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Volumn 4, Issue 10, 2003, Pages

An integrated database of genes responsive to the Myc oncogenic transcription factor: identification of direct genomic targets

Author keywords

Chromatin Immunoprecipitation; DDX18 Gene; Direct Target Gene; Phylogenetic Footprinting; Putative Target Gene

Indexed keywords

MESSENGER RNA; MYC PROTEIN; TRANSCRIPTION FACTOR;

EID: 0842278571     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2003-4-10-r69     Document Type: Article
Times cited : (421)

References (25)
  • 2
    • 0033551374 scopus 로고    scopus 로고
    • MYC oncogenes and human neoplastic disease
    • PID: 10378696, COI: 1:CAS:528:DyaK1MXjs12qtLg%3D
    • Nesbit CE, Tersak JM, Prochownik EV: MYC oncogenes and human neoplastic disease. Oncogene. 1999, 18: 3004-3016. 10.1038/sj.onc.1202746. DOI: 10.1038/sj.onc.1202746
    • (1999) Oncogene , vol.18 , pp. 3004-3016
    • Nesbit, C.E.1    Tersak, J.M.2    Prochownik, E.V.3
  • 3
    • 0027327313 scopus 로고
    • Binding of Myc proteins to canonical and noncanonical DNA sequences
    • PID: 8395000, COI: 1:CAS:528:DyaK3sXms1CjsL8%3D
    • Blackwell TK, Huang J, Ma A, Kretzner L, Alt FW, Eisenman RN, Weintraub H: Binding of Myc proteins to canonical and noncanonical DNA sequences. Mol Cell Biol. 1993, 13: 5216-5224. DOI: 10.1128/MCB.13.9.5216
    • (1993) Mol Cell Biol , vol.13 , pp. 5216-5224
    • Blackwell, T.K.1    Huang, J.2    Ma, A.3    Kretzner, L.4    Alt, F.W.5    Eisenman, R.N.6    Weintraub, H.7
  • 4
    • 0037197962 scopus 로고    scopus 로고
    • Characterization of the c-MYC-regulated transcriptome by SAGE: identification and analysis of c-MYC target genes
    • PID: 11983916, COI: 1:CAS:528:DC%2BD38XjslWnsbs%3D
    • Menssen A, Hermeking H: Characterization of the c-MYC-regulated transcriptome by SAGE: identification and analysis of c-MYC target genes. Proc Natl Acad Sci USA. 2002, 99: 6274-6279. 10.1073/pnas.082005599. DOI: 10.1073/pnas.082005599
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 6274-6279
    • Menssen, A.1    Hermeking, H.2
  • 5
    • 0034724389 scopus 로고    scopus 로고
    • Expression analysis with oligonucleotide microarrays reveals that MYC regulates genes involved in growth, cell cycle, signaling, and adhesion
    • PID: 10737792, COI: 1:CAS:528:DC%2BD3cXitlWqsL0%3D
    • Coller HA, Grandori C, Tamayo P, Colbert T, Lander ES, Eisenman RN, Golub TR: Expression analysis with oligonucleotide microarrays reveals that MYC regulates genes involved in growth, cell cycle, signaling, and adhesion. Proc Natl Acad Sci USA. 2000, 97: 3260-3265. 10.1073/pnas.97.7.3260. DOI: 10.1073/pnas.97.7.3260
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 3260-3265
    • Coller, H.A.1    Grandori, C.2    Tamayo, P.3    Colbert, T.4    Lander, E.S.5    Eisenman, R.N.6    Golub, T.R.7
  • 6
    • 0030794277 scopus 로고    scopus 로고
    • Identification of putative c-Myc responsive genes: characterization of rcl, a novel growth related gene
    • PID: 9271375, COI: 1:CAS:528:DyaK2sXlslarsLk%3D
    • Lewis B, Shim H, Li Q, Wu C, Lee L, Maity A, Dang C: Identification of putative c-Myc responsive genes: characterization of rcl, a novel growth related gene. Mol Cell Biol. 1997, 17: 4967-4978. DOI: 10.1128/MCB.17.9.4967
    • (1997) Mol Cell Biol , vol.17 , pp. 4967-4978
    • Lewis, B.1    Shim, H.2    Li, Q.3    Wu, C.4    Lee, L.5    Maity, A.6    Dang, C.7
