Genomic variation of the fibropapilloma-associated marine turtle herpesvirus across seven geographic areas and three host species

Journal of Virology

Volumn 79, Issue 2, 2005, Pages 1125-1132

  Greenblatt, Rebecca J ^a,f   Quackenbush, Sandra L ^b   Casey, Rufina N ^a   Rovnak, Joel ^b   Balazs, George H ^c   Work, Thierry M ^d   Casey, James W ^a,e   Sutton, Claudia A ^a  

^a Department of Obstetrics Gynecology   (United States)

^b Department of Environmental and Radiological Health Sciences   (United States)

^c NATIONAL MARINE FISHERIES SERVICE   (United States)

^d Natl Wildl Hlth C Honolulu F S   (United States)

^e Animal Health Diagnostic Center   (United States)

^f SUNY UPSTATE MEDICAL UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG;

ARTICLE; ATLANTIC OCEAN; CARETTA CARETTA; CHELONIA MYDAS; FIBROPAPILLOMA ASSOCIATED TURTLE HERPESVIRUS; FIBROPAPILLOMATOSIS; GENETIC CONSERVATION; GENETIC VARIABILITY; GEOGRAPHICAL VARIATION (SPECIES); HERPES SIMPLEX VIRUS; HERPES VIRUS; HOST RANGE; LEPIDOCHELYS OLIVACEA; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PACIFIC OCEAN; PAPILLOMATOSIS; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; TURTLE; UL23 GENE; UL27 GENE; UL30 GENE; UL34 GENE; UL36 GENE; VIRUS GENE; VIRUS GENOME; VIRUS INFECTION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; FIBROMA; HERPESVIRIDAE; MOLECULAR SEQUENCE DATA; PAPILLOMA; PHYLOGENY; TURTLES; VARIATION (GENETICS);

EID: 11144225199     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.79.2.1125-1132.2005     Document Type: Article

References (41)

