-
1
-
-
0027955787
-
Biased Probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins
-
Abagyan, R.; Totrov, M. Biased Probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins. J. Mol. Biol. 1994, 235, 983-1002.
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 983-1002
-
-
Abagyan, R.1
Totrov, M.2
-
2
-
-
0028052661
-
-
Abseher, R.; Ludemann, S.; Schreiber, H.; Steinhauser, O. J, Am. Chem. Soc. 1994, 116, 4006-4018.
-
(1994)
J, Am. Chem. Soc.
, vol.116
, pp. 4006-4018
-
-
Abseher, R.1
Ludemann, S.2
Schreiber, H.3
Steinhauser, O.4
-
3
-
-
5144229966
-
Practical aspects of two-dimensional transverse NOE spectroscopy
-
Bax, A.; Davis, D. G. Practical aspects of two-dimensional transverse NOE spectroscopy. J. Magn. Reson. 1985, 63, 207-213.
-
(1985)
J. Magn. Reson.
, vol.63
, pp. 207-213
-
-
Bax, A.1
Davis, D.G.2
-
4
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization and dynamics calculations
-
Brooks, B. R.; Bruccoloeri, R. E.; Olafson, B. D.; States, D. J.; Swaminathan, S.; Karplus, M. CHARMM: a program for macromolecular energy, minimization and dynamics calculations. J. Comput. Chem. 1983, 4, 187-215.
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187-215
-
-
Brooks, B.R.1
Bruccoloeri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
5
-
-
0028793933
-
NMR analysis of molecular flexibility in solution: A new method for the study of complex distributions of rapidly exchanging conformations. Application to a 13-residue peptide with an 8-residue loop
-
Cicero, D. O.; Barbato, G.; Bazzo, R. NMR analysis of molecular flexibility in solution: a new method for the study of complex distributions of rapidly exchanging conformations. Application to a 13-residue peptide with an 8-residue loop. J. Am. Chem. Soc. 1995, 117, 1027-1033.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 1027-1033
-
-
Cicero, D.O.1
Barbato, G.2
Bazzo, R.3
-
6
-
-
0026768829
-
Folding of peptide fragments comprising the complete sequence of proteins
-
Dyson, H. J.; Merutka, G.; Waltho, J.; Lerner, R.; Wright, P. Folding of peptide fragments comprising the complete sequence of proteins. J. Mol. Biol. 1992, 226, 795-817.
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 795-817
-
-
Dyson, H.J.1
Merutka, G.2
Waltho, J.3
Lerner, R.4
Wright, P.5
-
7
-
-
0027472122
-
Structures of sweet and bitter peptide diastereomers by NMR, computer simulations and X-ray crystallography
-
Goodman, M.; Yamazaki, T.; Zhu, Y. F.; Benedetti, E.; Chadha, R. K. Structures of sweet and bitter peptide diastereomers by NMR, computer simulations and X-ray crystallography. J. Am. Chem. Soc. 1993, 115, 428-432.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 428-432
-
-
Goodman, M.1
Yamazaki, T.2
Zhu, Y.F.3
Benedetti, E.4
Chadha, R.K.5
-
8
-
-
84990113699
-
Two-dimensional NMR spectroscopy: Background and overview of the experiments
-
Kessler, H.; Gehrke, M.; Griesinger, C. Two-dimensional NMR spectroscopy: background and overview of the experiments. Angew. Chem., Int. Ed. Engl. 1988, 27, 490-536.
-
(1988)
Angew. Chem., Int. Ed. Engl.
, vol.27
, pp. 490-536
-
-
Kessler, H.1
Gehrke, M.2
Griesinger, C.3
-
9
-
-
0011828339
-
Relayed-NOE experiments in the rotating frame for sequence analysis of peptides
-
Kessler, H.; Gemmecker, G.; Haase, B. Relayed-NOE experiments in the rotating frame for sequence analysis of peptides. J. Magn. Reson. 1988b, 77, 401-408.
-
(1988)
J. Magn. Reson.
, vol.77
, pp. 401-408
-
-
Kessler, H.1
Gemmecker, G.2
Haase, B.3
-
10
-
-
0000176331
-
The contribution of peptides and amino acids to the taste of foodstuffs
-
Kirimura, J.; Shimizu, A.; Kimizuka, A.; Ninimiya, T.; Katsuya, N. The contribution of peptides and amino acids to the taste of foodstuffs. J. Agric. Food Chem. 1969, 17, 689-695.
