-
1
-
-
0035775725
-
A new approach to decoding life: Systems biology
-
Ideker, T., Galitski, T. and Hood, L. A new approach to decoding life: systems biology. Annu. Rev. Genomics Hum. Genet., 2001, 2: p. 343-372.
-
(2001)
Annu. Rev. Genomics Hum. Genet.
, vol.2
, pp. 343-372
-
-
Ideker, T.1
Galitski, T.2
Hood, L.3
-
2
-
-
0036500993
-
Systems biology: A brief overview
-
Kitano, H. Systems biology: a brief overview. Science, 2002, 295(5560): p. 1662-1664.
-
(2002)
Science
, vol.295
, Issue.5560
, pp. 1662-1664
-
-
Kitano, H.1
-
3
-
-
3242701251
-
-
Weston, A.D., Baliga, N.S., Bonneau, R. and Hood, L. Systems approaches applied to the study of Saccharomyces cerevisiae and Halobacterium sp. Cold Spring Harb. Symp. Quant. Biol., 2003, 68: p. 345-357.
-
(2003)
Systems Approaches Applied to the Study of Saccharomyces Cerevisiae and Halobacterium Sp. Cold Spring Harb. Symp. Quant. Biol.
, vol.68
, pp. 345-357
-
-
Weston, A.D.1
Baliga, N.S.2
Bonneau, R.3
Hood, L.4
-
4
-
-
4644335402
-
Systems biology, proteomics, and the future of health care: Toward predictive, preventative, and personalized medicine
-
Weston, A.D. and Hood, L. Systems biology, proteomics, and the future of health care: toward predictive, preventative, and personalized medicine. J. Proteome Res., 2004, 3(2): p. 179-196.
-
(2004)
J. Proteome Res.
, vol.3
, Issue.2
, pp. 179-196
-
-
Weston, A.D.1
Hood, L.2
-
6
-
-
0037069421
-
Coordinate regulation of energy transduction modules in Halobacterium sp. analyzed by a global systems approach
-
Baliga, N.S., Pan, M., Goo, Y.A., Yi, E.C., Goodlett, D.R., Dimitrov, K., Shannon, P., Aebersold, R., Ng, W.V. and Hood, L. Coordinate regulation of energy transduction modules in Halobacterium sp. analyzed by a global systems approach. Proc. Natl. Acad. Sci. USA, 2002, 99(23): p. 14913-14918.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, Issue.23
, pp. 14913-14918
-
-
Baliga, N.S.1
Pan, M.2
Goo, Y.A.3
Yi, E.C.4
Goodlett, D.R.5
Dimitrov, K.6
Shannon, P.7
Aebersold, R.8
Ng, W.V.9
Hood, L.10
-
7
-
-
0036207347
-
Modeling and Simulation of Genetic Regulatory Systems: A Literatre Review
-
De Jong, H. Modeling and Simulation of Genetic Regulatory Systems: A Literatre Review. Journal of Computational Biology, 2002, 9(1): p. 67-103.
-
(2002)
Journal of Computational Biology
, vol.9
, Issue.1
, pp. 67-103
-
-
De Jong, H.1
-
8
-
-
1242328740
-
Reconstruction of microbial transcriptional regulatory networks
-
Herrgard, M.J., Covert, M.W. and Palsson, B.O. Reconstruction of microbial transcriptional regulatory networks. Curr. Opin. Biotechnol., 2004, 15(1): p. 70-77.
-
(2004)
Curr. Opin. Biotechnol.
, vol.15
, Issue.1
, pp. 70-77
-
-
Herrgard, M.J.1
Covert, M.W.2
Palsson, B.O.3
-
9
-
-
0035805255
-
Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
-
Ideker, T., Thorsson, V., Ranish, J.A., Christmas, R., Buhler, J., Eng, J.K., Bumgarner, R., Goodlett, D.R., Aebersold, R. and Hood, L. Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science, 2001, 292(5518): p. 929-934.
-
(2001)
Science
, vol.292
, Issue.5518
, pp. 929-934
-
-
Ideker, T.1
Thorsson, V.2
Ranish, J.A.3
Christmas, R.4
Buhler, J.5
Eng, J.K.6
Bumgarner, R.7
Goodlett, D.R.8
Aebersold, R.9
Hood, L.10
-
10
-
-
0031879114
-
Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells
-
Arkin, A., Ross, J. and Mcadams, H.H. Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells. Genetics, 1998, 149(4): p. 1633-1648.
-
(1998)
Genetics
, vol.149
, Issue.4
, pp. 1633-1648
-
-
Arkin, A.1
Ross, J.2
Mcadams, H.H.3
-
11
-
-
2942514591
-
Biochemical Network Stochastic Simulator (BioNetS): Software for stochastic modeling of biochemical networks
-
Adalsteinsson, D., Mcmillen, D. and Elston, T.C. Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks. BMC Bioinformatics, 2004, 5(1): p. 24.
-
(2004)
BMC Bioinformatics
, vol.5
, Issue.1
, pp. 24
-
-
Adalsteinsson, D.1
Mcmillen, D.2
Elston, T.C.3
-
12
-
-
10044229033
-
A method for estimating stochastic noise in large genetic regulatory networks
-
Orrell, D., Ramsey, S., De Atauri, P. and Bolouri, H. A method for estimating stochastic noise in large genetic regulatory networks. Bioinformatics, 2004.
-
(2004)
Bioinformatics
-
-
Orrell, D.1
Ramsey, S.2
De Atauri, P.3
Bolouri, H.4
-
14
-
-
0036020655
-
Genetic network modeling
-
Van Someren, E.P., Wessels, L.F., Backer, E. and Reinders, M.J. Genetic network modeling. Pharmacogenomics, 2002, 3 4): p. 507-525.
-
(2002)
Pharmacogenomics
, vol.3
, Issue.4
, pp. 507-525
-
-
Van Someren, E.P.1
Wessels, L.F.2
Backer, E.3
Reinders, M.J.4
-
15
-
-
0034564415
-
Linear modeling of genetic networks from experimental data
-
Van Someren, E.P., Wessels, L.F. and Reinders, M.J. Linear modeling of genetic networks from experimental data, Proc. Int. Conf. Intell. Syst. Mol. Biol., 2000, 8: p. 355-366.
-
(2000)
Proc. Int. Conf. Intell. Syst. Mol. Biol.
, vol.8
, pp. 355-366
-
-
Van Someren, E.P.1
Wessels, L.F.2
Reinders, M.J.3
-
16
-
-
0035237805
-
Rich probabilistic models for gene expression
-
Segal, E., Taskar, B., Gasch, A., Friedman, N. and Koller, D. Rich probabilistic models for gene expression. Bioinformatics, 2001, 17 Suppl 1: p. S243-252.
-
(2001)
Bioinformatics
, vol.17
, Issue.SUPPL. 1
-
-
Segal, E.1
Taskar, B.2
Gasch, A.3
Friedman, N.4
Koller, D.5
-
17
-
-
0037941585
-
Module networks: Identifying regulatory modules and their condition-specific regulatorsftom gene expression data
-
Segal, E., Shapira, M., Regev, A., Pe'er, D., Botstein, D., Koller, D. and Friedman, N. Module networks: identifying regulatory modules and their condition-specific regulatorsftom gene expression data. Nat. Genet., 2003, 34(2): p. 166-176.
-
(2003)
Nat. Genet.
, vol.34
, Issue.2
, pp. 166-176
-
-
Segal, E.1
Shapira, M.2
Regev, A.3
Pe'er, D.4
Botstein, D.5
Koller, D.6
Friedman, N.7
-
18
-
-
10744226222
-
Computational discovery of gene modules and regulatory networks
-
Bar-Joseph, Z., Gerber, G.K., Lee, T.I., Rinaldi, N.J., Yoo, J.Y., Robert, F., Gordon, D.B., Fraenkel, E., Jaakkola, T.S., Young, R.A. and Gifford, D.K. Computational discovery of gene modules and regulatory networks. Nat. Biolechnol., 2003, 21(11): p. 1337-1342.
-
(2003)
Nat. Biolechnol.
, vol.21
, Issue.11
, pp. 1337-1342
-
-
Bar-Joseph, Z.1
Gerber, G.K.2
Lee, T.I.3
Rinaldi, N.J.4
Yoo, J.Y.5
Robert, F.6
Gordon, D.B.7
Fraenkel, E.8
Jaakkola, T.S.9
Young, R.A.10
Gifford, D.K.11
-
19
-
-
0242490792
-
Limitations of quantitative gene regulation models: A case study
-
Kim, P.M. and Tidor, B. Limitations of quantitative gene regulation models: a case study. Genome Res., 2003, 13 11): p. 2391-2395.
-
(2003)
Genome Res.
, vol.13
, Issue.11
, pp. 2391-2395
-
-
Kim, P.M.1
Tidor, B.2
-
20
-
-
0033083733
-
It's a noisy business! Genetic regulation at the nanomolar scale
-
Mcadams, H.H. and Arkin, A. It's a noisy business! Genetic regulation at the nanomolar scale. Trends Genet., 1999, 15 2): p. 65-69.
-
(1999)
Trends Genet.