1. Avise, J. C., B. W. Bowen, T. Lamb, A. B. Melan, and E. Bermingham. 1992. Mitochondrial DNA evolution at a turtle's pace: evidence for low genetic variability and reduced microevolutionary rate in the testudines. Mol. Biol. Evol. 9:457-473.
2. Balazs, G. H., and S. G. Pooley (ed.). 1991. Research plan for marine turtle fibropapilloma. NOAA technical memo NMFS-SWFSC-156. U.S. Department of Commerce, Washington, D.C.
3. Bowen, B. W., F. A. Abreu-Grobois, G. H. Balazs, N. Kamezaki, C. J. Limpus, and R. J. Ferl. 1995. Trans-Pacific migrations of the loggerhead turtle (Caretta caretta) demonstrated with mitochondrial DNA markers. Proc. Natl. Acad. Sci. USA 92:3731-3734.
4. Bromham, L. 2002. Molecular clocks in reptiles: life history influences rate of molecular evolution. Mol. Biol. Evol. 19:302-309.
5. Coberley, S. S., R. C. Condit, L. H. Herbst, and P. A. Klein. 2002. Identification and expression of immunogenic proteins of a disease-associated marine turtle herpesvirus. J. Virol. 76:10553-10558.
6. Conceicao, M. B., J. A. Levy, F. L. Marins, and M. A. Marcovaldi. 1990. Electrophoretic characterization of a hybrid between Eretmochelys imbricata and Caretta caretta (Cheloniidae). Comp. Biochem. Physiol. 97B:275-278.
7. Curry, S. S., D. R. Brown, J. M. Gaskin, E. R. Jacobson, L. M. Ehrhart, S. Blahak, L. H. Herbst, and P. A. Klein. 2000. Persistent infectivity of a disease-associated herpesvirus in green turtles after exposure to seawater. J. Wildl. Dis. 36:792-797.
8. Franti, M., J. T. Aubin, L. Poirel, A. Gautheret-Dejean, D. Candotti, J. M. Huraux, and H. Agut. 1998. Definition and distribution analysis of glycoprotein B gene alleles of human herpesvirus 7. J. Virol. 72:8725-8730.
9. Gao, S. J., Y. J. Zhang, J. H. Deng, C. S. Rabkin, O. Flore, and H. B. Jenson. 1999. Molecular polymorphism of Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8) latent nuclear antigen: evidence for a large repertoire of viral genotypes and dual infection with different viral genotypes. J. Infect. Dis. 180:1466-1476.
10. Greenblatt, R. J., T. M. Work, G. H. Balazs, C. A. Sutton, R. N. Casey, and J. W. Casey. 2004. The Ozobranchus leech is a candidate mechanical vector for the fibropapilloma-associated turtle herpesvirus found latently infecting skin tumors on Hawaiian green turtles (Chelonia mydas). Virology 321:101-110.
11. Gupte, S. S., J. W. Olsen, and W. T. Ruyechan. 1991. The major herpes simplex virus type-1 DNA-binding protein is a zinc metalloprotein. J. Biol. Chem. 266:11413-11416.
12. Herbst, L. H. 1994. Fibropapillomatosis of marine turtles. Annu. Rev. Fish Dis. 4:389-425.
13. L40 genes in the genome of nononcogenic Marek's disease virus serotype 2. J. Gen. Virol. 80:2417-2422.
14. Jacobson, E. R., J. L. Mansell, J. P. Sundberg, L. Hajarr, M. E. Reichmann, L. M. Ehrhart, M. Walsh, and F. Murru. 1989. Cutaneous fibropapillomas of green turtles, Chelonia mydas. J. Comp. Pathol. 101:39-52.
15. Karl, S. A., B. W. Bowen, and J. C. Avise. 1995. Hybridization among the ancient mariners: characterization of marine turtle hybrids with molecular genetic assays. J. Hered. 86:262-268.
16. L29) genes of herpes simplex virus type 1. J. Vet. Med. Sci. 61:1161-1165.
17. Lackovich, J. K., D. R. Brown, B. L. Homer, R. L. Garber, D. R. Mader, R. H. Moretti, A. D. Patterson, L. H. Herbst, J. Oros, E. R. Jacobson, S. S. Curry, and P. A. Klein. 1999. Association of herpesvirus with fibropapillomatosis of the green turtle Chelonia mydas and the loggerhead turtle Caretta caretta in Florida. Dis. Aquat. Org. 37:889-897.
18. LaPierre, L. A., D. L. Holzschu, G. A. Wooster, P. R. Bowser, and J. W. Casey. 1998. Two closely related but distinct retroviruses are associated with walleye discrete epidermal hyperplasia. J. Virol. 72:3484-3490.
19. Limpus, C. J., and J. D. Miller. 1994. The occurrence of cutaneous fibropapillomas in marine turtles in Queensland. In Proceedings of the Australian Marine Turtle Conservation Workshop, 14 to 17 November 1990, p. 186-188. Queensland Department of Environment and Heritage and The Australian Nature Conservation Agency, Brisbane, Australia.
20. L26 gene. Proc. Natl. Acad. Sci. USA 89:2076-2080.
21. Lu, Y., Y. Wang, Q. Yu, A. Aguirre, G. Balazs, V. Nerurkar, and R. Yanagihara. 2000. Detection of herpesviral sequences in tissues of green turtles with fibropapilloma by polymerase chain reaction. Arch. Virol. 145:1885-1893.
22. Lucké, B. 1938. Studies on tumors in cold-blooded vertebrates. Annu. Rep. Tortugas Lab. Carnegie Inst. 1937-1938:92-94.