  • 7
    • 0035881472 scopus 로고    scopus 로고
    • Binding of c-Myc to chromatin mediates mitogen-induced acetylation of histone H4 and gene activation
    • PID: 11511539, COI: 1:CAS:528:DC%2BD3MXmt1ajsL0%3D
    • Frank SR, Schroeder M, Fernandez P, Taubert S, Amati B: Binding of c-Myc to chromatin mediates mitogen-induced acetylation of histone H4 and gene activation. Genes Dev. 2001, 15: 2069-2082. 10.1101/gad.906601. DOI: 10.1101/gad.906601
    • (2001) Genes Dev , vol.15 , pp. 2069-2082
    • Frank, S.R.1    Schroeder, M.2    Fernandez, P.3    Taubert, S.4    Amati, B.5
  • 8
    • 0038641867 scopus 로고    scopus 로고
    • A strategy for identifying transcription factor binding sites reveals two classes of genomic c-Myc target sites
    • PID: 12702757, COI: 1:CAS:528:DC%2BD3sXjs1yit7w%3D
    • Haggerty TJ, Zeller KI, Osthus RC, Wonsey DR, Dang CV: A strategy for identifying transcription factor binding sites reveals two classes of genomic c-Myc target sites. Proc Natl Acad Sci USA. 2003, 100: 5313-5318. 10.1073/pnas.0931346100. DOI: 10.1073/pnas.0931346100
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 5313-5318
    • Haggerty, T.J.1    Zeller, K.I.2    Osthus, R.C.3    Wonsey, D.R.4    Dang, C.V.5
  • 9
    • 78049250194 scopus 로고    scopus 로고
    • Myc Cancer Gene. [http://www.myccancergene.org/site/about.asp]
    • Myc Cancer Gene.
  • 10
    • 85182636241 scopus 로고    scopus 로고
    • LocusLink. [http://www.ncbi.nlm.nih.gov/LocusLink/]
    • Locuslink.
  • 12
    • 85182700001 scopus 로고    scopus 로고
    • PubMed
    • PubMed. [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed]
  • 13
    • 0024396222 scopus 로고
    • Chimaeras of myc oncoprotein and steroid receptors cause hormone-dependent transformation of cells
    • PID: 2662015, COI: 1:CAS:528:DyaL1MXltFSisLg%3D
    • Eilers M, Picard D, Yamamoto K, Bishop J: Chimaeras of myc oncoprotein and steroid receptors cause hormone-dependent transformation of cells. Nature. 1989, 340: 66-68. 10.1038/340066a0. DOI: 10.1038/340066a0
    • (1989) Nature , vol.340 , pp. 66-68
    • Eilers, M.1    Picard, D.2    Yamamoto, K.3    Bishop, J.4
  • 14
    • 0030849451 scopus 로고    scopus 로고
    • Phenotypes of c-Myc-deficient rat fibroblasts isolated by targeted homologous recombination
    • PID: 9342182, COI: 1:CAS:528:DyaK2sXmvVWjtbk%3D
    • Mateyak MK, Obaya AJ, Adachi S, Sedivy JM: Phenotypes of c-Myc-deficient rat fibroblasts isolated by targeted homologous recombination. Cell Growth Differ. 1997, 8: 1039-1048.
    • (1997) Cell Growth Differ , vol.8 , pp. 1039-1048
    • Mateyak, M.K.1    Obaya, A.J.2    Adachi, S.3    Sedivy, J.M.4
  • 15
    • 0038492517 scopus 로고    scopus 로고
    • A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells
    • PID: 12808131, COI: 1:CAS:528:DC%2BD3sXlsFGnsL0%3D
    • Li Z, Van Calcar S, Qu C, Cavenee WK, Zhang MQ, Ren B: A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells. Proc Natl Acad Sci USA. 2003, 100: 8164-8169. 10.1073/pnas.1332764100. DOI: 10.1073/pnas.1332764100
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 8164-8169
    • Li, Z.1    Van Calcar, S.2    Qu, C.3    Cavenee, W.K.4    Zhang, M.Q.5    Ren, B.6
  • 17
    • 0035930544 scopus 로고    scopus 로고
    • Characterization of nucleophosmin (B23) as a Myc target by scanning chromatin immunoprecipitation