, vol.15
, Issue.2
, pp. 65-69
-
-
Mcadams, H.H.1
Arkin, A.2
-
21
-
-
0037078982
-
Control, exploitation and tolerance of intracellular noise
-
Rao, C.V., Wolf, D.M. and Arkin, A.P. Control, exploitation and tolerance of intracellular noise. Nature, 2002, 420(6912): p. 231-237.
-
(2002)
Nature
, vol.420
, Issue.6912
, pp. 231-237
-
-
Rao, C.V.1
Wolf, D.M.2
Arkin, A.P.3
-
22
-
-
2342648924
-
Integrating high-throughput and computational data elucidates bacterial networks
-
Covert, M.W., Knight, E.M., Reed, J.L., Herrgard, M.J. and Palsson, B.O. Integrating high-throughput and computational data elucidates bacterial networks. Nature, 2004, 429(6987 : p. 92-96.
-
(2004)
Nature
, vol.429
, Issue.6987
, pp. 92-96
-
-
Covert, M.W.1
Knight, E.M.2
Reed, J.L.3
Herrgard, M.J.4
Palsson, B.O.5
-
23
-
-
0242490780
-
Cytoscape: A software environment for integrated models of biomolecular interaction networks
-
Shannon, P., Markiel, A., Ozier, O., Baliga, N.S., Wang, J.T., Ramage, D., Amin, N., Schwikowski, B. and Ideker, T. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res., 2003, 13(11): p. 2498-2504.
-
(2003)
Genome Res.
, vol.13
, Issue.11
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
-
24
-
-
0034660322
-
Protein function in the post-genomic era
-
Eisenberg, D., Marcotte, E.M., Xenarios, I. and Yeates, T.O. Protein function in the post-genomic era Nature, 2000, 405 6788): p. 823-826.
-
(2000)
Nature
, vol.405
, Issue.6788
, pp. 823-826
-
-
Eisenberg, D.1
Marcotte, E.M.2
Xenarios, I.3
Yeates, T.O.4
-
25
-
-
0033618555
-
Detecting protein function and protein-protein interactions from genome sequences
-
Marcotte, E.M., Pellegrini, M., Ng, H.L., Rice, D.W., Yeates, T.O. and Eisenberg, D. Detecting protein function and protein-protein interactions from genome sequences. Science, 1999, 285 5428): p. 751-753.
-
(1999)
Science
, vol.285
, Issue.5428
, pp. 751-753
-
-
Marcotte, E.M.1
Pellegrini, M.2
Ng, H.L.3
Rice, D.W.4
Yeates, T.O.5
Eisenberg, D.6
-
26
-
-
0033055062
-
The use of gene clusters to infer functional coupling
-
Overbeek, R., Fonstein, M., D'souza, M., Pusch, G.D. and Maltsev, N. The use of gene clusters to infer functional coupling. Proc. Natl. Acad. Sci. USA, 1999, 96(6): p. 2896-2901.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, Issue.6
, pp. 2896-2901
-
-
Overbeek, R.1
Fonstein, M.2
D'souza, M.3
Pusch, G.D.4
Maltsev, N.5
-
27
-
-
0001291140
-
A powerful nonhomology method for the prediction of operons in prokaryotes
-
Moreno-Hagelsieb, G. and Collado-Vides, J. A powerful nonhomology method for the prediction of operons in prokaryotes. Bioinformatics, 2002, 18 Suppl 1: p. S329-336.
-
(2002)
Bioinformatics
, vol.18
, Issue.SUPPL. 1
-
-
Moreno-Hagelsieb, G.1
Collado-Vides, J.2
-
28
-
-
0033551248
-
Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles
-
Pellegrini, M., Marcotte, E.M., Thompson, M.J., Eisenberg, D. and Yeates, T.O. Assigning protein functions by comparative genome analysis: protein phylogenetic profiles. Proc. Natl. Acad. Sci. USA, 1999, 96(8): p. 4285-4288.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, Issue.8
, pp. 4285-4288
-
-
Pellegrini, M.1
Marcotte, E.M.2
Thompson, M.J.3
Eisenberg, D.4
Yeates, T.O.5
-
29
-
-
0041845736
-
Predicting functional linkages from gene fusions with confidence Applied
-
Verjovsky Marcotte, C.J. and Marcotte, E.M. Predicting functional linkages from gene fusions with confidence. Applied Bioinformatics, 2002, 1: p. 37-44.
-
(2002)
Bioinformatics
, Issue.1
, pp. 37-44
-
-
Verjovsky Marcotte, C.J.1
Marcotte, E.M.2
-
30
-
-
4644231028
-
Prolinks: A database of protein functional linkages derived from coevolution
-
Bowers, P.M., Pellegrini, M., Thompson, M.J., Fierro, J., Yeates, T.O. and Eisenberg, D. Prolinks: a database of protein functional linkages derived from coevolution. Genome Biol., 2004, 5(5): p. R35.
-
(2004)
Genome Biol.
, vol.5
, Issue.5
-
-
Bowers, P.M.1
Pellegrini, M.2
Thompson, M.J.3
Fierro, J.4
Yeates, T.O.5
Eisenberg, D.6
-
31
-
-
0242299155
-
CAFASP3: The third critical assessment of fully automated structure prediction methods
-
Fischer, D., Rychlewski, L., Dunbrack, R.L. Jr., Ortiz, A.R. and Elofsson, A. CAFASP3: the third critical assessment of fully automated structure prediction methods. Proteins, 2003, 53 Suppl 6: p. 503-516.
-
(2003)
Proteins
, vol.53
, Issue.SUPPL. 6
, pp. 503-516
-
-
Fischer, D.1
Rychlewski, L.2
Dunbrack Jr., R.L.3
Ortiz, A.R.4
Elofsson, A.5
-
32
-
-
0034780030
-
Pcons: A neural-network-based consensus predictor that improves fold recognition
-
Lundstrom, J., Rychlewski, L., Bujnicki, J. and Elofsson, A. Pcons: a neural-network-based consensus predictor that improves fold recognition. Protein Set., 2001, 10(11): p. 2354-2362.
-
(2001)
Protein Set.
, vol.10
, Issue.11
, pp. 2354-2362
-
-
Lundstrom, J.1
Rychlewski, L.2
Bujnicki, J.3
Elofsson, A.4
-
33
-
-
0033537993
-
GenTHREADER: An efficient and reliable protein fold recognition method for genomic sequences
-
Jones, D.T. GenTHREADER: an efficient and reliable protein fold recognition method for genomic sequences. J. Mol. Biol., 1999, 287(4): p. 797-815.
-
(1999)
J. Mol. Biol.
, vol.287
, Issue.4
, pp. 797-815
-
-
Jones, D.T.1
-
34
-
-
10044281116
-
Comprehensive De Novo Structure Prediction in a Systems-biology Context for the Archaea Halobacterium sp. NRC-1
-
Bonneau, R., Baliga, N.S., Deutsch, E., Shannon, P. and Hood, L. Comprehensive De Novo Structure Prediction in a Systems-biology Context for the Archaea Halobacterium sp. NRC-1. Genome Biol., 2004, 5: p. 1-15.
-
(2004)
Genome Biol.
, vol.5
, pp. 1-15
-
-
Bonneau, R.1
Baliga, N.S.2
Deutsch, E.3
Shannon, P.4
Hood, L.5
-
35
-
-
0033538553
-
Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability
-
Thompson, M.J. and Eisenberg, D. Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability. J. Mol. Biol., 1999, 290(2): p. 595-604.
-
(1999)
J. Mol. Biol.
, vol.290
, Issue.2
, pp. 595-604
-
-
Thompson, M.J.1
Eisenberg, D.2
-
36
-
-
0038386050
-
3D-Jury: A simple approach to improve protein structure predictions
-
Ginalski, K., Elofsson, A., Fischer, D. and Rychlewski, L., 3D-Jury: a simple approach to improve protein structure predictions. Bioinformatics, 2003, 19(8): p. 1015-1018.
-
(2003)
Bioinformatics
, vol.19
, Issue.8
, pp. 1015-1018
-
-
Ginalski, K.1
Elofsson, A.2
Fischer, D.3
Rychlewski, L.4
-
37
-
-
0041620404
-
Detection of reliable and unexpected protein fold predictions using 3D-Jury
-
Ginalski, K. and Rychlewski, L. Detection of reliable and unexpected protein fold predictions using 3D-Jury. Nucleic Acids Res., 2003, 31(13): p. 3291-3292.
-
(2003)
Nucleic Acids Res.
, vol.31
, Issue.13
, pp. 3291-3292
-
-
Ginalski, K.1
Rychlewski, L.2
-
38
-
-
0042902833
-
The COG database: An updated version includes eukaryotes
-
Tatusov, R.L., Fedorova, N.D., Jackson, J.J., Jacobs, A.R., Kiryutin, B., Koonin, E.V., Krylov, D.M., Mazumder, R., Mekhedov, S.L., Nikolskaya, A.N., Rao, B.S., Smirnov, S., Sverdlov, A.V., Vasudevan, S., Wolf, Y.I., Yin, J.J. and Natale, D.A. The COG database: an updated version includes eukaryotes. BMC Bioinformatics, 2003, 4 1): p. 41.