23. McDonald, D., and P. Dutton. 1990. Fibropapillomas on sea turtles in San Diego Bay, California. Mar. Turtle Newslett. 51:9-10.
24. McGeoch, D. J., S. Cook, A. Dolan, F. E. Jamieson, and E. A. Telford. 1995. Molecular phylogeny and evolutionary timescale for the family of mammalian herpesviruses. J. Mol. Biol. 247:443-458.
25. Midgley, R. S., A. I. Bell, D. J. McGeoch, and A. B. Rickinson. 2003. Latent gene sequencing reveals familial relationships among Chinese Epstein-Barr virus strains and evidence for positive selection of A11 epitope changes. J. Gen. Virol. 84:647-655.
26. Muir, W. B., R. Nichols, and J. Breuer. 2002. Phylogenetic analysis of Varicella-Zoster virus: evidence of intercontinental spread of genotypes and recombination. J. Virol. 76:1971-1979.
27. Nigro, O. D., Q. Yu, A. A. Aguirre, and Y. Lu. 2003. Sequencing and characterization of the full-length gene encoding the single-stranded DNA binding protein of a novel chelonian herpesvirus. Arch. Virol. 149:337-347.
28. Perelygina, L., L. Zhu, H. Zurkuhlen, R. Mills, M. Borodovsky, and J. Hilliard. 2003. Complete sequence and comparative analysis of the genome of herpes B virus (Cercopithecine Herpesvirus 1) from a rhesus monkey. J. Virol. 77:6167-6177.
29. Pignatelli, S., P. Dal Monte, G. Rossini, S. Chou, T. Gojobori, K. Hanada, J. J. Guo, W. Rawlison, W. Gritt, M. Mach, and M. P. Landini. 2003. Human cytomegalovirus glycoprotein N (gpUL73-gN) genomic variants: identification of a novel subgroup, geographical distribution and evidence of positive selective pressure. J. Virol. 77:11517-11530.
30. Quackenbush, S. L., T. M. Work, G. H. Balazs, R. N. Casey, J. Rovnak, A. Chaves, L. duToit, J. D. Baines, C. R. Parrish, P. R. Bowser, and J. W. Casey. 1998. Three closely related herpesviruses are associated with fibropapillomatosis in marine turtles. Virology 246:392-399.
31. Quackenbush, S. L., R. N. Casey, R. J. Murcek, T. A. Paul, T. M. Work, C. J. Limpus, A. Chaves, L. duToit, J. Vasconcelos Perez, A. Alonso Aguirre, T. R. Spraker, J. A. Horrocks, L. A. Vermeer, G. H. Balazs, and J. W. Casey. 2001. Quantitative analysis of herpesvirus sequences from normal tissue and fibropapillomas of marine turtles with real time PCR. Virology 287:105-111.
32. Roizman, B., and D. M. Knipe. 2001. Herpes simplex viruses and their replication, p. 2399-2460. In D. M. Knipe and P. M. Howley (ed.), Fields virology, 4th ed. Lippincott-Raven Publishers, Philadelphia, Pa.
33. Roizman, B., and P. E. Pellet. 2001. The family Herpesviridae: a brief introduction, p. 2381-2397. In D. M. Knipe and P. M. Howley (ed.), Fields virology, 4th ed. Lippincott-Raven Publishers, Philadelphia, Pa.
34. Smith, G. M., and C. W. Coates. 1938. Fibro-epithelial growths of the skin in large marine turtles, Chelonia mydas (Linneaus). Zoologica (N.Y.) 23:93-98.
35. Sui, D., P. Wu, H. J. Kung, and L. F. Lee. 1995. Identification and characterization of a Marek's disease virus gene encoding DNA polymerase. Virus Res. 36:269-278.
36. Whitley, R. J. 2001. Herpes simplex viruses, p. 2461-2509. In D. M. Knipe and P. M. Howley (ed.), Fields virology, 4th ed. Lippincott-Raven Publishers, Philadelphia, Pa.
37. Wood, J. R., F. E. Wood, and K. Critchley. 1983. Hybridization of Chelonia mydas and Eretmochelys imbricata. Copeia 1983:839-842.
38. Work, T. M., G. H. Balazs, R. A. Rameyer, and R. M. Morris. 2004. Retrospective pathology survey of green turtles (Chelonia mydas) with fibropapillomatosis in the Hawaiian Islands, 1993-2003. Dis. Aquat. Org. 62:163-176.
39. Yu, Q., N. Hu, Y. Lu, V. R. Nerurkar, and R. Yanagihara. 2001. Rapid acquisition of entire DNA polymerase gene of a novel herpesvirus from green turtle fibropapilloma by a genomic walking technique. J. Virol. Methods 91:183-195.
40. Zong, J., C. Metroka, M. Reitz, J. Nicholas, and G. Hayward. 1997. Strain variability among Kaposi sarcoma-associated herpesvirus (human herpesvirus 8) genomes: evidence that a large cohort of United States AIDS patients may have been infected by a single common isolate. J. Virol. 71:2505-2511.
41. Zong, J., D. Ciufo, R. Viscidi, L. Alagiozoglou, S. Tyring, P. Rady, J. Orenstein, W. Boto, H. Kalumbuja, N. Romano, M. Melbye, G. Kang, C. Boshoff, and G. Hayward. 2002. Genotypic analysis at multiple loci across Kaposi's sarcoma herpesvirus (KSHV) DNA molecules: clustering patterns, novel variants and chimerism. J. Clin. Virol. 23:119-148.