메뉴 건너뛰기




Volumn 70, Issue 1, 2004, Pages 214-223

Within- and between-Lake Variability in the Composition of Bacterioplankton Communities: Investigations Using Multiple Spatial Scales

Author keywords

[No Author keywords available]

Indexed keywords

ECOSYSTEMS; LAKES; PH EFFECTS; SAMPLING;

EID: 0347130868     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.70.1.214-223.2004     Document Type: Article
Times cited : (154)

References (39)
  • 1
    • 0033864715 scopus 로고    scopus 로고
    • Seasonal and spatial community dynamics in the meromictic Lake Cadagno
    • Bosshard, P. P., R. Stettler, and R. Bachofen. 2000. Seasonal and spatial community dynamics in the meromictic Lake Cadagno. Arch. Microbiol. 174:168-174.
    • (2000) Arch. Microbiol. , vol.174 , pp. 168-174
    • Bosshard, P.P.1    Stettler, R.2    Bachofen, R.3
  • 3
    • 0035965093 scopus 로고    scopus 로고
    • Composition and temporal dynamics of planktonic archaeal assemblages from anaerobic sulfurous environments studied by 16S rDNA denaturing gradient gel electrophoresis and sequencing
    • Casamayor, E. O., G. Muyzer, and C. Pedros-Alio. 2001. Composition and temporal dynamics of planktonic archaeal assemblages from anaerobic sulfurous environments studied by 16S rDNA denaturing gradient gel electrophoresis and sequencing. Aquat. Microb. Ecol. 25:237-246.
    • (2001) Aquat. Microb. Ecol. , vol.25 , pp. 237-246
    • Casamayor, E.O.1    Muyzer, G.2    Pedros-Alio, C.3
  • 4
    • 17544390961 scopus 로고    scopus 로고
    • Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: Comparison by microscopy and denaturing gradient gel electrophoresis
    • Casamayor, E. O., H. Schafer, L. Baneras, C. Pedros-Alio, and G. Muyzer. 2000. Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 66:499-508.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 499-508
    • Casamayor, E.O.1    Schafer, H.2    Baneras, L.3    Pedros-Alio, C.4    Muyzer, G.5
  • 5
    • 0027804103 scopus 로고
    • Non-parametric multivariate analyses of changes in community structure
    • Clarke, K. R. 1993. Non-parametric multivariate analyses of changes in community structure. Aust. J. Ecol. 18:117-143.
    • (1993) Aust. J. Ecol. , vol.18 , pp. 117-143
    • Clarke, K.R.1
  • 6
    • 0000179967 scopus 로고
    • Statistical design and analysis for a 'biological effects' study
    • Clarke, K. R., and R. H. Green. 1988. Statistical design and analysis for a 'biological effects' study. Mar. Ecol. Prog. Ser. 46:213-226.
    • (1988) Mar. Ecol. Prog. Ser. , vol.46 , pp. 213-226
    • Clarke, K.R.1    Green, R.H.2
  • 7
    • 0002963220 scopus 로고
    • A practical strategy for analysing multispecies distribution patterns
    • Field, J. G., K. R. Clarke, and R. M. Warwick. 1982. A practical strategy for analysing multispecies distribution patterns. Mar. Ecol. Prog. Ser. 8:37-52.
    • (1982) Mar. Ecol. Prog. Ser. , vol.8 , pp. 37-52
    • Field, J.G.1    Clarke, K.R.2    Warwick, R.M.3
  • 8
    • 0032879764 scopus 로고    scopus 로고
    • Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities
    • Fisher, M. M., and E. W. Triplett. 1999. Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities. Appl. Environ. Microbiol. 65:4630-4636.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4630-4636
    • Fisher, M.M.1    Triplett, E.W.2
  • 9
    • 0032455041 scopus 로고    scopus 로고
    • Zooplanklon community responses during recovery from acidification in Little Rock Lake
    • Frost, T. M., P. K. Montz, and T. K. Kratz. 1998. Zooplanklon community responses during recovery from acidification in Little Rock Lake, Wisconsin. Restor. Ecol. 6:336-342.
