Nucleotide sequence and polymorphism of the caprine major histocompatibility complex class II DQA1 (Cahi-DQA1) gene

Molecular Immunology

Volumn 42, Issue 3, 2005, Pages 375-379

  Amills, M ^a   Sulas, C ^a   Sanchez A ^a   Bertoni, G ^b   Zanoni, R ^b   Obexer Ruff, G ^c  

^a UNIVERSITAT AUTÒNOMA DE BARCELONA   (Spain)

^b Institute of Veterinary Anatomy   (Switzerland)

^c UNIVERSITY OF BERN   (Switzerland)

Author keywords

DQA; Goat; Major histocompatibility complex; Polymorphism

Indexed keywords

AMINO ACID DERIVATIVE; NORLEUCINE;

3' UNTRANSLATED REGION; AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ARTICLE; BINDING SITE; CAPRINE HISTOCOMPATIBILITY COMPLEX CLASS 2 DQA1 GENE; CONTROLLED STUDY; CORRELATION ANALYSIS; EXON; GENE; GENE AMPLIFICATION; GENE FREQUENCY; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC POLYMORPHISM; GOAT; IMMUNOGENETICS; INTRON; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN BINDING;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; GENES, MHC CLASS II; GOATS; HISTOCOMPATIBILITY ANTIGENS CLASS II; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMORPHISM, GENETIC; SEQUENCE ALIGNMENT;

BOVINAE; CAPRA; CAPRA HIRCUS; OVIS;

EID: 10344252267     PISSN: 01615890     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molimm.2004.07.009     Document Type: Article

References (11)

1. M. Amills, N. Jiménez, D. Villalba, M. Tor, E. Molina, D. Cubiló, C. Marcos, A. Francesch, A. Sànchez, and J. Estany Identification of three single nucleotide polymorphisms in the chicken insulin-like growth factor 1 and 2 genes and their associations with growth and feeding traits Poult. Sci. 82 2003 1485 1493
2. L. Andersson, and L. Rask Characterization of the MHC class II region in cattle. The number of DQ genes varies between haplotypes Immunogenetics 27 1988 110 120
3. F. Corpet Multiple sequence alignment with hierarchical clustering Nucl. Acids Res. 16 1988 10881 10890
4. E.J. Glass, R.A. Oliver, and G.C. Russell Duplicated DQ haplotypes increase the complexity of restriction element usage in cattle J. Immunol. 165 2000 134 138
5. M. Kimura A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences J. Mol. Evol. 16 1980 111 120
6. S. Kumar, K. Tamura, I.B. Jakobsen, and M. Nei MEGA2: molecular evolutionary genetics analysis software Bioinformatics 17 2001 1244 1245
7. P.A. Reche, and E.L. Reinherz Sequence variability analysis of human class I and class II MHC molecules: functional and structural correlates of amino acid polymorphisms J. Mol. Biol. 331 2003 623 641
8. G. Saruhan-Direskeneli, F.A. Uyar, F. Bas, H. Gunoz, R. Bundak, N. Saka, and F. Darendeliler HLA-DR and -DQ associations with insulin-dependent diabetes mellitus in a population of Turkey Hum. Immunol. 61 2000 296 302
9. S. Scholz, and E.D. Albert Immunogenetic aspects of juvenile chronic arthritis Clin. Exp. Rheumatol. Suppl. 9 1993 S37 S41
10. P.C. Scott, K.J. Gogolin-Ewens, T.E. Adams, and M.R. Brandon Nucleotide sequence, polymorphism, and evolution of ovine MHC class II DQA genes Immunogenetics 34 1991 69 79
11. H. Wright, and K.T. Ballingall Mapping and characterization of the DQ subregion of the ovine MHC Anim. Genet. 25 1994 243 249