-
(1969)
J. Agric. Food Chem.
, vol.17
, pp. 689-695
-
-
Kirimura, J.1
Shimizu, A.2
Kimizuka, A.3
Ninimiya, T.4
Katsuya, N.5
-
11
-
-
0000457461
-
Elucidation of solution structures by conformer population analysis of NOE data
-
Landis, C.; Allured, V. S. Elucidation of solution structures by conformer population analysis of NOE data. J. Am. Chem. Soc. 1991b, 113, 9493-9499.
-
(1991)
J. Am. Chem. Soc.
, vol.113
, pp. 9493-9499
-
-
Landis, C.1
Allured, V.S.2
-
12
-
-
0001138738
-
Bitter flavour in dairy products. IL A review of bitter peptides from caseins: Their formation, isolation and identification, structure masking and inhibition
-
Lemieux, L.; Simard, R. E. Bitter flavour in dairy products. IL A review of bitter peptides from caseins: their formation, isolation and identification, structure masking and inhibition. Lait 1992, 72, 335-382.
-
(1992)
Lait
, vol.72
, pp. 335-382
-
-
Lemieux, L.1
Simard, R.E.2
-
13
-
-
0023430366
-
Monte Carlo-minimization approach to the multiple-minima problem in protein folding
-
Li, Z.; Scheraga, H. A. Monte Carlo-minimization approach to the multiple-minima problem in protein folding. Proc. Natl. Acad. Sci U.S.A. 1987, 84, 6611-6615.
-
(1987)
Proc. Natl. Acad. Sci U.S.A.
, vol.84
, pp. 6611-6615
-
-
Li, Z.1
Scheraga, H.A.2
-
14
-
-
0028026122
-
Peptide flexibility and calculations of an ensemble of molecules
-
Mierke, D. F.; Kurz, M.; Kessler, H. Peptide flexibility and calculations of an ensemble of molecules. J. Am. Chem. Soc. 1994, 116, 1042-1049.
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 1042-1049
-
-
Mierke, D.F.1
Kurz, M.2
Kessler, H.3
-
15
-
-
0025690309
-
Situations of gamma-turns in proteins
-
Milner-White, E. J. Situations of gamma-turns in proteins. J. Mol. Biol. 1990, 216, 385-397.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 385-397
-
-
Milner-White, E.J.1
-
16
-
-
0002934042
-
Do we recognize sweetness and bitterness at the same receptor?
-
Nakamura, K.; Okai, H. Do we recognize sweetness and bitterness at the same receptor? ACS Symp. Ser. 1993, 528, 28-35.
-
(1993)
ACS Symp. Ser.
, vol.528
, pp. 28-35
-
-
Nakamura, K.1
Okai, H.2
-
17
-
-
0029283086
-
Role of basic and acidic fragments in delicious peptides (Lys-Gly-Asp-Glu-Glu-Ser-Leu-Ala) and the taste behavior of sodium and potassium salts in acidic oligopeptides
-
Nakata, T.; Takahashi, M.; Nakatani, M.; Kuramitsu, R.; Tamura, M.; Okai, H. Role of basic and acidic fragments in delicious peptides (Lys-Gly-Asp-Glu-Glu-Ser-Leu-Ala) and the taste behavior of sodium and potassium salts in acidic oligopeptides. Biosci., Biotechnol., Biochem. 1995, 59, 689-693.
-
(1995)
Biosci., Biotechnol., Biochem.
, vol.59
, pp. 689-693
-
-
Nakata, T.1
Takahashi, M.2
Nakatani, M.3
Kuramitsu, R.4
Tamura, M.5
Okai, H.6
-
18
-
-
0000545402
-
A comparative study of the simulated-annealing and Monte Carlo-with minimization approaches to the minimum-energy structures of polypeptides: [Met]-enkephalin
-
Nayeem, A.; Vila, J.; Scheraga, H. A. A comparative study of the simulated-annealing and Monte Carlo-with minimization approaches to the minimum-energy structures of polypeptides: [Met]-enkephalin. J. Comput. Chem. 1991, 12, 594-605.