    • (1998) Wisconsin. Restor. Ecol. , vol.6 , pp. 336-342
    • Frost, T.M.1    Montz, P.K.2    Kratz, T.K.3
  • 10
    • 0033754255 scopus 로고    scopus 로고
    • Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria
    • Glöckner, F. O., E. Zaichikov, N. Belkova, L. Denissova, J. Pernthaler, A. Pernthaler, and R. Amann. 2000. Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria. Appl. Environ. Microbiol. 66:5053-5065.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 5053-5065
    • Glöckner, F.O.1    Zaichikov, E.2    Belkova, N.3    Denissova, L.4    Pernthaler, J.5    Pernthaler, A.6    Amann, R.7
  • 11
    • 0030872627 scopus 로고    scopus 로고
    • Bacterial diversity in Adirondack Mountain lakes as revealed by 16S rRNA gene sequences
    • Hiorns, W. D., B. A. Methé, S. A. NierzwiekiBauer, and J. P. Zehr. 1997. Bacterial diversity in Adirondack Mountain lakes as revealed by 16S rRNA gene sequences. Appl. Environ. Microbiol. 63:2957-2960.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 2957-2960
    • Hiorns, W.D.1    Methé, B.A.2    NierzwiekiBauer, S.A.3    Zehr, J.P.4
  • 12
    • 0028983971 scopus 로고
    • Taxonomic diversity and metabolic-activity of microbial communities in the water column of the central Baltic Sea
    • Höfle, M. G., and I. Brettar. 1995. Taxonomic diversity and metabolic-activity of microbial communities in the water column of the central Baltic Sea. Limnol. Oceanogr. 40:868-874.
    • (1995) Limnol. Oceanogr. , vol.40 , pp. 868-874
    • Höfle, M.G.1    Brettar, I.2
  • 13
    • 0002002528 scopus 로고
    • A simplified Monte Carlo significance test procedure
    • Hope, A. C. A. 1968. A simplified Monte Carlo significance test procedure. J. R. Stat. Soc. Ser. B 30:582-598.
    • (1968) J. R. Stat. Soc. Ser. B , vol.30 , pp. 582-598
    • Hope, A.C.A.1
  • 14
    • 0037742699 scopus 로고    scopus 로고
    • Bacterial diversity patterns along a gradient of primary productivity
    • Horner-Devine, M. C., M. A. Leibold, V. H. Smith, and B. J. M. Bohannan. 2003. Bacterial diversity patterns along a gradient of primary productivity. Ecol. Lett. 6:613-622.
    • (2003) Ecol. Lett. , vol.6 , pp. 613-622
    • Horner-Devine, M.C.1    Leibold, M.A.2    Smith, V.H.3    Bohannan, B.J.M.4
  • 15
    • 0000383912 scopus 로고
    • Pseudoreplication and the design of ecological field experiments
    • Hurlbert, S. H. 1984. Pseudoreplication and the design of ecological field experiments. Ecol. Monogr. 54:187-211.
    • (1984) Ecol. Monogr. , vol.54 , pp. 187-211
    • Hurlbert, S.H.1
  • 16
    • 84982604709 scopus 로고
    • The effect of environmental factors in estimated viable and total populations of planktonic bacteria in lakes and experimental enclosures
    • Jones, J. G. 1977. The effect of environmental factors in estimated viable and total populations of planktonic bacteria in lakes and experimental enclosures. Freshwater Biol. 7:67-91.
    • (1977) Freshwater Biol. , vol.7 , pp. 67-91
    • Jones, J.G.1
  • 17
    • 84980216429 scopus 로고
    • Variability in microbiological data from a stratified eutrophic lake
    • Jones, J. G., and B. M. Simon. 1980. Variability in microbiological data from a stratified eutrophic lake. J. Appl. Bacteriol. 49:127-135.
    • (1980) J. Appl. Bacteriol. , vol.49 , pp. 127-135
    • Jones, J.G.1    Simon, B.M.2
  • 18
    • 0032875726 scopus 로고    scopus 로고
    • Bacterioplankton community diversity in a series of thermally stratified lakes
    • Konopka, A., T. Bercot, and C. Nakatsu. 1999. Bacterioplankton community diversity in a series of thermally stratified lakes. Microb. Ecol. 38:126-135.
    • (1999) Microb. Ecol. , vol.38 , pp. 126-135
