Cloning and characterization of resistance gene-like sequences in warm season turfgrass species

Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS'04

Volumn , Issue , 2004, Pages 225-230

  Budak, H ^a   Shearman, R C ^a   Dweikat, I ^a  

^a UNIVERSITY OF NEBRASKA LINCOLN   (United States)

Author keywords

C4 grasses; Evolution; Resistance genes

Indexed keywords

AMINO ACIDS; CLONING; DATA MINING; DATABASE SYSTEMS; HYDROPHOBICITY; NUCLEIC ACID SEQUENCES; PLANTS (BOTANY); PROTEINS;

C4 GRASSES; EVOLUTION; R GENE LIKE (RGL) SEQUENCES; RESISTANCE GENES;

GENES;

EID: 11144249359     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (17)

1. Hammond-Kosack K and Jones J. 1997. Plant disease resistance genes. In Annual Review of Plant Physiology and Plant Molecular Biology 48: 575-608.
2. Richter TE, and Ronald PC. (2000). The evolution of disease resistance genes. Plant Mol Biol 42: 195-204.
3. Baker B, Zambryski P, Staskawicz B, Dinesh-Kumar SP. 1997. Signaling in plant-microbe interactions. Science 276: 726-33.
4. Saraste M, Sibbald PR, Wittinghofer A. 1990. The P-loop - a common motif in ATP-and GTP- binding proteins. Trends Biochem Sci 15: 430-434.
5. Jones DA and Jones JDG. 1997. The role of leucine-rich repeat proteins in plant defences. Adv Bot Res 24: 89-167.
6. Kajava, AV. 1998. Structural diversity of leucine-rich repeat proteins. J. Mol. Biol. 277: 519-527.
7. Liu JJ and Ekramoddoullah AKM. 2003. Isolation, genetic variation and expression of TIR-NBS-LRR resistance gene analogs from western white pine (Pinus monticola Dougl. ex. D. Don.). Mol Gen Genomics 270:432-441.
8. Meyers BC, Dickerman AW, Michelmore RW, Sivaramakrishnan S, Sobral BW, and Young ND. 1999. Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily. Plant J 20: 317-32.
9. Pan Q, Liu YS, Budai-Hadrian O, Sela M, Carmel-Goren L, Zamir D, and Fluhr R. 2000. Comparative genetics of nucleotide binding site-leucine rich repeat resistance gene homologues in the genomes of two dicotyledons: tomato and arabidopsis. Genetics 155: 309-22.
10. Cannon SB, Zhu H, Baumgarten AM, Spangler R, May G, Cook DR, and Young ND. 2002. Diversity, distribution, and ancient taxonomic relationships within the TIR and non-TIR NBS-LRR resistance gene subfamilies. J Mol Evol 54: 548-62.
11. Yu YG, Bussand GR, Maroof MA. 1996. Isolation of a superfamily of candidate disease-resistance genes in soybean based on a conserved nucleotide-binding site. Proc Natl Acad Sci U S A. 93: 11751-11756.
12. Kanazin V, Marek LF, and Shoemaker RC. 1996. Resistance gene analogs are conserved and clustered in soybean. Proc Natl Acad Sci U SA 93: 11746-50.
13. Donald TM, Pellerone F, Adam-Blondon A-F, Boquet A, Thomas MR, Dry IB. 2002. Identification of reisitance gene analogs linked to a powdery mildew resistance locus in grapevine. Theor Appl Genet 104:610-618.
14. Budak H, Shearman RC, Parmaksiz I, Gaussoin RE, Riordan TP, Dweikat I. 2004. Molecular characterization of buffalograss germplasm using sequence related amplified polymorphism markers. Theor and Appl Genet 108:328-334.
15. Budak H, Shearman RC, Parmaksiz I, Dweikat I. 2004. Comparative analysis of seeded and vegetative biotype buffalograsses based on phylogenetic relationship using using ISSRs, SSRs, RAPDs, SRAPs. Theor and Appl Genet: 10.1007/s00122-004-1630-z.
16. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, and LipmanDJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-402.
17. Nei M and Gojobori T. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substituions. Mol Biol Evol 3:418:426.