-
(2003)
BMC Bioinformatics
, vol.4
, Issue.1
, pp. 41
-
-
Tatusov, R.L.1
Fedorova, N.D.2
Jackson, J.J.3
Jacobs, A.R.4
Kiryutin, B.5
Koonin, E.V.6
Krylov, D.M.7
Mazumder, R.8
Mekhedov, S.L.9
Nikolskaya, A.N.10
Rao, B.S.11
Smirnov, S.12
Sverdlov, A.V.13
Vasudevan, S.14
Wolf, Y.I.15
Yin, J.J.16
Natale, D.A.17
-
39
-
-
0036081062
-
The KEGG databases at Genome Net
-
Kanehisa, M., Goto, S., Kawashima, S. and Nakaya, A. The KEGG databases at Genome Net. Nucleic Acids Res., 2002, 30 1): p. 42-46.
-
(2002)
Nucleic Acids Res.
, vol.30
, Issue.1
, pp. 42-46
-
-
Kanehisa, M.1
Goto, S.2
Kawashima, S.3
Nakaya, A.4
-
40
-
-
0032919364
-
KEGG: Kyoto Encyclopedia of Genes and Genomes
-
Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H. and Kanehisa, M. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res., 1999, 27(1): p. 29-34.
-
(1999)
Nucleic Acids Res.
, vol.27
, Issue.1
, pp. 29-34
-
-
Ogata, H.1
Goto, S.2
Sato, K.3
Fujibuchi, W.4
Bono, H.5
Kanehisa, M.6
-
41
-
-
0031787969
-
Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantilation
-
Roth, F.P., Hughes, J.D., Estep, P.W. and Church, G.M. Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantilation. Nat. Biotechnol., 1998, 16(10): p. 939-945.
-
(1998)
Nat. Biotechnol.
, vol.16
, Issue.10
, pp. 939-945
-
-
Roth, F.P.1
Hughes, J.D.2
Estep, P.W.3
Church, G.M.4
-
42
-
-
0036050681
-
Cluster analysis and its applications to gene expression data
-
Sharan, R., Elkon, R. and Shamir, R. Cluster analysis and its applications to gene expression data. Ernst Schering Res. Found. Workshop, 2002, 38: p. 83-108.
-
(2002)
Ernst Schering Res. Found. Workshop
, vol.38
, pp. 83-108
-
-
Sharan, R.1
Elkon, R.2
Shamir, R.3
-
44
-
-
0037399130
-
Spectral biclustering of microarray data: Coclustering genes and conditions
-
Kluger, Y., Basri, R., Chang, J.T. and Gerstein, M. Spectral biclustering of microarray data: coclustering genes and conditions. Genome Res., 2003, 13(4): p. 703-716.
-
(2003)
Genome Res.
, vol.13
, Issue.4
, pp. 703-716
-
-
Kluger, Y.1
Basri, R.2
Chang, J.T.3
Gerstein, M.4
-
45
-
-
4444367133
-
Biclustering microarray data by Gibbs sampling
-
Sheng, Q., Moreau, Y. and De Moor, B. Biclustering microarray data by Gibbs sampling. Bioinformatics, 2003, 19 Suppl. 2: p. II196-II205.
-
(2003)
Bioinformatics
, vol.19
, Issue.SUPPL. 2
-
-
Sheng, Q.1
Moreau, Y.2
De Moor, B.3
-
46
-
-
11244306358
-
Discovering statistically significant biclusters in gene expression data
-
Tanay, A., Sharan, R. and Shamir, R. Discovering statistically significant biclusters in gene expression data. Bioinformatics, 2002, 18 Suppl. 1: p. S136-144.
-
(2002)
Bioinformatics
, vol.18
, Issue.SUPPL. 1
-
-
Tanay, A.1
Sharan, R.2
Shamir, R.3
-
47
-
-
1542357674
-
Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data
-
Tanay, A., Sharan, R., Kupiec, M. and Shamir, R. Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data. Proc. Natl. Acad. Sci. USA, 2004, 101(9): p. 2981-2986.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, Issue.9
, pp. 2981-2986
-
-
Tanay, A.1
Sharan, R.2
Kupiec, M.3
Shamir, R.4
-
48
-
-
0036211103
-
[Delta]-clusters: Capturing Subspace Correlation in a large Data Set
-
Yang, J., Wang, W., Wang, H. and Yu, P. [delta]-clusters: Capturing Subspace Correlation in a large Data Set. 3rd IEEE International Symposium on BioInformatics and BioEngineering, 2002 p. 517-528.
-
(2002)
3rd IEEE International Symposium on BioInformatics and BioEngineering
, pp. 517-528
-
-
Yang, J.1
Wang, W.2
Wang, H.3
Yu, P.4
-
49
-
-
84942566876
-
Enhanced Biclustering on Expression Data
-
Yang, J., Wang, H., Wang, W. and Yu, P. Enhanced Biclustering on Expression Data. Third IEEE Symposium on BioInformatics and BioEngineering (BIBE'03), 2003: p. 321-327.
-
(2003)
Third IEEE Symposium on BioInformatics and BioEngineering (BIBE'03)
, pp. 321-327
-
-
Yang, J.1
Wang, H.2
Wang, W.3
Yu, P.4
-
50
-
-
0034710876
-
Coupled two-way clustering analysis of gene microarray data
-
Getz, G., Levine, E. and Domany, E. Coupled two-way clustering analysis of gene microarray data. Proc. Natl. Acad. Sci. USA 2000, 97(22): p. 12079-12084.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, Issue.22
, pp. 12079-12084
-
-
Getz, G.1
Levine, E.2
Domany, E.3
-
51
-
-
0037772416
-
Coupled two-way clustering server
-
Getz, G. and Domany, E., Coupled two-way clustering server. Bioinformatics, 2003, 19(9): p. 1153-1154.
-
(2003)
Bioinformatics
, vol.19
, Issue.9
, pp. 1153-1154
-
-
Getz, G.1
Domany, E.2
-
52
-
-
0030034307
-
Heat-shock and general stress response in Bacillus subtilis
-
Hecker, M., Schumann, W. and Volker, U. Heat-shock and general stress response in Bacillus subtilis. Mol. Microbiol., 1996, 19(3): p. 417-428.
-
(1996)
Mol. Microbiol.
, vol.19
, Issue.3
, pp. 417-428
-
-
Hecker, M.1
Schumann, W.2
Volker, U.3
-
53
-
-
0035209219
-
Global transcriptional response of Bacillus subtilis to heat shock
-
Helmann, J.D., Wu, M.F., Kobel, P.A., Gamo, F.J., Wilson, M., Morshedi, M.M., Navre, M. and Paddon, C. Global transcriptional response of Bacillus subtilis to heat shock. J. Bacteriol., 2001, 183(24): p. 7318-7328.
-
(2001)
J. Bacteriol.
, vol.183
, Issue.24
, pp. 7318-7328
-
-
Helmann, J.D.1
Wu, M.F.2
Kobel, P.A.3
Gamo, F.J.4
Wilson, M.5
Morshedi, M.M.6
Navre, M.7
Paddon, C.8
-
54
-
-
0032431906
-
The first gene of the Bacillus subtilis clpC operon, ctsR, encodes a negative regulator of its own operon and other class III heat shock genes
-
Kruger, E. and Hecker, M. The first gene of the Bacillus subtilis clpC operon, ctsR, encodes a negative regulator of its own operon and other class III heat shock genes. J. Bacteriol., 1998, 180(24): p. 6681-6688.
-
(1998)
J. Bacteriol.
, vol.180
, Issue.24
, pp. 6681-6688
-
-
Kruger, E.1
Hecker, M.2
-
55
-
-
0037224322
-
Regulation of the Bacillus subtilis heat shock gene htpG is under positive control
-
Versteeg, S., Escher, A., Wende, A., Wiegert, T. and Schumann, W. Regulation of the Bacillus subtilis heat shock gene htpG is under positive control. J. Bacteriol., 2003, 185(2 : p. 466-474.
-
(2003)
J. Bacteriol.
, vol.185
, Issue.2
, pp. 466-474
-
-
Versteeg, S.1
Escher, A.2
Wende, A.3
Wiegert, T.4
Schumann, W.5
-
56
-
-
0036035079
-
Global analysis of the Bacillus subtilis Fur regulon and the iron starvation stimulon
-
Baichoo, N., Wang, T., Ye, R. and Helmann, J.D. Global analysis of the Bacillus subtilis Fur regulon and the iron starvation stimulon. Mol. Microbiol., 2002, 45(6): p. 1613-1629.
-
(2002)
Mol. Microbiol.
, vol.45
, Issue.6
, pp. 1613-1629
-
-
Baichoo, N.1
Wang, T.2
Ye, R.3
Helmann, J.D.4
-
57
-
-
0042952817
-
The global transcriptional response of Bacillus subtilis to manganese involves the MntR, Fur, TnrA and sigmaB regulons
-
Guedon, E., Moore, C.M., Que, Q., Wang, T., Ye, R.W. and Helmann, J.D. The global transcriptional response of Bacillus subtilis to manganese involves the MntR, Fur, TnrA and sigmaB regulons. Mol. Microbiol., 2003, 49(6): p. 1477-1491.
-
(2003)
Mol. Microbiol.
