Genomic analysis of mutants affecting xanthophyll biosynthesis and regulation of photosynthetic light harvesting in Chlamydomonas reinhardtii

Photosynthesis Research

Volumn 82, Issue 3, 2004, Pages 265-276

  Anwaruzzaman, M ^a   Chin, Brian L ^a   Li, Xiao Ping ^a   Lohr, Martin ^b   Martinez, Diego A ^c   Niyogi, Krishna K ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b JOHANNES GUTENBERG UNIVERSITY   (Germany)

^c DOE JOINT GENOME INSTITUTE   (United States)

Author keywords

lutein; lycopene cyclase; non photochemical quenching; PsbS; violaxanthin de epoxidase; xanthophyll cycle; zeaxanthin

Indexed keywords

ALGAE; CHLAMYDOMONAS; CHLAMYDOMONAS REINHARDTII; CHLOROPHYTA; EUKARYOTA;

EID: 10944260280     PISSN: 01668595     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11120-004-2439-y     Document Type: Review

References (57)

1. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W and Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402
2. Asada K (1994) Mechanisms for scavenging reactive molecules generated in chloroplasts under light stress. In: Baker NR and Bowyer JR (eds) Photoinhibition of Photosynthesis: from Molecular Mechanisms to the Field, pp 129-142. BIOS Scientific Publishers, Oxford
3. 2 adapted cells of Chlamydomonas reinhardtii. DNA Res 7: 305-307
4. Aspinall-O'Dea M, Wentworth M, Pascal A, Robert B, Ruban A and Horton P (2002) In vitro reconstitution of the activated zeaxanthin state associated with energy dissipation in plants. Proc Natl Acad Sci USA 99: 16331-16335
5. Baroli I, Do AD, Yamane T and Niyogi KK (2003) Zeaxanthin accumulation in the absence of a functional xanthophyll cycle protects Chlamydomonas reinhardtii from photo-oxidative stress. Plant Cell 15: 992-1008
6. Bilger W and Björkman O (1990) Role of the xanthophyll cycle in photoprotection elucidated by measurements of light-induced absorbance changes, fluorescence and photosynthesis in leaves of Hedera canariensis. Photosynth Res 25: 173-185
7. Bugos RC and Yamamoto HY (1996) Molecular cloning of violaxanthin de-epoxidase from romaine lettuce and expression in Escherichia coli. Proc Natl Acad Sci USA 93: 6320-6325
8. Bugos RC, Hieber AD and Yamamoto HY (1998) Xanthophyll cycle enzymes are members of the lipocalin family, the first identified from plants. J Biol Chem 273: 15321-15324
9. Chunaev AS, Mirnaya ON, Maslov VG and Boschetti A (1991) Chlorophyll b- and loroxanthin-deficient mutants of Chlamydomonas reinhardtii. Photosynthetica 25: 291-301
10. Cunningham Jr FX, Pogson B, Sun Z, McDonald KA, DellaPenna D and Gantt E (1996) Functional analysis of the β and ε lycopene cyclase enzymes of Arabidopsis reveals a mechanism for control of cyclic carotenoid formation. Plant Cell 8: 1613-1626
11. Davies JP, Yildiz FH and Grossman A (1996) Sac1, a putative regulator that is critical for survival of Chlamydomonas reinhardtii during sulfur deprivation. EMBO J 15: 2150-2159
12. Demmig-Adams B (1990) Carotenoids and photoprotection in plants: a role for the xanthophyll zeaxanthin. Biochim Biophys Acta 1020: 1-24
13. Demmig-Adams B, Adams WW, III, Heber U, Neimanis S, Winter K, Krüger A, Czygan F-C, Bilger W and Björkman O (1990) Inhibition of zeaxanthin formation and of rapid changes in radiationless energy dissipation by dithiothreitol in spinach leaves and chloroplasts. Plant Physiol 92: 293-301
14. Dominici P, Caffarri S, Armenante F, Ceoldo S, Crimi M and Bassi R (2002) Biochemical properties of the PsbS subunit of Photosystem II either purified from chloroplast or recombinant. J Biol Chem 277: 22750-22758
15. Eichenberger W, Boschetti A and Michel HP (1986) Lipid and pigment composition of a chlorophyll b-deficient mutant of Chlamydomonas reinhardtii. Physiol Plant 66: 589-594