    • Konopka, A.1    Bercot, T.2    Nakatsu, C.3
  • 19
    • 0031837675 scopus 로고    scopus 로고
    • Nanoscale patchiness of bacteria in lake water studied with the spatial information preservation method
    • Krembs, C., A. R. Juhl, R. A. Long, and F. Azam. 1998. Nanoscale patchiness of bacteria in lake water studied with the spatial information preservation method. Limnol. Oceanogr. 43:307-314.
    • (1998) Limnol. Oceanogr. , vol.43 , pp. 307-314
    • Krembs, C.1    Juhl, A.R.2    Long, R.A.3    Azam, F.4
  • 20
    • 0041654220 scopus 로고
    • Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis
    • Kruskal, J. B. 1964. Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis. Psychometrika 29:1-27.
    • (1964) Psychometrika , vol.29 , pp. 1-27
    • Kruskal, J.B.1
  • 22
    • 0033784725 scopus 로고    scopus 로고
    • Bacterioplankton community composition in five lakes differing in trophic status and humic content
    • Lindström, E. S. 2000. Bacterioplankton community composition in five lakes differing in trophic status and humic content. Microb. Ecol. 40:104-113.
    • (2000) Microb. Ecol. , vol.40 , pp. 104-113
    • Lindström, E.S.1
  • 23
    • 0035678759 scopus 로고    scopus 로고
    • Investigating influential factors on bacterioplankton community composition: Results from a field study of five mesotrophic lakes
    • Lindström, E. S. 2001. Investigating influential factors on bacterioplankton community composition: results from a field study of five mesotrophic lakes. Microb. Ecol. 42:598-605.
    • (2001) Microb. Ecol. , vol.42 , pp. 598-605
    • Lindström, E.S.1
  • 24
    • 0036635079 scopus 로고    scopus 로고
    • Do neighboring lakes share common taxa of bacterioplankton? Comparison of the 16S rDNA fingerprints and sequences from three geographic regions
    • Lindström, E. S., and E. Leskinen. 2002. Do neighboring lakes share common taxa of bacterioplankton? Comparison of the 16S rDNA fingerprints and sequences from three geographic regions. Microb. Ecol. 44:1-9.
    • (2002) Microb. Ecol. , vol.44 , pp. 1-9
    • Lindström, E.S.1    Leskinen, E.2
  • 28
    • 0033133461 scopus 로고    scopus 로고
    • Diversity, of bacterial communities in Adirondack lakes: Do species assemblages reflect lake water chemistry?
    • Methé, B. A., and J. P. Zehr. 1999. Diversity, of bacterial communities in Adirondack lakes: do species assemblages reflect lake water chemistry? Hydrobiologia 401:77-96.
    • (1999) Hydrobiologia , vol.401 , pp. 77-96
    • Methé, B.A.1    Zehr, J.P.2
  • 29
    • 0017081993 scopus 로고
    • Palchiness in the distribution of planktonic heterotrophic bacteria in lakes
    • Palmer, F. E., J. R. Methot, and J. T. Staley. 1976. Palchiness in the distribution of planktonic heterotrophic bacteria in lakes. Appl. Environ. Microbiol. 31:1003-1005.
    • (1976) Appl. Environ. Microbiol. , vol.31 , pp. 1003-1005
    • Palmer, F.E.1    Methot, J.R.2    Staley, J.T.3
  • 30
    • 0031711754 scopus 로고    scopus 로고
    • Bias in template-to-product ratios in multitemplate PCR
    • Polz, M. F., and C. M. Cavanaugh. 1998. Bias in template-to-product ratios in multitemplate PCR. App. Environ. Microbiol. 64:3724-3730.
    • (1998) App. Environ. Microbiol. , vol.64 , pp. 3724-3730
    • Polz, M.F.1    Cavanaugh, C.M.2
  • 31
    • 0031790538 scopus 로고    scopus 로고
    • Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity
    • Suzuki, M., M. S. Rappe, and S. J. Giovannoni. 1998. Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity. Appl. Environ. Microbiol. 64:4522-4529.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 4522-4529
    • Suzuki, M.1    Rappe, M.S.2    Giovannoni, S.J.3
  • 32