, vol.49
, Issue.6
, pp. 1477-1491
-
-
Guedon, E.1
Moore, C.M.2
Que, Q.3
Wang, T.4
Ye, R.W.5
Helmann, J.D.6
-
58
-
-
0043032822
-
Global iron-dependent gene regulation in Escherichia coli. A new mechanism for iron homeostasis
-
Mchugh, J.P., Rodriguez-Quinones, F., Abdul-Tehrani, H., Svistunenko, D.A., Poole, R.K., Cooper, C.E. and Andrews, S.C. Global iron-dependent gene regulation in Escherichia coli. A new mechanism for iron homeostasis. J. Biol. Chem., 2003, 278(32): p. 29478-29486.
-
(2003)
J. Biol. Chem.
, vol.278
, Issue.32
, pp. 29478-29486
-
-
Mchugh, J.P.1
Rodriguez-Quinones, F.2
Abdul-Tehrani, H.3
Svistunenko, D.A.4
Poole, R.K.5
Cooper, C.E.6
Andrews, S.C.7
-
59
-
-
0034932337
-
DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide
-
Zheng, M., Wang, X., Templeton, L.J, Smulski, D.R., Larossa, R.A. and Storz, G. DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide. J. Bacteriol., 2001, 183(15): p. 4562-4570.
-
(2001)
J. Bacteriol.
, vol.183
, Issue.15
, pp. 4562-4570
-
-
Zheng, M.1
Wang, X.2
Templeton, L.J.3
Smulski, D.R.4
Larossa, R.A.5
Storz, G.6
-
60
-
-
1242318677
-
Transcriptome and proteome analysis of Bacillus subtilis gene expression in response to superoxide and peroxide stress
-
Mostertz, J., Scharf, C., Hecker, M. and Homuth, G. Transcriptome and proteome analysis of Bacillus subtilis gene expression in response to superoxide and peroxide stress. Microbiology, 2004, 150(Pt. 2): p. 497-512.
-
(2004)
Microbiology
, vol.150
, Issue.PART 2
, pp. 497-512
-
-
Mostertz, J.1
Scharf, C.2
Hecker, M.3
Homuth, G.4
-
61
-
-
3042855371
-
Response of Bacillus subtilis to nitric oxide and the nitrosating agent sodium nitroprusside
-
Moore, C.M., Nakano, M.M., Wang, T., Ye, R.W. and Helmann, J.D. Response of Bacillus subtilis to nitric oxide and the nitrosating agent sodium nitroprusside. J. Bacteriol., 2004, 186(14): p. 4655-4664.
-
(2004)
J. Bacteriol.
, vol.186
, Issue.14
, pp. 4655-4664
-
-
Moore, C.M.1
Nakano, M.M.2
Wang, T.3
Ye, R.W.4
Helmann, J.D.5
-
62
-
-
1642565394
-
Induction of the sufA operon encoding Fe-S assembly proteins by superoxide generators and hydrogen peroxide: Involvement of OxyR, IHF and an unidentified oxidant-responsive factor
-
Lee, J.H., Yeo, W.S. and Roe, J.H. Induction of the sufA operon encoding Fe-S assembly proteins by superoxide generators and hydrogen peroxide: involvement of OxyR, IHF and an unidentified oxidant-responsive factor. Mol. Microbiol., 2004, 51(6 : p. 1745-1755.
-
(2004)
Mol. Microbiol.
, vol.51
, Issue.6
, pp. 1745-1755
-
-
Lee, J.H.1
Yeo, W.S.2
Roe, J.H.3
-
63
-
-
10744220854
-
Transcriptional regulation of the phoPR operon in Bacillus subtilis
-
Pragai, Z., Allenby, N.E., O'connor, N., Dubrac, S., Rapoport, G., Msadek, T. and Harwood, C.R. Transcriptional regulation of the phoPR operon in Bacillus subtilis. J. Bacteriol., 2004, 186(4): p. 1182-1190.
-
(2004)
J. Bacteriol.
, vol.186
, Issue.4
, pp. 1182-1190
-
-
Pragai, Z.1
Allenby, N.E.2
O'Connor, N.3
Dubrac, S.4
Rapoport, G.5
Msadek, T.6
Harwood, C.R.7
-
64
-
-
0035808168
-
Genomic analysis of high-cell-density recombinant Escherichia coli fermentation and "cell conditioning" for improved recombinant protein yield
-
Gill, R.T., Delisa, M.P., Valdes, J.J. and Bentley, W.E. Genomic analysis of high-cell-density recombinant Escherichia coli fermentation and "cell conditioning" for improved recombinant protein yield. Biotechnol. Bioeng., 2001, 72(1): p. 85-95.
-
(2001)
Biotechnol. Bioeng.
, vol.72
, Issue.1
, pp. 85-95
-
-
Gill, R.T.1
Delisa, M.P.2
Valdes, J.J.3
Bentley, W.E.4
-
65
-
-
0036186218
-
Role of the general stress response during strong overexpression of a heterologous gene in Escherichia coli
-
Schweder, T., Lin, H.Y., Jurgen, B., Breitenstein, A., Riemschneider, S., Khalameyzer, V., Gupta, A., Buttner, K. and Neubauer, P. Role of the general stress response during strong overexpression of a heterologous gene in Escherichia coli. Appl. Microbiol. Biotechnol., 2002, 58(3): p. 330-337.
-
(2002)
Appl. Microbiol. Biotechnol.
, vol.58
, Issue.3
, pp. 330-337
-
-
Schweder, T.1
Lin, H.Y.2
Jurgen, B.3
Breitenstein, A.4
Riemschneider, S.5
Khalameyzer, V.6
Gupta, A.7
Buttner, K.8
Neubauer, P.9
-
66
-
-
0035073906
-
Proteome and transcriptome based analysis of Bacillus subtilis cells overproducing an insoluble heterologous protein
-
Jurgen, B., Hansclike, R., Sarvas, M., Hecker, M. and Schweder, T. Proteome and transcriptome based analysis of Bacillus subtilis cells overproducing an insoluble heterologous protein. Appl. Microbiol. Biotechnol., 2001, 55(3): p. 326-332.
-
(2001)
Appl. Microbiol. Biotechnol.
, vol.55
, Issue.3
, pp. 326-332
-
-
Jurgen, B.1
Hansclike, R.2
Sarvas, M.3
Hecker, M.4
Schweder, T.5
-
67
-
-
0037338332
-
DNA microarray analyses of the long-term adaptive response of Escherichia coli to acetate and propionate
-
Polen, T., Rittmann, D., Wendisch, V.F. and Sahm, H. DNA microarray analyses of the long-term adaptive response of Escherichia coli to acetate and propionate. Appl. Environ. MicroBiol., 2003, 69(3): p. 1759-1774.
-
(2003)
Appl. Environ. MicroBiol.
, vol.69
, Issue.3
, pp. 1759-1774
-
-
Polen, T.1
Rittmann, D.2
Wendisch, V.F.3
Sahm, H.4
-
68
-
-
0037317457
-
Bacillus subtilis during feast and famine: Visualization of the overall regulation of protein synthesis during glucose starvation by proteome analysis
-
Bernhardt, J., Weibezahn, J., Scharf, C. and Hecker, M. Bacillus subtilis during feast and famine: visualization of the overall regulation of protein synthesis during glucose starvation by proteome analysis. Genome Res., 2003, 13(2): p. 224-237.
-
(2003)
Genome Res.
, vol.13
, Issue.2
, pp. 224-237
-
-
Bernhardt, J.1
Weibezahn, J.2
Scharf, C.3
Hecker, M.4
-
69
-
-
0034710992
-
DNA microarroy analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli
-
Khodursky, A.B., Peter, B.J., Cozzarelli, N.R., Botstein, D., Brown, P.O. and Yanofsky, C. DNA microarroy analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli. Proc. Natl. Acad. Sci. USA, 2000, 97(22): p. 12170-12175.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, Issue.22
, pp. 12170-12175
-
-
Khodursky, A.B.1
Peter, B.J.2
Cozzarelli, N.R.3
Botstein, D.4
Brown, P.O.5
Yanofsky, C.6
-
70
-
-
1442349125
-
Killing by Ampicillin and Ofloxacin Induces Overlapping Changes in Escherichia coli Transcription Profile
-
Kaldalu, N., Mei, R. and Lewis, K. Killing by Ampicillin and Ofloxacin Induces Overlapping Changes in Escherichia coli Transcription Profile. Antimicrob. Agents Chemother., 2004, 48(8): p. 3213.
-
(2004)
Antimicrob. Agents Chemother.
, vol.48
, Issue.8
, pp. 3213
-
-
Kaldalu, N.1
Mei, R.2
Lewis, K.3
-
71
-
-
0035023305
-
Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli
-
Courcelle, J., Khodursky, A., Peter, B., Brown, P.O. and Hanawalt, P.C. Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli. Genetics, 2001, 158(1): p. 41-64.
-
(2001)
Genetics
, vol.158
, Issue.1
, pp. 41-64
-
-
Courcelle, J.1
Khodursky, A.2
Peter, B.3
Brown, P.O.4
Hanawalt, P.C.5
-
72
-
-
0142214662
-
Genome-wide transcriptional profiling analysis of adaptation of Bacillus subtilis to high salinity
-
Steil, L., Hoffmann, T., Budde, I., Volker, U. and Bremer, E. Genome-wide transcriptional profiling analysis of adaptation of Bacillus subtilis to high salinity. J. Bacteriol., 2003, 185 21): p. 6358-6370.
