aust. J. Plant Physiol. 28 2001 1151 1160
85. A. Trebst The three-dimensional structure of the herbicide binding niche on the reaction centre polypeptides of photosystem II Z. Naturforsch. 42c 1987 742 750
86. B binding polypeptide in the thylakoid membrane Photosynth. Res. 10 1986 381 392
87. H.-W. Trissl, and J. Lavergne Fluorescence induction from photosystem II analytical equations for the yields of photochemistry and fluorescence derived from analysis of a model including exciton-radical pair equilibrium and restricted energy transfer between photosynthetic units Aust. J. Plant Physiol. 22 1995 183 193
88. H.-W. Trissl, Y. Gao, and K. Wulf Theoretical fluorescence induction curves derived from coupled differential equations describing the primary photochemistry of photosystem II by an exciton-radical pair equilibrium Biophys. J. 64 1993 974 988
89. F. van der Bolt, and W. Vermaas Photoinactivation of photosystem II as studied with site-directed D2 mutants of cyanobacterium Synechocystis SP PCC-6803 Biochim. Biophys. Acta 1098 1992 247 254
90. R. van Grondelle Excitation energy transfer, trapping and annihilation in photosynthetic systems Biochim. Biophys. Acta 811 1985 147 195
91. F. van Mieghem, K. Brettel, B. Hillmann, A. Kamlowski, A.W. Rutherford, and E. Schlodder Charge recombination reactions in photosystem II. 1. Yields, recombination pathways, and kinetics of the primary pair Biochemistry 34 1995 4798 4813
92. A species promote chlorophyll triplet formation Proc. Natl Acad. Sci. USA 89 1992 1408 1412
93. D.V. Vavilin, E. Tyystjärvi, and E.-M. Aro Model for the fluorescence induction curve of photoinhibited thylakoids Biophys. J. 75 1998 503 512
94. C. Vernotte, A.-L. Etienne, and L.-M. Briantais Quenching of the system II chlorophyll fluorescence by the plastoquinone pool Biochim. Biophys. Acta 545 1979 519 527
95. D. Visser, and J. Heijnen The mathematics of metabolic control analysis revisited Metab. Eng. 4 2002 114 123
96. W.J. Vredenberg, and A. Bulychev Photoelectric effects on chlorophyll fluorescence of photosystem II in vivo. Kinetics in the absence and presence of valinomycin Bioelectrochemistry 60 2003 87 95
97. J. Whitmarsh, and H.B. Pakrasi Form and function of cytochrome b-559 D.R. Ort C.F. Yocum Oxygenic Photosynthesis The Light Reactions 1996 Kluwer Academic Publishers Dordrecht 249 264
98. J. Whitmarsh, G. Samson, and M. Poulson Photoprotection in photosystem II - the role of cytochrome b559 N. Baker J. Bower Photoinhibition of Photosynthesis - From Molecular Mechanisms to the Field 1994 BIOS Scientific Publishers Oxford 75 93