Scaling features of noncoding DNA

Physica A: Statistical Mechanics and its Applications

Volumn 273, Issue 1-2, 1999, Pages 1-18

  Stanley, H E ^a   Buldyrev, S V ^a   Goldberger, A L ^b,d   Havlin, S ^c   Peng, C K ^a,b   Simons, M ^b  

^a Boston University   (United States)

^b BETH ISRAEL DEACONESS MEDICAL CENTER   (United States)

^c BAR ILAN UNIVERSITY   (Israel)

^d Boston University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; FUNGAL DNA; NUCLEOTIDE;

ALGORITHM; ARTICLE; COMPARATIVE STUDY; DNA SEQUENCE; FRACTAL ANALYSIS; GENETIC CODE; GENETICS; INTRON; LINGUISTICS; MATHEMATICS; NASA DISCIPLINE CARDIOPULMONARY; NON-NASA CENTER; NUCLEOTIDE SEQUENCE; SACCHAROMYCES CEREVISIAE; STATISTICAL ANALYSIS; STATISTICS;

NASA DISCIPLINE CARDIOPULMONARY; NON-NASA CENTER;

ALGORITHMS; BASE SEQUENCE; DATA INTERPRETATION, STATISTICAL; DNA; DNA, FUNGAL; FRACTALS; GENETIC CODE; INTRONS; LINGUISTICS; MATHEMATICS; NUCLEOTIDES; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS, DNA;

EID: 0347031049     PISSN: 03784371     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-4371(99)00407-0     Document Type: Article

References (50)