-
(2003)
J. Bacteriol.
, vol.185
, Issue.21
, pp. 6358-6370
-
-
Steil, L.1
Hoffmann, T.2
Budde, I.3
Volker, U.4
Bremer, E.5
-
73
-
-
0036178405
-
High-salinity-induced iron limitation in Bacillus subtilis
-
Hoffmann, T., Schutz, A., Brosius, M., Volker, A., Volker, U. and Bremer, E. High-salinity-induced iron limitation in Bacillus subtilis. J. Bacteriol., 2002, 184(3): p. 718-727.
-
(2002)
J. Bacteriol.
, vol.184
, Issue.3
, pp. 718-727
-
-
Hoffmann, T.1
Schutz, A.2
Brosius, M.3
Volker, A.4
Volker, U.5
Bremer, E.6
-
75
-
-
0035724157
-
Genome-wide analysis of the general stress response in Bacillus subtilis
-
Price, C.W., Fawcett, P., Ceremonie, H., Su, N., Murphy, C.K. and Youngman, P. Genome-wide analysis of the general stress response in Bacillus subtilis. Mol. Microbiol., 2001, 41(4): p. 757-774.
-
(2001)
Mol. Microbiol.
, vol.41
, Issue.4
, pp. 757-774
-
-
Price, C.W.1
Fawcett, P.2
Ceremonie, H.3
Su, N.4
Murphy, C.K.5
Youngman, P.6
-
76
-
-
0034810821
-
Global analysis of the general stress response of Bacillus subtilis
-
Petersohn, A., Brigulla, M., Haas, S., Hoheisel, J.D., Volker, U. and Hecker, M. Global analysis of the general stress response of Bacillus subtilis. J. Bacteriol., 2001, 183 19): p. 5617-5631.
-
(2001)
J. Bacteriol.
, vol.183
, Issue.19
, pp. 5617-5631
-
-
Petersohn, A.1
Brigulla, M.2
Haas, S.3
Hoheisel, J.D.4
Volker, U.5
Hecker, M.6
-
77
-
-
0022471589
-
Gene encoding the sigma 37 species of RNA polymerase sigma factor from Bacillus subtilis
-
Binnie, C., Lampe, M. and Losick, R. Gene encoding the sigma 37 species of RNA polymerase sigma factor from Bacillus subtilis. Proc. Natl. Acad. Sci. USA, 1986, 83(16): p. 5943-5947.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, Issue.16
, pp. 5943-5947
-
-
Binnie, C.1
Lampe, M.2
Losick, R.3
-
78
-
-
0032921346
-
CtsR, a novel regulator of stress and heat shock response, controls clp and molecular chaperone gene expression in gram-positive bacteria
-
Derre, I., Rapoport, G. and Msadek, T. CtsR, a novel regulator of stress and heat shock response, controls clp and molecular chaperone gene expression in gram-positive bacteria. Mol. Microbiol., 1999, 31(1): p. 117-131.
-
(1999)
Mol. Microbiol.
, vol.31
, Issue.1
, pp. 117-131
-
-
Derre, I.1
Rapoport, G.2
Msadek, T.3
-
79
-
-
0030028240
-
hrcA, the first gene of the Bacillus subtilis dnaK operon encodes a negative regulator of class I heat shock genes
-
Schulz, A. and Schumann, W. hrcA, the first gene of the Bacillus subtilis dnaK operon encodes a negative regulator of class I heat shock genes. J. Bacteriol., 1996, 178(4): p. 1088-1093.
-
(1996)
J. Bacteriol.
, vol.178
, Issue.4
, pp. 1088-1093
-
-
Schulz, A.1
Schumann, W.2
-
80
-
-
0036786262
-
A novel class of heat and secretion stress-responsive genes is controlled by the autoregulated CssRS two-component system of Bacillus sublilis
-
Darmon, E., Noone, D., Masson, A., Bron, S., Kuipers, O.P., Devine, K.M. and Van Dijl, J.M. A novel class of heat and secretion stress-responsive genes is controlled by the autoregulated CssRS two-component system of Bacillus sublilis. J. Bacteriol., 2002, 184(20): p. 5661-5671.
-
(2002)
J. Bacteriol.
, vol.184
, Issue.20
, pp. 5661-5671
-
-
Darmon, E.1
Noone, D.2
Masson, A.3
Bron, S.4
Kuipers, O.P.5
Devine, K.M.6
Van Dijl, J.M.7
-
81
-
-
0034977251
-
Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate
-
Pomposiello, P.J., Bennik, M.H. and Demple, B. Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate. J. Bacteriol., 2001, 183 13): p. 3890-3902.
-
(2001)
J. Bacteriol.
, vol.183
, Issue.13
, pp. 3890-3902
-
-
Pomposiello, P.J.1
Bennik, M.H.2
Demple, B.3
-
82
-
-
0031746383
-
PhoP-P and RNA polymerase sigmaA holoenzyme are sufficient for transcription of Pho regulon promoters in Bacillus subtilis: PhoP-P activator sites within the coding region stimulate transcription in vitro
-
Qi, Y. and Hulett, F.M. PhoP-P and RNA polymerase sigmaA holoenzyme are sufficient for transcription of Pho regulon promoters in Bacillus subtilis: PhoP-P activator sites within the coding region stimulate transcription in vitro. Mol. Microhiol., 1998, 28 6): p. 1187-1197.
-
(1998)
Mol. Microhiol.
, vol.28
, Issue.6
, pp. 1187-1197
-
-
Qi, Y.1
Hulett, F.M.2
-
83
-
-
0023192483
-
Cloning and nucleotide sequence of phoP, the regulatory gene for alkaline phosphatase and phosphodiesterase in Bacillus subtilis
-
Seki, T., Yoshikawa, H., Takahashi, H. and Saito, H. Cloning and nucleotide sequence of phoP, the regulatory gene for alkaline phosphatase and phosphodiesterase in Bacillus subtilis. J. Bacteriol., 1987, 169(7): p. 2913-2916.
-
(1987)
J. Bacteriol.
, vol.169
, Issue.7
, pp. 2913-2916
-
-
Seki, T.1
Yoshikawa, H.2
Takahashi, H.3
Saito, H.4
-
84
-
-
0024220909
-
Nucleotide sequence of the Bacillus subtilis phoR gene
-
Seki, T., Yoshikawa, H., Takahashi, H. and Saito, H. Nucleotide sequence of the Bacillus subtilis phoR gene. J. Bacteriol., 1988, 170(12): p. 5935-5938.
-
(1988)
J. Bacteriol.
, vol.170
, Issue.12
, pp. 5935-5938
-
-
Seki, T.1
Yoshikawa, H.2
Takahashi, H.3
Saito, H.4
-
85
-
-
1242275398
-
Multiple stress signal integration in the regulation o the complex sigma S-dependent csiD-ygaF-gabDTP operon in Escherichia coli
-
Metzner, M., Germer, J. and Hengge, R. Multiple stress signal integration in the regulation o the complex sigma S-dependent csiD-ygaF-gabDTP operon in Escherichia coli. Mol. Microbiol., 2004, 51(3): p. 799-811.
-
(2004)
Mol. Microbiol.
, vol.51
, Issue.3
, pp. 799-811
-
-
Metzner, M.1
Germer, J.2
Hengge, R.3
-
86
-
-
0036899077
-
Stationary phase gene regulation: What makes an Escherichia coli promoter sigmaS-selective?
-
Hengge-Aronis, R. Stationary phase gene regulation: what makes an Escherichia coli promoter sigmaS-selective? Curr. Opin. MicroBiol., 2002, 5(6): p. 591-595.
-
(2002)
Curr. Opin. MicroBiol.
, vol.5
, Issue.6
, pp. 591-595
-
-
Hengge-Aronis, R.1
-
87
-
-
0038010151
-
DNA supercoiling contributes to disconnect sigmaS accumulation from sigmaS-dependent transcription in Escherichia coli
-
Bordes, P., Conter, A., Morales, V., Bouvier, J., Kolb, A. and Gutierrez, C. DNA supercoiling contributes to disconnect sigmaS accumulation from sigmaS-dependent transcription in Escherichia coli. Mol. Microbiol., 2003, 48(2): p. 561-571.
-
(2003)
Mol. Microbiol.
, vol.48
, Issue.2
, pp. 561-571
-
-
Bordes, P.1
Conter, A.2
Morales, V.3
Bouvier, J.4
Kolb, A.5
Gutierrez, C.6
-
88
-
-
0036714331
-
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase
-
table of contents
-
Hengge-Aronis, R. Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase. Microbiol. Mol. Biol. Rev., 2002, 66(3): p. 373-395, table of contents.
-
(2002)
Microbiol. Mol. Biol. Rev.
, vol.66
, Issue.3
, pp. 373-395
-
-
Hengge-Aronis, R.1
-
89
-
-
3142678124
-
Molecular components of physiological stress responses in Escherichia coli
-
Wick, L.M. and Egli, T. Molecular components of physiological stress responses in Escherichia coli. Adv. Biochem. Eng. Biotechnol., 2004, 89: p. 1-45.
