-
1
-
-
0034995375
-
Complex biology with no parameters
-
Bailey,J.E. (2001) Complex biology with no parameters. Nat. Biotechnol., 19, 503-504.
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 503-504
-
-
Bailey, J.E.1
-
3
-
-
0023714694
-
Stoichiometric network analysis
-
Clarke,B.L. (1988) Stoichiometric network analysis. Cell Biophys., 12, 237-253.
-
(1988)
Cell Biophys.
, vol.12
, pp. 237-253
-
-
Clarke, B.L.1
-
4
-
-
0037424661
-
Constraints-based models: Regulation of gene expression reduces the steady-state solution space
-
Covert,M. and Palsson,B.O. (2003) Constraints-based models: regulation of gene expression reduces the steady-state solution space. J. Theor. Biol., 221, 309-325.
-
(2003)
J. Theor. Biol.
, vol.221
, pp. 309-325
-
-
Covert, M.1
Palsson, B.O.2
-
5
-
-
0036500834
-
Reverse engineering of biological complexity
-
Csete,M.E. and Doyle,J.C. (2002) Reverse engineering of biological complexity. Science, 295, 1664-1669.
-
(2002)
Science
, vol.295
, pp. 1664-1669
-
-
Csete, M.E.1
Doyle, J.C.2
-
6
-
-
0034625143
-
The Escherichia coli MG1655 in silico metabolic genotype: Its definition, characteristics, and capabilities
-
Edwards,J.S. and Palsson,B.O. (2000) The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities. Proc. Natl Acad. Sci. USA, 97, 5528-5533.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 5528-5533
-
-
Edwards, J.S.1
Palsson, B.O.2
-
7
-
-
0031249909
-
Determination of minimal cut sets of a complex fault tree
-
Fard,N.S. (1997) Determination of minimal cut sets of a complex fault tree. Comput. Ind. Eng., 33, 59-62.
-
(1997)
Comput. Ind. Eng.
, vol.33
, pp. 59-62
-
-
Fard, N.S.1
-
8
-
-
0001364051
-
The existence and uniqueness of steady states for a class of chemical reaction networks
-
Feinberg,M. (1995) The existence and uniqueness of steady states for a class of chemical reaction networks. Arch. Rat. Mech. Anal., 132, 311-370.
-
(1995)
Arch. Rat. Mech. Anal.
, vol.132
, pp. 311-370
-
-
Feinberg, M.1
-
9
-
-
0033764169
-
The small world of metabolism
-
Fell,D.A. and Wagner,A. (2000) The small world of metabolism. Nat. Biotechnol., 18, 1121-1122.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 1121-1122
-
-
Fell, D.A.1
Wagner, A.2
-
10
-
-
0037313750
-
Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network
-
Förster,J., Famili,I., Fu,P., Palsson,B.O. and Nielsen,J. (2003) Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network. Genome Res., 13, 244-253.
-
(2003)
Genome Res.
, vol.13
, pp. 244-253
-
-
Förster, J.1
Famili, I.2
Fu, P.3
Palsson, B.O.4
Nielsen, J.5
-
11
-
-
0345504891
-
Crosstalk in plant cell signaling: Structure and function of the genetic network
-
Genoud,T. and Metraux,J.-P. (1999) Crosstalk in plant cell signaling: structure and function of the genetic network. Trends Plant Sci., 4, 503-507.
-
(1999)
Trends Plant Sci.
, vol.4
, pp. 503-507
-
-
Genoud, T.1
Metraux, J.-P.2
-
12
-
-
0037079023
-
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
-
Ibarra,R.U., Edwards,J.S. and Palsson,B.O. (2002) Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. Nature, 420, 186-189.
-
(2002)
Nature
, vol.420
, pp. 186-189
-
-
Ibarra, R.U.1
Edwards, J.S.2
Palsson, B.O.3
-
13
-
-
0036500993
-
Systems biology: A brief overview
-
Kitano,H. (2002) Systems biology: a brief overview. Science, 295, 1662-1664.
-
(2002)
Science
, vol.295
, pp. 1662-1664
-
-
Kitano, H.1
-
14
-
-
0037197159
-
Calculability analysis in underdetermined metabolic networks illustrated by a model of the central metabolism in purple nonsulfur bacteria
-
Klamt,S., Schuster,S. and Gilles,E.D. (2002a) Calculability analysis in underdetermined metabolic networks illustrated by a model of the central metabolism in purple nonsulfur bacteria. Biotechnol. Bioeng., 77, 734-751.
-
(2002)
Biotechnol. Bioeng.
, vol.77
, pp. 734-751
-
-
Klamt, S.1
Schuster, S.2
Gilles, E.D.3
-
15
-
-
0036039060
-
Combinatorial complexity of pathway analysis in metabolic networks
-
Klamt,S. and Stelling,J. (2002b) Combinatorial complexity of pathway analysis in metabolic networks. Mol. Biol. Rep., 29, 233-236.
-
(2002)
Mol. Biol. Rep.
, vol.29
, pp. 233-236
-
-
Klamt, S.1
Stelling, J.2
-
16
-
-
0037308505
-
Two approaches for metabolic pathway analysis?
-
Klamt,S. and Stelling,J. (2003a) Two approaches for metabolic pathway analysis? Trends Biotechnol., 21, 64-69.
-
(2003)
Trends Biotechnol.
, vol.21
, pp. 64-69
-
-
Klamt, S.1
Stelling, J.2
-
17
-
-
0037316342
-
FluxAnalyzer: Exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps
-
Klamt,S., Stelling,J., Ginkel,M. and Gilles,E.D. (2003b) FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps. Bioinformatics, 19, 261-269.