    • 0030067991 scopus 로고    scopus 로고
    • Bias caused by templale annealing in the amplification of mixtures of 16S rRNA genes by PCR
    • Suzuki, M. T., and S. J. Giovanonni. 1996. Bias caused by templale annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl. Environ. Microbiol. 62:625-630.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 625-630
    • Suzuki, M.T.1    Giovanonni, S.J.2
  • 34
    • 0035544053 scopus 로고    scopus 로고
    • Contrasting bacterioplankton community composition and seasonal dynamics in two neighbouring hypertrophic freshwater lakes
    • Van der Gucht, K., K. Sabbe, L. De Meester, N. Vloemans, G. Zwart, M. Gillis, and W. Vyverman. 2001. Contrasting bacterioplankton community composition and seasonal dynamics in two neighbouring hypertrophic freshwater lakes. Environ. Microbiol. 3:680-690.
    • (2001) Environ. Microbiol. , vol.3 , pp. 680-690
    • Van Der Gucht, K.1    Sabbe, K.2    De Meester, L.3    Vloemans, N.4    Zwart, G.5    Gillis, M.6    Vyverman, W.7
  • 35
    • 0033619833 scopus 로고    scopus 로고
    • Spectroradiometric identification of phototrophic microorganisms in planktonic aquatic environments
    • Vila, X., and C. A. Ahella. 1999. Spectroradiometric identification of phototrophic microorganisms in planktonic aquatic environments. Aquat. Microb. Ecol. 20:225-230.
    • (1999) Aquat. Microb. Ecol. , vol.20 , pp. 225-230
    • Vila, X.1    Ahella, C.A.2
  • 36
    • 0032030599 scopus 로고    scopus 로고
    • Vertical models of phototrophic bacterial distribution in the metalimnetic microbial communities of several freshwater North-American kettle lakes
    • Vila, X., C. A. Ahella, J. B. Figueras, and J. P. Hurley. 1998. Vertical models of phototrophic bacterial distribution in the metalimnetic microbial communities of several freshwater North-American kettle lakes. FEMS Microbiol. Ecol. 25:287-299.
    • (1998) FEMS Microbiol. Ecol. , vol.25 , pp. 287-299
    • Vila, X.1    Ahella, C.A.2    Figueras, J.B.3    Hurley, J.P.4
  • 37
    • 0345195995 scopus 로고    scopus 로고
    • Determination of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis
    • von Wintzingerode, F., U. B. Gobel, and E. Stackebrandt. 1997. Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. FEMS Microbiol. Rev. 21:213-229.
    • (1997) FEMS Microbiol. Rev. , vol.21 , pp. 213-229
    • Von Wintzingerode, F.1    Gobel, U.B.2    Stackebrandt, E.3
  • 38
    • 85066595524 scopus 로고    scopus 로고
    • Temporal patients in bacterial communities in three temperate lakes of different trophic status
    • in press
    • Yannarell, A. C., A. D. Kent, G. L. Lauster, T. K. Kratz, and E. W. Triplett. Temporal patients in bacterial communities in three temperate lakes of different trophic status. Microb. Ecol., in press.
    • Microb. Ecol.
    • Yannarell, A.C.1    Kent, A.D.2    Lauster, G.L.3    Kratz, T.K.4    Triplett, E.W.5
  • 39
    • 0032432257 scopus 로고    scopus 로고
    • Nearly identical 16S rRNA sequences recovered from lakes in North America and Europe indicate the existence of clades of globally distributed freshwater bacteria
    • Zwart, G., W. D. Hiorns, B. A. Methé, M. P. Van Agterveld, R. Huismans, S. C. Nold, J. P. Zehr, and H. J. Laanbroek. 1998. Nearly identical 16S rRNA sequences recovered from lakes in North America and Europe indicate the existence of clades of globally distributed freshwater bacteria. Syst. Appl. Microbiol. 21:546-556.
    • (1998) Syst. Appl. Microbiol. , vol.21 , pp. 546-556
    • Zwart, G.1    Hiorns, W.D.2    Methé, B.A.3    Van Agterveld, M.P.4    Huismans, R.5    Nold, S.C.6    Zehr, J.P.7    Laanbroek, H.J.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.