-
(2004)
Adv. Biochem. Eng. Biotechnol.
, vol.89
, pp. 1-45
-
-
Wick, L.M.1
Egli, T.2
-
90
-
-
0037052493
-
Prokaryotic diversity - Magnitude, dynamics, and controlling factors
-
Torsvik, V., Ovreas, L. and Thingstad, T.F. Prokaryotic diversity - magnitude, dynamics, and controlling factors. Science, 2002, 296(5570): p. 1064-1066.
-
(2002)
Science
, vol.296
, Issue.5570
, pp. 1064-1066
-
-
Torsvik, V.1
Ovreas, L.2
Thingstad, T.F.3
-
91
-
-
0021756564
-
Mechanism of colour discrimination by a bacterial sensory rhodopsin
-
Spudich, J.L. and Bogomolni, R.A. Mechanism of colour discrimination by a bacterial sensory rhodopsin. Nature, 1984, 312(5994): p. 509-513.
-
(1984)
Nature
, vol.312
, Issue.5994
, pp. 509-513
-
-
Spudich, J.L.1
Bogomolni, R.A.2
-
92
-
-
0024741720
-
Sensory rhodopsins I and II modulate a methylation/demethylation system in Halobacterium halobium phototaxis
-
Spudich, E.N., Takahashi, T. and Spudich, J.L. Sensory rhodopsins I and II modulate a methylation/demethylation system in Halobacterium halobium phototaxis. Proc. Natl. Acad. Sci. USA, 1989, 86(20): p. 7746-7750.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, Issue.20
, pp. 7746-7750
-
-
Spudich, E.N.1
Takahashi, T.2
Spudich, J.L.3
-
93
-
-
0027132573
-
Color sensing in the Archaea: A eukaryotic-like receptor coupled to a prokaryotic transducer
-
Spudich, J.L. Color sensing in the Archaea: a eukaryotic-like receptor coupled to a prokaryotic transducer. J. Bacteriol., 1993, 175(24): p. 7755-7761.
-
(1993)
J. Bacteriol.
, vol.175
, Issue.24
, pp. 7755-7761
-
-
Spudich, J.L.1
-
94
-
-
0000373165
-
Identification of a third rhodopsin-like pigment in phototactic Halobacterium halobium
-
Bogomolni, R.A. and Spudich, J.L. Identification of a third rhodopsin-like pigment in phototactic Halobacterium halobium. Proc. Natl. Acad. Sci. USA, 1982, 79(20): p. 6250-6254.
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, Issue.20
, pp. 6250-6254
-
-
Bogomolni, R.A.1
Spudich, J.L.2
-
95
-
-
0031944976
-
An archaeal aerotaxis transducer combines subunit I core structures of eukaryotic cytochrome c oxidase and eubacterial methyl-accepting chemotaxis proteins
-
Brooun, A., Bell, J., Freitas, T., Larsen, R.W. and Alam, M. An archaeal aerotaxis transducer combines subunit I core structures of eukaryotic cytochrome c oxidase and eubacterial methyl-accepting chemotaxis proteins. J. Bacteriol., 1998, 180(7): p. 1642-1646.
-
(1998)
J. Bacteriol.
, vol.180
, Issue.7
, pp. 1642-1646
-
-
Brooun, A.1
Bell, J.2
Freitas, T.3
Larsen, R.W.4
Alam, M.5
-
96
-
-
0027316841
-
Identification and analysis of the gas vesicle gene cluster on an unstable plasmid of Halobacterium halobium
-
Dassarma, S. Identification and analysis of the gas vesicle gene cluster on an unstable plasmid of Halobacterium halobium. Experientia, 1993, 49(6-7): p. 482-486.
-
(1993)
Experientia
, vol.49
, Issue.6-7
, pp. 482-486
-
-
Dassarma, S.1
-
97
-
-
12944270421
-
From the cover: Genome sequence of halobacterium species NRC-1
-
Ng, W.V., Kennedy, S.P., Mahairas, G.G., Berquist, B., Pan, M., Shukla, H.D., Lasky, S.R., Baliga, N.S., Thorsson, V., Sbrogna, J., Swartzell, S., Weir, D., Hall, J., Dahl, T.A., Welti, R., Goo, Y.A., Leithauser, B., Keller, K., Cruz, R., Danson, M.J., Hough, D.W., Maddocks, D.G., Jablonski, P.E., Krebs, M.P., Angevine, C.M. and Dale, H. From the cover: genome sequence of halobacterium species NRC-1. Proc. Natl. Acad. Sci. USA, 2000, 97(22): p. 12176-12181.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, Issue.22
, pp. 12176-12181
-
-
Ng, W.V.1
Kennedy, S.P.2
Mahairas, G.G.3
Berquist, B.4
Pan, M.5
Shukla, H.D.6
Lasky, S.R.7
Baliga, N.S.8
Thorsson, V.9
Sbrogna, J.10
Swartzell, S.11
Weir, D.12
Hall, J.13
Dahl, T.A.14
Welti, R.15
Goo, Y.A.16
Leithauser, B.17
Keller, K.18
Cruz, R.19
Danson, M.J.20
Hough, D.W.21
Maddocks, D.G.22
Jablonski, P.E.23
Krebs, M.P.24
Angevine, C.M.25
Dale, H.26
more..
-
98
-
-
10044226708
-
-
Plainview, N.Y.: Cold Spring Harbor Laboratory Press
-
Dassarma, S. and Fleischmann, E.M. Halophiles. Archaea: a laboratory manual. 1995, Plainview, N.Y.: Cold Spring Harbor Laboratory Press. xvi, 280.
-
(1995)
Halophiles. Archaea: A Laboratory Manual
, vol.16
, pp. 280
-
-
Dassarma, S.1
Fleischmann, E.M.2
-
99
-
-
0032938307
-
Saturation mutagenesis of the TATA box and upstream activator sequence in the haloarchaeal bop gene promoter
-
Baliga, N.S. and Dassarma, S. Saturation mutagenesis of the TATA box and upstream activator sequence in the haloarchaeal bop gene promoter. J. Bacteriol., 1999, 181(8): p. 2513-2518.
-
(1999)
J. Bacteriol.
, vol.181
, Issue.8
, pp. 2513-2518
-
-
Baliga, N.S.1
Dassarma, S.2
-
100
-
-
0034077513
-
Saturation mutagenesis of the haloarchaeal bop gene promoter: Identification of DNA supercoiling sensitivity sites and absence of TFB recognition element and UAS enhancer activity
-
Baliga, N.S. and Dassarma, S. Saturation mutagenesis of the haloarchaeal bop gene promoter: identification of DNA supercoiling sensitivity sites and absence of TFB recognition element and UAS enhancer activity. Mol. Microbiol., 2000, 36(5): p. 1175-1183.
-
(2000)
Mol. Microbiol.
, vol.36
, Issue.5
, pp. 1175-1183
-
-
Baliga, N.S.1
Dassarma, S.2
-
101
-
-
0033962956
-
Homologous gene knockout in the archaeon Halobacterium salinarum with ura3 as a counterselectable marker
-
Peck, R.F., Dassarma, S. and Krebs, M.P. Homologous gene knockout in the archaeon Halobacterium salinarum with ura3 as a counterselectable marker. Mol. Microbiol., 2000, 35(3 : p. 667-676.
-
(2000)
Mol. Microbiol.
, vol.35
, Issue.3
, pp. 667-676
-
-
Peck, R.F.1
Dassarma, S.2
Krebs, M.P.3
-
102
-
-
0035956923
-
Genomic and genetic dissection of an archaeal regulon
-
Baliga, N.S., Kennedy, S.P., Ng, W.V., Hood, L. and Dassarma, S. Genomic and genetic dissection of an archaeal regulon. Proc. Natl. Acad. Sci. USA, 2001, 98(5): p. 2521-2525.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, Issue.5
, pp. 2521-2525
-
-
Baliga, N.S.1
Kennedy, S.P.2
Ng, W.V.3
Hood, L.4
Dassarma, S.5
-
103
-
-
0028921912
-
Catabolic ornithine transcarbamylase of Halobacterium halobium (salinarium): Purification, characterization, sequence determination, and evolution
-
Ruepp, A., Muller, H.N., Lottspeich, F. and Soppa, J. Catabolic ornithine transcarbamylase of Halobacterium halobium (salinarium): purification, characterization, sequence determination, and evolution. J. Bacteriol., 1995, 177(5): p. 1129-1136.
-
(1995)
J. Bacteriol.
, vol.177
, Issue.5
, pp. 1129-1136
-
-
Ruepp, A.1
Muller, H.N.2
Lottspeich, F.3
Soppa, J.4
-
104
-
-
0029761908
-
Fermentative arginine degradation in Halobacterium salinarium (formerly Halobacterium halobium): Genes, gene products, and transcripts of the arcRACB gene cluster
-
Ruepp, A. and Soppa, J. Fermentative arginine degradation in Halobacterium salinarium (formerly Halobacterium halobium): genes, gene products, and transcripts of the arcRACB gene cluster. J. Bacteriol. 1996, 178(16): p. 4942-4947.