16. Elrad D, Niyogi KK and Grossman AR (2002) A major light-harvesting polypeptide of Photosystem II functions in thermal dissipation. Plant Cell 14: 1801-1816
17. Funk C, Schröder WP, Napiwotzki A, Tjus SE, Renger G and Andersson B (1995) The PSII-S protein of higher plants: a new type of pigment-binding protein. Biochemistry 34: 11133-11141
18. Gilmore AM (1997) Mechanistic aspects of xanthophyll cycle-dependent photoprotection in higher plant chloroplasts and leaves. Physiol Plant 99: 197-209
19. Gilmore AM and Yamamoto HY (1991) Zeaxanthin formation and energy-dependent fluorescence quenching in pea chloroplasts under artificially mediated linear and cyclic electron transport. Plant Physiol 96: 635-643
20. Gross CH, Ranum LPW and Lefebvre PA (1988) Extensive restriction fragment length polymorphisms in a new isolate of Chlamydomonas reinhardtii. Curr Genet 13: 503-508
21. Harris EH (1989) The Chlamydomonas Sourcebook. Academic Press, San Diego, California
22. Holt NE, Fleming GR and Niyogi KK (2004) Toward an understanding of the mechanism of nonphotochemical quenching in green plants. Biochemistry 43: 8281-8289
23. Holub O, Seufferheld MJ, Gohlke C, Govindjee and Clegg RM (2000) Fluorescence lifetime imaging (FLI) in real-time: a new technique in photosynthesis research. Photosynthetica 38: 581-599
24. Horton P and Hague A (1988) Studies on the induction of chlorophyll fluorescence in isolated barley protoplasts. IV. Resolution of non-photochemical quenching. Biochim Biophys Acta 932: 107-115
25. Horton P, Ruban AV and Walters RG (1996) Regulation of light harvesting in green plants. Annu Rev Plant Physiol Plant Mol Biol 47: 655-684
26. Kanazawa A and Kramer DM (2002) In vivo modulation of nonphotochemical exciton quenching (NPQ) by regulation of the chloroplast ATP synthase. Proc Natl Acad Sci USA 99: 12789-12794
27. Kathir P, LaVoie M, Brazelton WJ, Haas NA, Lefebvre PA and Silflow CD (2003) Molecular map of the Chlamydomonas reinhardtii nuclear genome. Eukaryot Cell 2: 362-379
28. Kim S, Sandusky P, Bowlby NR, Aebersold R, Green BR, Vlahakis S, Yocum CF and Pichersky E (1992) Characterization of a spinach psbS cDNA encoding the 22 kDa protein of Photosystem II. FEBS Lett 314: 67-71
29. Kim S, Pichersky E and Yocum CF (1994) Topological studies of spinach 22 kDa protein of Photosystem II. Biochim Biophys Acta 1188: 339-348
30. Li JB, Lin S, Jia H, Wu H, Roe BA, Kulp D, Stormo GD and Dutcher SK (2003) Analysis of Chlamydomonas reinhardtii genome structure using large-scale sequencing of regions on linkage groups I and III. J Eukaryot Microbiol 50: 145-155
31. Li X-P, Björkman O, Shih C, Grossman AR, Rosenquist M, Jansson S and Niyogi KK (2000) A pigment-binding protein essential for regulation of photosynthetic light harvesting. Nature 403: 391-395
32. Li X-P, Gilmore AM and Niyogi KK (2002a) Molecular and global time-resolved analysis of a psbS gene dosage effect on pH- and xanthophyll cycle-dependent nonphotochemical quenching in Photosystem II. J Biol Chem 277: 33590-33597
33. Li X-P, Phippard A, Pasari J and Niyogi KK (2002b) Structure-function analysis of Photosystem II subunit S (PsbS) in vivo. Funct Plant Biol 29: 1131-1139
34. Li X-P, Gilmore AM, Caffarri S, Bassi R, Golan T, Kramer D and Niyogi KK (2004) Regulation of photosynthetic light harvesting involves intrathylakoid lumen pH sensing by the PsbS protein. J Biol Chem 279: 22866-22874
35. Lokstein H, Tian L, Polle JEW and DellaPenna D (2002) Xanthophyll biosynthetic mutants of Arabidopsis thaliana: altered nonphotochemical quenching of chlorophyll fluorescence is due to changes in Photosystem II antenna size and stability. Biochim Biophys Acta 1553: 309-319
36. Ma Y-Z, Holt NE, Li X-P, Niyogi KK and Fleming GR (2003) Evidence for direct carotenoid involvement in the regulation of photosynthetic light harvesting. Proc Natl Acad Sci USA 100: 4377-4382