-
(2003)
Bioinformatics
, vol.19
, pp. 261-269
-
-
Klamt, S.1
Stelling, J.2
Ginkel, M.3
Gilles, E.D.4
-
18
-
-
0037316239
-
Reconstruction of metabolic networks from genome data and analysis of their global structure for various organisms
-
Ma,H. and Zeng,A. (2003a) Reconstruction of metabolic networks from genome data and analysis of their global structure for various organisms. Bioinformatics, 19, 270-277.
-
(2003)
Bioinformatics
, vol.19
, pp. 270-277
-
-
Ma, H.1
Zeng, A.2
-
19
-
-
0042093610
-
The connectivity structure, giant strong component and centrality in metabolic networks
-
Ma,H. and Zeng,A. (2003b) The connectivity structure, giant strong component and centrality in metabolic networks. Bioinformatics, 19, 1423-1430.
-
(2003)
Bioinformatics
, vol.19
, pp. 1423-1430
-
-
Ma, H.1
Zeng, A.2
-
20
-
-
0034020583
-
Global properties of the metabolic map of Escherichia coli
-
Ouzonis,A.C. and Karp,P.D. (2000) Global properties of the metabolic map of Escherichia coli. Genome Res., 10, 568-576.
-
(2000)
Genome Res.
, vol.10
, pp. 568-576
-
-
Ouzonis, A.C.1
Karp, P.D.2
-
21
-
-
0036350955
-
The genome scale metabolic extreme pathway structure in Haemophilus influenzae shows significant network redundancy
-
Papin,J.A., Price,N.D., Edwards,J.E. and Palsson,B.O. (2002) The genome scale metabolic extreme pathway structure in Haemophilus influenzae shows significant network redundancy. J. Theor. Biol., 215, 67-82.
-
(2002)
J. Theor. Biol.
, vol.215
, pp. 67-82
-
-
Papin, J.A.1
Price, N.D.2
Edwards, J.E.3
Palsson, B.O.4
-
22
-
-
0037385718
-
Genome-scale microbial in silico models: The constraints-based approach
-
Price,N.D., Papin,J.A., Schilling,C.H. and Palsson,B.O. (2003) Genome-scale microbial in silico models: the constraints-based approach. Trends Biotechnol., 21, 162-169.
-
(2003)
Trends Biotechnol.
, vol.21
, pp. 162-169
-
-
Price, N.D.1
Papin, J.A.2
Schilling, C.H.3
Palsson, B.O.4
-
23
-
-
0344052685
-
METATOOL: For studying metabolic networks
-
Pfeiffer,J., Sánchez-Valdenebro,I., Nuño,J.C., Montero,F. and Schuster,S. (1999) METATOOL: for studying metabolic networks. Bioinformatics, 15, 251-257.
-
(1999)
Bioinformatics
, vol.15
, pp. 251-257
-
-
Pfeiffer, J.1
Sánchez-Valdenebro, I.2
Nuño, J.C.3
Montero, F.4
Schuster, S.5
-
24
-
-
0034615791
-
Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective
-
Schilling,C.H., Letscher,D. and Palsson,B.O. (2000) Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective. J. Theor. Biol., 203, 229-248.
-
(2000)
J. Theor. Biol.
, vol.203
, pp. 229-248
-
-
Schilling, C.H.1
Letscher, D.2
Palsson, B.O.3
-
25
-
-
0034064689
-
A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks
-
Schuster,S., Fell,D. and Dandekar,T. (2000) A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks. Nat. Biotechnol., 18, 326-332.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 326-332
-
-
Schuster, S.1
Fell, D.2
Dandekar, T.3
-
26
-
-
0036691976
-
Reaction routes in biochemical reaction systems: Algebraic properties, validated calculation procedure and example from nucleotide metabolism
-
Schuster,S., Hilgetag,J.C., Woods,J.H. and Fell,D.A. (2002) Reaction routes in biochemical reaction systems: algebraic properties, validated calculation procedure and example from nucleotide metabolism. J. Math. Biol., 45, 153-181
-
(2002)
J. Math. Biol.
, vol.45
, pp. 153-181
-
-
Schuster, S.1
Hilgetag, J.C.2
Woods, J.H.3
Fell, D.A.4
-
28
-
-
0037079050
-
Metabolic network structure determines key aspects of functionality and regulation
-
Stelling,J., Klamt,S., Bettenbrock,K., Schuster,S. and Gilles,E.D. (2002) Metabolic network structure determines key aspects of functionality and regulation. Nature, 420, 190-193.
-
(2002)
Nature
, vol.420
, pp. 190-193
-
-
Stelling, J.1
Klamt, S.2
Bettenbrock, K.3
Schuster, S.4
Gilles, E.D.5
-
30
-
-
0015823097
-
Boolean formalization of genetic control circuits
-
Thomas,R. (1973) Boolean formalization of genetic control circuits. J. Theor. Biol., 42, 563-585.
-
(1973)
J. Theor. Biol.
, vol.42
, pp. 563-585
-
-
Thomas, R.1
-
31
-
-
0037075690
-
Modeling and simulation: Tools for metabolic engineering
-
Wiechert,W. (2002) Modeling and simulation: tools for metabolic engineering. J. Biotechnol., 94, 37-64.
-
(2002)
J. Biotechnol.
, vol.94
, pp. 37-64
-
-
Wiechert, W.1
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