-
(1996)
J. Bacteriol.
, vol.178
, Issue.16
, pp. 4942-4947
-
-
Ruepp, A.1
Soppa, J.2
-
105
-
-
0030746348
-
Repair of extensive ionizing-radiation DNA damage at 95 degrees C in the hyperthermophilic archaeon Pyrococcus furiosus
-
Diruggiero, J., Santangelo, N., Nackerdien, Z., Ravel, J. and Robb, F.T. Repair of extensive ionizing-radiation DNA damage at 95 degrees C in the hyperthermophilic archaeon Pyrococcus furiosus. J. Bacteriol., 1997, 179(14): p. 4643-4645.
-
(1997)
J. Bacteriol.
, vol.179
, Issue.14
, pp. 4643-4645
-
-
Diruggiero, J.1
Santangelo, N.2
Nackerdien, Z.3
Ravel, J.4
Robb, F.T.5
-
106
-
-
0033198679
-
Why is Deinococcus radiodurans so resistant to ionizing radiation?
-
Battista, J.R., Earl, A.M. and Park, M.J. Why is Deinococcus radiodurans so resistant to ionizing radiation? Trends MicroBiol., 1999, 7(9): p. 362-365.
-
(1999)
Trends MicroBiol.
, vol.7
, Issue.9
, pp. 362-365
-
-
Battista, J.R.1
Earl, A.M.2
Park, M.J.3
-
107
-
-
0037901860
-
Genomic DNA of Nostoc commune (Cyanobacteria) becomes covalently modified during long-term (decades) desiccation but is protected from oxidative damage and degradation
-
Shirkey, B., Mcmaster, N.J., Smith, S.C., Wright, D.J., Rodriguez, H., Jaruga, P., Birincioglu, M., Helm, R.F. and Potts, M. Genomic DNA of Nostoc commune (Cyanobacteria) becomes covalently modified during long-term (decades) desiccation but is protected from oxidative damage and degradation. Nucleic Acids Res., 2003, 31(12): p. 2995-3005.
-
(2003)
Nucleic Acids Res.
, vol.31
, Issue.12
, pp. 2995-3005
-
-
Shirkey, B.1
Mcmaster, N.J.2
Smith, S.C.3
Wright, D.J.4
Rodriguez, H.5
Jaruga, P.6
Birincioglu, M.7
Helm, R.F.8
Potts, M.9
-
108
-
-
0027948550
-
Desiccation tolerance of prokaryotes
-
Potts, M. Desiccation tolerance of prokaryotes. Microhiol. Rev., 1994, 58: p. 755-780.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 755-780
-
-
Potts, M.1
-
109
-
-
0032863453
-
DNA repair systems in archaea: Mementos from the last universal common ancestor?
-
Diruggiero, J., Brown, J.R., Bogert, A.P. and Robb, F.T. DNA repair systems in archaea: mementos from the last universal common ancestor? J. Mol. Evol., 1999, 49(4): p. 474-484.
-
(1999)
J. Mol. Evol.
, vol.49
, Issue.4
, pp. 474-484
-
-
Diruggiero, J.1
Brown, J.R.2
Bogert, A.P.3
Robb, F.T.4
-
110
-
-
0034704066
-
Mutational analysis of the Pyrococcus furiosus holliday junction resolvase hjc revealed functionally important residues for dimer formation, junction DNA binding, and cleavage activities
-
Komori, K., Sakae, S., Daiyasu, H., Toh, H., Morikawa, K., Shinagawa, H. and Ishino, Y. Mutational analysis of the Pyrococcus furiosus holliday junction resolvase hjc revealed functionally important residues for dimer formation, junction DNA binding, and cleavage activities. J. Biol. Chem., 2000, 275(51): p. 40385-40391.
-
(2000)
J. Biol. Chem.
, vol.275
, Issue.51
, pp. 40385-40391
-
-
Komori, K.1
Sakae, S.2
Daiyasu, H.3
Toh, H.4
Morikawa, K.5
Shinagawa, H.6
Ishino, Y.7
-
111
-
-
0034721803
-
Both RadA and RadB are involved in homologous recombination in Pyrococcus furiosus
-
Komori, K., Miyata, T., Diruggiero, J., Holley-Shanks, R., Hayashi, I., Cann, I.K., Mayanagi, K., Shinagawa, H. and Ishino, Y. Both RadA and RadB are involved in homologous recombination in Pyrococcus furiosus. J. Biol. Chem., 2000, 275(43): p. 33782-33790.
-
(2000)
J. Biol. Chem.
, vol.275
, Issue.43
, pp. 33782-33790
-
-
Komori, K.1
Miyata, T.2
Diruggiero, J.3
Holley-Shanks, R.4
Hayashi, I.5
Cann, I.K.6
Mayanagi, K.7
Shinagawa, H.8
Ishino, Y.9
-
112
-
-
0035906860
-
Structural biochemistry and interaction architecture of the DNA double- strand break repair Mre11 nuclease and Rad50-ATPase
-
Hopfner, K.P., Karcher, A., Craig, L., Woo, T.T., Carney, J.P. and Tainer, J.A. Structural biochemistry and interaction architecture of the DNA double- strand break repair Mre11 nuclease and Rad50-ATPase. Cell, 2001, 105(4): p. 473-485.
-
(2001)
Cell
, vol.105
, Issue.4
, pp. 473-485
-
-
Hopfner, K.P.1
Karcher, A.2
Craig, L.3
Woo, T.T.4
Carney, J.P.5
Tainer, J.A.6
-
113
-
-
0036305477
-
NurA, a novel 5′-3′ nuclease gene linked to rad50 and mre11 homologs of thermophilic Archaea
-
Constantinesco, F., Forterre, P. and Elie, C. NurA, a novel 5′-3′ nuclease gene linked to rad50 and mre11 homologs of thermophilic Archaea. EMBO Rep., 2002, 3(6): p. 537-542.
-
(2002)
EMBO Rep.
, vol.3
, Issue.6
, pp. 537-542
-
-
Constantinesco, F.1
Forterre, P.2
Elie, C.3
-
114
-
-
0032079749
-
RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange
-
Seitz, E.M., Brockman, J.P., Sandler, S.J., Clark, A.J. and Kowalczykowski, S.C. RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange. Genes Dev., 1998, 12 9): p. 1248-1253.
-
(1998)
Genes Dev.
, vol.12
, Issue.9
, pp. 1248-1253
-
-
Seitz, E.M.1
Brockman, J.P.2
Sandler, S.J.3
Clark, A.J.4
Kowalczykowski, S.C.5
-
115
-
-
0031034269
-
Construction and analysis of a recombination-deficient (radA) mutant of Haloferax volcanii
-
Woods, W.G. and Dyall-Smith, M.L. Construction and analysis of a recombination-deficient (radA) mutant of Haloferax volcanii. Mol. Microbiol., 1997, 23(4): p. 791-797.
-
(1997)
Mol. Microbiol.
, vol.23
, Issue.4
, pp. 791-797
-
-
Woods, W.G.1
Dyall-Smith, M.L.2
-
116
-
-
3042615963
-
Systems Level Insights Into the Stress Response to UV Radiation in the Halophilic Archaeon Halobacterium NRC-1
-
Baliga, N.S., Bjork, S.J., Bonneau, R., Pan, M., Iloanusi, C., Kottemann, M.C.H., Hood, L. and Diruggiero, J. Systems Level Insights Into the Stress Response to UV Radiation in the Halophilic Archaeon Halobacterium NRC-1. Genome Res., 2004, 14(6 : p. 1025-1035.
-
(2004)
Genome Res.
, vol.14
, Issue.6
, pp. 1025-1035
-
-
Baliga, N.S.1
Bjork, S.J.2
Bonneau, R.3
Pan, M.4
Iloanusi, C.5
Kottemann, M.C.H.6
Hood, L.7
Diruggiero, J.8
-
117
-
-
0035149551
-
Remodeling of yeast genome expression in response to environmental changes
-
Causton, H.C., Ren, B., Koh, S.S., Harbison, C.T., Kanin, E., Jennings, E.G., Lee, T.I., True, H.L., Lander, E.S. and Young, R.A. Remodeling of yeast genome expression in response to environmental changes. Mol. Biol. Cell, 2001, 12(2): p. 323-337.
-
(2001)
Mol. Biol. Cell
, vol.12
, Issue.2
, pp. 323-337
-
-
Causton, H.C.1
Ren, B.2
Koh, S.S.3
Harbison, C.T.4
Kanin, E.5
Jennings, E.G.6
Lee, T.I.7
True, H.L.8
Lander, E.S.9
Young, R.A.10
-
118
-
-
0037388447
-
Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation
-
Liu, Y., Zhou, J., Omelchenko, M.V., Beliaev, A.S., Venkateswaran, A., Stair, J., Wu, L., Thompson, D.K., Xu, D., Rogozin, I.B., Gaidamakova, E.K., Zhai, M., Makarova, K.S., Koonin, E.V. and Daly, M.J. Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation. Proc. Natl. Acad. Sci. USA, 2003, 100 7): p. 4191-4196.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, Issue.7
, pp. 4191-4196
-
-
Liu, Y.1
Zhou, J.2
Omelchenko, M.V.3
Beliaev, A.S.4
Venkateswaran, A.5
Stair, J.6
Wu, L.7
Thompson, D.K.8
Xu, D.9
Rogozin, I.B.10
Gaidamakova, E.K.11
Zhai, M.12
Makarova, K.S.13
Koonin, E.V.14
Daly, M.J.15
-
119
-
-
0033229970
-
The economics of ribosome biosynthesis in yeast
-
Warner, J.R. The economics of ribosome biosynthesis in yeast. Trends Biochem. Sci., 1999, 24(11): p. 437-440.