37. Michelmore RW, Paran I and Kesseli RV (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci USA 88: 9828-9832
38. Müller P, Li X-P and Niyogi KK (2001) Non-photochemical quenching. A response to excess light energy. Plant Physiol 125: 1558-1566
39. Müller-Moulé P, Conklin PL and Niyogi KK (2002) Ascorbate deficiency can limit violaxanthin de-epoxidase activity in vivo. Plant Physiol 128: 970-977
40. Munekage Y, Hojo M, Meurer J, Endo T, Tasaka M and Shikanai T (2002) PGR5 is involved in cyclic electron flow around Photosystem I and is essential for photoprotection in Arabidopsis. Cell 110: 361-371
41. 6f mutation specifically affects thermal dissipation of absorbed light energy in Arabidopsis. Plant J 28: 351-359
42. Nield J, Funk C and Barber J (2000) Supermolecular structure of Photosystem II and location of the PsbS protein. Phil Trans R Soc Lond B Biol Sci 355: 1337-1344
43. Niyogi KK (1999) Photoprotection revisited: genetic and molecular approaches. Annu Rev Plant Physiol Plant Mol Biol 50: 333-359
44. Niyogi KK, Björkman O and Grossman AR (1997a) Chlamydomonas xanthophyll cycle mutants identified by video imaging of chlorophyll fluorescence quenching. Plant Cell 9: 1369-1380
45. Niyogi KK, Björkman O and Grossman AR (1997b) The roles of specific xanthophylls in photoprotection. Proc Natl Acad Sci USA 94: 14162-14167
46. Niyogi KK, Grossman AR and Björkman O (1998) Arabidopsis mutants define a central role for the xanthophyll cycle in the regulation of photosynthetic energy conversion. Plant Cell 10: 1121-1134
47. Niyogi KK, Shih C, Chow WS, Pogson BJ, DellaPenna D and Björkman O (2001) Photoprotection in a zeaxanthin- and lutein-deficient double mutant of Arabidopsis. Photosynth Res 67: 139-145
48. Peterson RB and Havir EA (2000) A nonphotochemical-quenching-deficient mutant of Arabidopsis thaliana possessing normal pigment composition and xanthophyll-cycle activity. Planta 210: 205-214
49. Pogson B, McDonald KA, Truong M, Britton G and DellaPenna D (1996) Arabidopsis carotenoid mutants demonstrate that lutein is not essential for photosynthesis in higher plants. Plant Cell 8: 1627-1639
50. Pogson BJ, Niyogi KK, Björkman O and DellaPenna D (1998) Altered xanthophyll compositions adversely affect chlorophyll accumulation and nonphotochemical quenching in Arabidopsis mutants. Proc Natl Acad Sci USA 95: 13324-13329
51. Pogson BJ and Rissler HM (2000) Genetic manipulation of carotenoid biosynthesis and photoprotection. Phil Trans R Soc Lond B Biol Sci 355: 1395-1403
52. Shikanai T, Munekage Y, Shimizu K, Endo T and Hashimoto T (1999) Identification and characterization of Arabidopsis mutants with reduced quenching of chlorophyll fluorescence. Plant Cell Physiol 40: 1134-1142
53. Shikanai T, Müller-Moulé P, Munekage Y, Niyogi KK and Pilon M (2003) PAA1, a P-type ATPase of Arabidopsis, functions in copper transport in chloroplasts. Plant Cell 15: 1333-1346
54. Shrager J, Hauser C, Chang C-W, Harris EH, Davies J, McDermott J, Tamse R, Zhang Z and Grossman AR (2003) Chlamydomonas reinhardtii genome project: a guide to the generation and use of cDNA information. Plant Physiol 131: 401-408
55. Vysotskaia VS, Curtis DE, Voinov AV, Kathir P, Silflow CD and Lefebvre PA (2001) Development and characterization of genome-wide single nucleotide polymorphism markers in the green alga Chlamydomonas reinhardtii. Plant Physiol 127: 386-389
56. Wedel N, Klein R, Ljungberg U, Andersson B and Herrmann RG (1992) The single-copy gene psbS codes for a phylogenetically intriguing 22 kDa polypeptide of Photosystem II. FEBS Lett 314: 61-66
57. Yamamoto HY, Nakayama TOM and Chichester CO (1962) Studies on the light and dark interconversions of leaf xanthophylls. Arch Biochem Biophys 97: 168-173