-
(1991)
J. Comput. Chem.
, vol.12
, pp. 594-605
-
-
Nayeem, A.1
Vila, J.2
Scheraga, H.A.3
-
19
-
-
0027266891
-
Conformations of the dermenkephalin backbone in DMSO solution by a new approach to the solution conformations of flexible peptides
-
Nikiforovich, G. V.; Prakash, O.; Gehdrig, C. A.; Hruby, V. J. Conformations of the dermenkephalin backbone in DMSO solution by a new approach to the solution conformations of flexible peptides. J. Am. Chem. Soc. 1993, 115, 3399-3406.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 3399-3406
-
-
Nikiforovich, G.V.1
Prakash, O.2
Gehdrig, C.A.3
Hruby, V.J.4
-
20
-
-
0041453803
-
Molecular design of inverted aspartame-type sweeteners
-
Nosho, Y.; Seki, T.; Kondo, M.; Ohfuji, T.; Tamura, M.; Okai, H. Molecular design of inverted aspartame-type sweeteners. J. Agric. Food Chem. 1990, 38, 1368-1373.
-
(1990)
J. Agric. Food Chem.
, vol.38
, pp. 1368-1373
-
-
Nosho, Y.1
Seki, T.2
Kondo, M.3
Ohfuji, T.4
Tamura, M.5
Okai, H.6
-
21
-
-
0026752259
-
Quenched molecular dynamics simulations of tuftsin and proposed cyclic analogues
-
O'Connor, S. D.; Smith, P. E.; Al-Obeidi, F.; Pettit, B. M. Quenched molecular dynamics simulations of tuftsin and proposed cyclic analogues. J. Med. Chem. 1992, 35, 2870-2881.
-
(1992)
J. Med. Chem.
, vol.35
, pp. 2870-2881
-
-
O'Connor, S.D.1
Smith, P.E.2
Al-Obeidi, F.3
Pettit, B.M.4
-
22
-
-
0024472052
-
1H NMR studies of the solution conformations of an analogue of the C-peptide of ribonuclease A
-
1H NMR studies of the solution conformations of an analogue of the C-peptide of ribonuclease A. Biochemistry 1989, 28, 7059-7064.
-
(1989)
Biochemistry
, vol.28
, pp. 7059-7064
-
-
Osterhout, J.J.1
Baldwin, R.L.2
York, E.J.3
Steward, J.M.4
Dyson, H.J.5
Wright, P.E.6
-
23
-
-
0026847070
-
Characterization of lowenergy conformational domains for Met-enkephalin
-
Ferez, J. J.; Villar, H. O.; Loew, G. H. Characterization of lowenergy conformational domains for Met-enkephalin. J. Comput.-Aided Mol. Des. 1992, 6, 175-190.
-
(1992)
J. Comput.-Aided Mol. Des.
, vol.6
, pp. 175-190
-
-
Ferez, J.J.1
Villar, H.O.2
Loew, G.H.3
-
24
-
-
0000603111
-
Conformational analysis of bradykinin by annealed molecular dynamics and comparison to NMR-derived conformations
-
Salvino, J. M.; Seoane, P. R.; Dolle, R. E. Conformational analysis of bradykinin by annealed molecular dynamics and comparison to NMR-derived conformations. J. Comput. Chem. 1993, 14, 438-444.
-
(1993)
J. Comput. Chem.
, vol.14
, pp. 438-444
-
-
Salvino, J.M.1
Seoane, P.R.2
Dolle, R.E.3
-
25
-
-
0027378408
-
Molecular dynamics simulation of the proline conformational equilibrium and dynamics in antamanide using the CHARMM force field
-
Schmidt, J. M.; Bruschweiler, R.; Ernst, R. R.; Dunbrack, R. L.; Joseph, D.; Karplus, M. Molecular dynamics simulation of the proline conformational equilibrium and dynamics in antamanide using the CHARMM force field. J. Am. Chem. Soc. 1993, 115, 8747-8756.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 8747-8756
-
-
Schmidt, J.M.1
Bruschweiler, R.2
Ernst, R.R.3
Dunbrack, R.L.4
Joseph, D.5
Karplus, M.6
-
26
-
-
0024391832
-
Conformation of β-hairpins in protein structures
-
Sibanda, B. L.; Blundell, T. L.; Thornton, J. M. Conformation of β-hairpins in protein structures. J. Mol. Biol. 1989, 206, 759-777.
-
(1989)
J. Mol. Biol.
, vol.206
, pp. 759-777
-
-
Sibanda, B.L.1
Blundell, T.L.2
Thornton, J.M.3
-
27
-
-
0025974617
-
Simulation of the structure and dynamics of the bis(penicillamine) enkephalin zwitterion
-
Smith, P. E.; Dang, L. X.; Pettitt, B. M. Simulation of the structure and dynamics of the bis(penicillamine) enkephalin zwitterion. J Am. Chem. Soc. 1991, 113, 67-73.