-
(1999)
Trends Biochem. Sci.
, vol.24
, Issue.11
, pp. 437-440
-
-
Warner, J.R.1
-
120
-
-
10044273627
-
Genome sequence of Haloarcula marismortui-a halophilic archaeon from the Dead Sea
-
in press
-
Baliga, N.S., Bonneau, R., Facciotti, M., Deutsch, E., Glusman, G., Shannon, P., Date, S., Marcotte, E., Hood, L. and Ng, W. Genome sequence of Haloarcula marismortui-a halophilic archaeon from the Dead Sea. 2004, in press.
-
(2004)
-
-
Baliga, N.S.1
Bonneau, R.2
Facciotti, M.3
Deutsch, E.4
Glusman, G.5
Shannon, P.6
Date, S.7
Marcotte, E.8
Hood, L.9
Ng, W.10
-
121
-
-
2942718723
-
Control of stochasticity in eukaryotic gene expression
-
Raser, J.M. and O'shea, E.K. Control of stochasticity in eukaryotic gene expression. Science, 2004, 304(5678): p. 1811-1814.
-
(2004)
Science
, vol.304
, Issue.5678
, pp. 1811-1814
-
-
Raser, J.M.1
O'shea, E.K.2
-
122
-
-
0037119587
-
Stochastic gene expression in a single cell
-
Elowitz, M.B,, Levine, A.J., Siggia, E.D. and Swain, P.S. Stochastic gene expression in a single cell. Science, 2002, 297(5584): p. 1193-1186.
-
(2002)
Science
, vol.297
, Issue.5584
, pp. 1186-1193
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
123
-
-
0028806048
-
Quantitative monitoring of gene expression patterns with a complementary DNA microarray
-
Schena, M., Shalon, D., Davis, R.W. and Brown, P.O. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science, 1995, 270(5235 ): p. 467-470.
-
(1995)
Science
, vol.270
, Issue.5235
, pp. 467-470
-
-
Schena, M.1
Shalon, D.2
Davis, R.W.3
Brown, P.O.4
-
124
-
-
0032875697
-
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
-
Gygi, S.P., Rist, B., Gerber, S.A., Turecek, F., Gelb, M.H. and Aebersold, R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol., 1999, 17 10): p. 994-999.
-
(1999)
Nat. Biotechnol.
, vol.17
, Issue.10
, pp. 994-999
-
-
Gygi, S.P.1
Rist, B.2
Gerber, S.A.3
Turecek, F.4
Gelb, M.H.5
Aebersold, R.6
-
125
-
-
0016711037
-
High resolution two-dimensional electrophoresis of proteins
-
O'farrell, P.H. High resolution two-dimensional electrophoresis of proteins. J. Biol Chem, 1975, 250(10): p. 4007-4021.
-
(1975)
J. Biol. Chem.
, vol.250
, Issue.10
, pp. 4007-4021
-
-
O'Farrell, P.H.1
-
126
-
-
0142040405
-
Metabolomics in systems biology
-
Weckwerth, W., Metabolomics in systems biology. Annu. Rev. Plant Biol., 2003, 54: p. 669-689.
-
(2003)
Annu. Rev. Plant Biol.
, vol.54
, pp. 669-689
-
-
Weckwerth, W.1
-
127
-
-
0036198435
-
Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae
-
Ficarro, S.B., Mccleland, M.L., Stukenberg, P.T., Burke, D.J., Ross, M.M., Shabanowitz, J., Hunt, D.F. and White, F.M. Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae. Nat. Biotechnol., 2002, 20(3 : p. 301-305.
-
(2002)
Nat. Biotechnol.
, vol.20
, Issue.3
, pp. 301-305
-
-
Ficarro, S.B.1
Mccleland, M.L.2
Stukenberg, P.T.3
Burke, D.J.4
Ross, M.M.5
Shabanowitz, J.6
Hunt, D.F.7
White, F.M.8
-
128
-
-
0034704248
-
Genomewide location and function of DNA binding proteins
-
Ren, B., Robert, F., Wyrick, J.J., Aparicio, O., Jennings, E.G., Simon, I., Zeitlinger, J., Schreiber, J., Hannett, N., Kanin, E., Volkert, T.L., Wilson, C.J., Bell, S.P. and Young, R.A. Genomewide location and function of DNA binding proteins. Science, 2000, 290(5500): p. 2306-2309.
-
(2000)
Science
, vol.290
, Issue.5500
, pp. 2306-2309
-
-
Ren, B.1
Robert, F.2
Wyrick, J.J.3
Aparicio, O.4
Jennings, E.G.5
Simon, I.6
Zeitlinger, J.7
Schreiber, J.8
Hannett, N.9
Kanin, E.10
Volkert, T.L.11
Wilson, C.J.12
Bell, S.P.13
Young, R.A.14
-
129
-
-
0037370399
-
The study of macromolecular complexes by quantitative proteomics
-
Ranish, J.A., Yi, E.C., Leslie, D.M., Purvine, S.O., Goodlett, D.R., Eng, J. and Aebersold, R. The study of macromolecular complexes by quantitative proteomics. Nat. Genet., 2003, 33 3): p. 349-355.
-
(2003)
Nat. Genet.
, vol.33
, Issue.3
, pp. 349-355
-
-
Ranish, J.A.1
Yi, E.C.2
Leslie, D.M.3
Purvine, S.O.4
Goodlett, D.R.5
Eng, J.6
Aebersold, R.7
-
130
-
-
0037050004
-
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
Ho, Y., Gruhler, A., Heilbut, A., Bader, G.D., Moore, L., Adams, S.L., Millar, A., Taylor, P., Bennett, K., Boutilier, K., Yang, L., Wolting, C., Donaldson, I., Schandorff, S., Shewnarane, J., Vo, M., Taggart, J., Goudreault, M., Muskat, B., Alfarano, C., Dewar, D., Lin, Z., Michalickova, K., Willems, A.R., Sassi, H., Nielsen, P.A., Rasmussen, K.J., Andersen, J.R., Johansen, L.E., Hansen, L.H., Jespersen, H., Podtelejnikov, A., Nielsen, F., Crawford, J., Poulsen, V., Sorensen, B.D., Matthiesen, J., Hendrickson, R.C., Gleeson, F., Pawson, T., Moran, M.F., Durocher, D., Mann, M., Hogue, C.W., Figeys, D. and Tyers, M. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature, 2002, 415(6868): p. 180-183.
-
(2002)
Nature
, vol.415
, Issue.6868
, pp. 180-183
-
-
Ho, Y.1
Gruhler, A.2
Heilbut, A.3
Bader, G.D.4
Moore, L.5
Adams, S.L.6
Millar, A.7
Taylor, P.8
Bennett, K.9
Boutilier, K.10
Yang, L.11
Wolting, C.12
Donaldson, I.13
Schandorff, S.14
Shewnarane, J.15
Vo, M.16
Taggart, J.17
Goudreault, M.18
Muskat, B.19
Alfarano, C.20
Dewar, D.21
Lin, Z.22
Michalickova, K.23
Willems, A.R.24
Sassi, H.25
Nielsen, P.A.26
Rasmussen, K.J.27
Andersen, J.R.28
Johansen, L.E.29
Hansen, L.H.30
Jespersen, H.31
Podtelejnikov, A.32
Nielsen, F.33
Crawford, J.34
Poulsen, V.35
Sorensen, B.D.36
Matthiesen, J.37
Hendrickson, R.C.38
Gleeson, F.39
Pawson, T.40
Moran, M.F.41
Durocher, D.42
Mann, M.43
Hogue, C.W.44
Figeys, D.45
Tyers, M.46
more..
-
131
-
-
0035836765
-
A comprehensive two-hybrid analysis to explore the yeast protein interactome
-
Ito, T., Chiba, T., Ozawa, R., Yoshida, M., Hattori, M. and Sakaki, Y. A comprehensive two-hybrid analysis to explore the yeast protein interactome. Proc. Natl. Acad. Sci. USA, 2001, 98 8): p. 4569-4574.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, Issue.8
, pp. 4569-4574
-
-
Ito, T.1
Chiba, T.2
Ozawa, R.3
Yoshida, M.4
Hattori, M.5
Sakaki, Y.6
-
132
-
-
0025940629
-
The two-hybrid system: A method to identify and clone genes for proteins that interact with a protein of interest
-
Chien, C.T., Bartel, P.L., Sternglanz, R. and Fields, S. The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest. Proc. Natl. Acad. Sci. USA, 1991, 88(21): p. 9578-9582.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, Issue.21
, pp. 9578-9582
-
-
Chien, C.T.1
Bartel, P.L.2
Sternglanz, R.3
Fields, S.4
|