    • PID: 11604407, COI: 1:CAS:528:DC%2BD38XltVGg
    • Zeller KI, Haggerty TJ, Barrett JF, Guo Q, Wonsey DR, Dang CV: Characterization of nucleophosmin (B23) as a Myc target by scanning chromatin immunoprecipitation. J Biol Chem. 2001, 276: 48285-48291.
    • (2001) J Biol Chem , vol.276 , pp. 48285-48291
    • Zeller, K.I.1    Haggerty, T.J.2    Barrett, J.F.3    Guo, Q.4    Wonsey, D.R.5    Dang, C.V.6
  • 20
    • 0037718341 scopus 로고    scopus 로고
    • Analysis of Myc bound loci identified by CpG island arrays shows that Max is essential for Myc-dependent repression
    • PID: 12747840, COI: 1:CAS:528:DC%2BD3sXjvFamtrk%3D
    • Mao DY, Watson JD, Yan PS, Barsyte-Lovejoy D, Khosravi F, Wong WW, Farnham PJ, Huang TH, Penn LZ: Analysis of Myc bound loci identified by CpG island arrays shows that Max is essential for Myc-dependent repression. Curr Biol. 2003, 13: 882-886. 10.1016/S0960-9822(03)00297-5. DOI: 10.1016/S0960-9822(03)00297-5
    • (2003) Curr Biol , vol.13 , pp. 882-886
    • Mao, D.Y.1    Watson, J.D.2    Yan, P.S.3    Barsyte-Lovejoy, D.4    Khosravi, F.5    Wong, W.W.6    Farnham, P.J.7    Huang, T.H.8    Penn, L.Z.9
  • 21
    • 0029757618 scopus 로고    scopus 로고
    • Myc-Max heterodimers activate a DEAD box gene and interact with multiple E box-related sites in vivo
    • PID: 8861962, COI: 1:CAS:528:DyaK28Xmt1Krs7s%3D
    • Grandori C, Mac J, Siebelt F, Ayer D, Eisenman R: Myc-Max heterodimers activate a DEAD box gene and interact with multiple E box-related sites in vivo. EMBO J. 1996, 15: 4344-4357.
    • (1996) EMBO J , vol.15 , pp. 4344-4357
    • Grandori, C.1    Mac, J.2    Siebelt, F.3    Ayer, D.4    Eisenman, R.5
  • 22
    • 0029779280 scopus 로고    scopus 로고
    • Cdc25 cell cycle phosphatase as a target of c-myc
    • PID: 8700224, COI: 1:CAS:528:DyaK28XkvFGjtrk%3D
    • Galaktionov K, Chen X, Beach D: Cdc25 cell cycle phosphatase as a target of c-myc. Nature. 1996, 382: 511-517. 10.1038/382511a0. DOI: 10.1038/382511a0
    • (1996) Nature , vol.382 , pp. 511-517
    • Galaktionov, K.1    Chen, X.2    Beach, D.3
  • 24
    • 0036739031 scopus 로고    scopus 로고
    • Detection and visualization of compositionally similar cis-regulatory element clusters in orthologous and coordinately controlled genes
    • PID: 12213778, COI: 1:CAS:528:DC%2BD38Xnt1eltr4%3D
    • Jegga AG, Sherwood SP, Carman JW, Pinski AT, Phillips JL, Pestian JP, Aronow BJ: Detection and visualization of compositionally similar cis-regulatory element clusters in orthologous and coordinately controlled genes. Genome Res. 2002, 12: 1408-1417. 10.1101/gr.255002. DOI: 10.1101/gr.255002
    • (2002) Genome Res , vol.12 , pp. 1408-1417
    • Jegga, A.G.1    Sherwood, S.P.2    Carman, J.W.3    Pinski, A.T.4    Phillips, J.L.5    Pestian, J.P.6    Aronow, B.J.7
  • 25
    • 0032506243 scopus 로고    scopus 로고
    • c-Myc target gene specificity is determined by a post-DNA binding mechanism
    • PID: 9811896, COI: 1:CAS:528:DyaK1cXnsVGhtb4%3D
    • Boyd KE, Wells J, Gutman J, Bartley SM, Farnham PJ: c-Myc target gene specificity is determined by a post-DNA binding mechanism. Proc Natl Acad Sci USA. 1998, 95: 13887-13892. 10.1073/pnas.95.23.13887. DOI: 10.1073/pnas.95.23.13887
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 13887-13892
    • Boyd, K.E.1    Wells, J.2    Gutman, J.3    Bartley, S.M.4    Farnham, P.J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.