-
(1991)
J Am. Chem. Soc.
, vol.113
, pp. 67-73
-
-
Smith, P.E.1
Dang, L.X.2
Pettitt, B.M.3
-
28
-
-
0011268757
-
Role of proteins and peptides in meat flavor
-
Spanier, A. M.; Miller, J. A. Role of proteins and peptides in meat flavor. ACS Symp. Ser. 1993, No. 528, 78-97.
-
(1993)
ACS Symp. Ser.
, vol.528
, pp. 78-97
-
-
Spanier, A.M.1
Miller, J.A.2
-
30
-
-
0007203787
-
L-Ornithyltaurine, a new salty peptide
-
Tada, M.; Shinoda, I; Okai, H. J. L-Ornithyltaurine, a new salty peptide. J. Agric. Food Chem. 1984, 32, 992-996.
-
(1984)
J. Agric. Food Chem.
, vol.32
, pp. 992-996
-
-
Tada, M.1
Shinoda, I.2
Okai, H.J.3
-
31
-
-
0040231105
-
The relationship between taste and primary structure of 'Delicious Peptide' (Lys-Gly-Asp-Glu-Glu-Ser-Leu-Ala) from beef soup
-
Tamura, M.; Nakatsuka, T.; Tada, M.; Kawasaki, Y.; Kikuchi, E.; Okai, H. The relationship between taste and primary structure of 'Delicious Peptide' (Lys-Gly-Asp-Glu-Glu-Ser-Leu-Ala) from beef soup. Agric. Biol. Chem. 1989, 53, 319-325.
-
(1989)
Agric. Biol. Chem.
, vol.53
, pp. 319-325
-
-
Tamura, M.1
Nakatsuka, T.2
Tada, M.3
Kawasaki, Y.4
Kikuchi, E.5
Okai, H.6
-
32
-
-
2142813682
-
Computer simulation of molecular dynamics: Methodology, applications and perspectives in chemistry
-
van Gunsteren, W. F.; Berendsen, H. J. C. Computer simulation of molecular dynamics: methodology, applications and perspectives in chemistry. Angew. Chem., Int. Ed. Engl. 1990, 29, 992-1023.
-
(1990)
Angew. Chem., Int. Ed. Engl.
, vol.29
, pp. 992-1023
-
-
Van Gunsteren, W.F.1
Berendsen, H.J.C.2
-
33
-
-
0001290941
-
Conformational energy calculations on polypeptides and proteins
-
Vasquez, M.; Nemethy, G.; Scheraga, H. A. Conformational energy calculations on polypeptides and proteins. Chem. Rev, 1994, 94, 2183-2239.
-
(1994)
Chem. Rev
, vol.94
, pp. 2183-2239
-
-
Vasquez, M.1
Nemethy, G.2
Scheraga, H.A.3
-
34
-
-
0001413092
-
Conformational distribution of heptaalanine: Analysis using a new Monte Carlo chain growth method
-
Velikson, B.; Garel, T.; Niel, J. C.; Orland, H.; Smith, J. C. Conformational distribution of heptaalanine: analysis using a new Monte Carlo chain growth method. J. Comput. Chem. 1992, 13, 1216-1233.
-
(1992)
J. Comput. Chem.
, vol.13
, pp. 1216-1233
-
-
Velikson, B.1
Garel, T.2
Niel, J.C.3
Orland, H.4
Smith, J.C.5
-
35
-
-
0024432271
-
Dynamics space structure of the Leu-enkephalin molecule in DMSO solution
-
Vesterman, B.; Saulitis, J.; Betins, J.; Liepins, E.; Nikiforovich, G. V. Dynamics space structure of the Leu-enkephalin molecule in DMSO solution. Biochim. Biophys. Acta 1989, 998, 204-209.
-
(1989)
Biochim. Biophys. Acta
, vol.998
, pp. 204-209
-
-
Vesterman, B.1
Saulitis, J.2
Betins, J.3
Liepins, E.4
Nikiforovich, G.V.5
-
38
-
-
0018130761
-
A peptide with delicious taste
-
Yamasaki, Y.; Maekawa, K. A peptide with delicious taste. Agric. Biol. Chem. 1978, 42, 1761-1765.
-
(1978)
Agric. Biol. Chem.
, vol.42
, pp. 1761-1765
-
-
Yamasaki, Y.1
Maekawa, K.2
|