1. S. Tavaré, B.W. Giddings, in: M.S. Waterman (Ed.), Mathematical Methods for DNA Sequences, CRC Press, Boca Raton, FL, 1989, pp. 117-132, and refs. therein.
2. E.W. Montroll, M.F. Shlesinger, in: J.L. Lebowitz, E.W. Montroll (Eds.), Nonequilibrium Phenomena II. From Stochastics to Hydrodynamics, North-Holland, Amsterdam, 1984, pp. 1-121.
3. H.E. Stanley, N. Ostrowsky (Eds.), On Growth and Form: Fractal and Non-Fractal Pattern in Physics, Martinus Nijhoff Publishers, Dordrecht, 1986.
4. A. Bunde, S. Havlin (Eds.), Fractals and Disordered Systems, Springer, Berlin, 1991.
5. P.G. de Gennes, Scaling Concepts in Polymer Physics, Cornell University Press, Ithaca NY, 1979.
6. J. des Cloiseaux, J. Phys. (Paris) 41 (1980) 223.
7. M.Y. Azbel, Phys. Rev. Lett. 31 (1973) 589.
8. C.-K. Peng, S.V. Buldyrev, A.L. Goldberger, S. Havlin, F. Sciortino, M. Simons, H.E. Stanley, Nature 356 (1992) 168.
9. W. Li, K. Kaneko, Europhys. Lett. 17 (1992) 655.
10. C.L. Berthelsen, J.A. Glazier, M.H. Skolnick, Phys. Rev. A 45 (1992) 8902.
11. S. Cebrat, M.R. Dudek, Eur. Phys. J. B 3 and 117 (1998) 271, 78.
12. S. Cebrat, M.R. Dudek, A. Gierlik, M. Kowalczuk, P. Mackiewicz, Physica A 265 (1999) 78.
13. M.Y. Azbel, Biopolymers 21 (1982) 1687.
14. M.Y. Azbel, Phys. Rev. Lett. 75 (1995) 168.
15. S. Karlin, V. Brendel, Science 259 (1993) 677.
16. C.-K. Peng, S.V. Buldyrev, S. Havlin, M. Simons, H.E. Stanley, A.L. Goldberger, Phys. Rev. E 49 (1994) 1685.
17. G.M. Viswanathan, S.V. Buldyrev, S. Havlin, H.E. Stanley, Biophys. J. 72 (1997) 866.
18. S.M. Ossadnik, S.V. Buldyrev, A.L. Goldberger, S. Havlin, R.N. Mantegna, C.-K. Peng, M. Simons, H.E. Stanley, Biophys. J. 67 (1994) 64.
19. E.G. Uberbacher, R.J. Mural, Proc. Nat. Acad. Sci. USA 88 (1991) 11 261.
20. S.V. Buldyrev, A.L. Goldberger, S. Havlin, R.N. Mantegna, M.E. Matsa, C.-K. Peng, M. Simons, H.E. Stanley, Phys. Rev. E 51 (1995) 5084.
21. R. Voss, Phys. Rev. Lett. 68 (1992) 3805.
22. A. Arneodo, E. Bacry, P.V. Graves, J.F. Mugy, Phys. Rev. Lett. 74 (1995) 3293.
23. A. Arneodo, Y. d'Aubenton-Carafa, E. Bacry, P.V. Graves, J.F. Muzy, C. Thermes, Physica D 96 (1996) 291.
24. A. Arneodo, Y. d'Aubenton-Carafa, B. Audit, E. Bacry, J.F. Muzy, C. Thermes, Eur. Phys. J. B 1 (1998) 259.
25. A. Arneodo, Y. d'Aubenton-Carafa, B. Audit, E. Bacry, J F. Muzy, C. Thermes, Physica A 249 (1998) 439.
26. A. Schenkel, J. Zhang, Y-C. Zhang, Fractals 1 (1993) 47.
27. M. Amit, Y. Shmerler, E. Eisenberg, M. Abraham, N. Shnerb, Fractals 2 (1994) 7.
28. G. K. Zipf, Human Behavior and the Principle of "Least Effort", Addison-Wesley, New York, 1949.
29. R.N. Mantegna, S.V. Buldyrev, A.L. Goldberger, S. Havlin, C.-K. Peng, M. Simons, H.E. Stanley, Phys. Rev. Lett. 73 (1994) 3169.
30. R.N. Mantegna, S.V. Buldyrev, A.L. Goldberger, S. Havlin, C.-K. Peng, M. Simons, H.E. Stanley, Phys. Rev. E 52 (1995) 2939.
31. L. Brillouin, Science and Information Theory, Academic Press, New York, 1956.
32. C.E. Shannon, Bell Systems Technol. J. 80 (1951) 50.
33. S. Bonhoeffer, A.V.M. Herz, M.C. Boerlijst, S. Nee, M.A. Nowak, R.M. May, Phys. Rev. Lett. 76 (1996) 1977.
34. J.D. Watson, M. Gilman, J. Witkowski, M. Zoller, Recombinant DNA, Scientific American Books, New York, 1992.
35. W.-H. Li, D. Graur, Fundamentals of Molecular Evolution, Sinauer Associates, Sunderland MA, 1991.
36. X. Gu, W.-H. Li, J. Mol. Evol. 38 (1994) 468.
37. S.V. Buldyrev, N.V. Dokholyan, A.L. Goldberger, S. Havlin, C.-K. Peng, H.E. Stanley, G.M. Viswanathan, Physica A 249 (1998) 430.
38. S.V. Buldyrev et al., Physica A 273 (1999) 19-32 [these proceedings].
39. S.V. Buldyrev, A.L. Goldberger, S. Havlin, C.-K. Peng, H.E. Stanley, M.H.R. Stanley, M. Simons, Biophys. J. 65 (1993) 2673.
40. A.Yu. Grosberg, Y. Rabin, S. Havlin, A. Neer, Europhys. Lett. 23 (1993) 373.
41. C.-K. Peng, J. Mietus, J. Hausdorff, S. Havlin, H.E. Stanley, A.L. Goldberger, Phys. Rev. Lett. 70 (1993) 1343.
42. C.-K. Peng, S. V. Buldyrev, J.M. Hausdorff, S. Havlin, J.E. Mietus, M. Simons, H.E. Stanley, A.L. Goldberger, in: G.A. Losa, T.F. Nonnenmacher, E.R. Weibel (Eds.), Fractals in Biology and Medicine, Birkhauser Verlag, Boston, 1994.
43. C.K. Peng, S. Havlin, H.E. Stanley, A.L. Goldberger, Chaos 5 (1995) 82.
44. C. K. Peng, J.M. Hausdorff, J.E. Mietus, S. Havlin, H.E. Stanley, A.L. Goldberger, in: U. Frisch, M.F. Shlesinger, G. Zaslavsky (Eds.), Proceedings of the 1993 International Conference on Lévy Flights, Springer, Berlin, 1995.
45. E. Koscielny-Bunde, A. Bunde, S. Havlin, H.E. Roman, Y. Goldreich, H.-J. Schellnhuber, Phys. Rev. Lett. 81 (1998) 729.
46. J.M. Hausdorff, C.-K. Peng, Z. Ladin, J.Y. Wei, A.L. Goldberger, J. Appl. Physiol. 78 (1995) 349.
47. W.B. Cannon, Physiol. Rev. 9 (1929) 399.
48. P.Ch. Ivanov, M.G. Rosenblum, C.-K. Peng, J. Mietus, S. Havlin, H.E. Stanley, A.L. Goldberger, Nature 383 (1996) 323.
49. P.Ch. Ivanov, L.A.N. Amaral, A.L. Goldberger, H.E. Stanley, Europhys. Lett. 43 (1998) 363.
50. P.Ch. Ivanov, L.A.N. Amaral, A.L. Goldberger, S. Havlin, M.G. Rosenblum, Z. Struzik, H.E. Stanley, Nature 399 (1999) 461.