Analysis of Vietnamese rice germplasm provides an insight into Japonica rice differentiation

Plant Breeding

Volumn 122, Issue 6, 2003, Pages 497-502

  Fukuoka, S ^a   Alpatyeva, N V ^b   Ebana, K ^a   Luu, N T ^c   Nagamine, T ^a  

^a NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

^b N I VAVILOV ALL RUSSIAN INSTITUTE OF PLANT GENETIC RESOURCES   (Russian Federation)

^c Vietnam Agricultural Science Institute   (Viet Nam)

Author keywords

Cultural type differentiation; Genetic differentiation; Oryza sativa; RFLP; Upland rice

Indexed keywords

EMBRYOPHYTA; JAPONICA; ORYZA SATIVA;

EID: 0347030099     PISSN: 01799541     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1439-0523.2003.00908.x     Document Type: Article

References (24)

1. Causse, M. A., T. M. Fulton, Y. G. Cho, S. N. Anh, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P. C. Ronald, S. E. Harrington, G. Second, S. R. McCouch, and S. D. Tanksley, 1994: Saturated molecular map of the rice genome based on an interspecific backcross population. Genetics 138, 1251-1274.
2. Chang, T. T., 1976: The origin, evolution, cultivation, dissemination diversification of Asian and African rice. Euphytica 25, 425-441.
3. Chen, W. B., I. Nakamura, Y. I. Sato, and H. Nakai, 1993: Distribution of deletion type in cpDNA of cultivated and wild rice. Jpn. J. Genet. 68, 597-603.
4. Cui, S. B., S. B. Peng, Y. Z. Xiang, C. G. Zu, S. B. Yu, and Q. Zhang. 2002: Molecular dissection of seedling-vigor and associated physiological traits in rice. Theor. Appl. Genet. 105, 745-753.
5. Glaszmann, J. C., 1987: Isozymes and classification of Asian rice varieties. Theor. Appl. Genet. 74, 21-30.
6. 2 population. Genetics 148, 479-494.
7. Ishikawa, R., Y. Sato, T. Tang, and I. Nakamura, 2002: Different maternal origins of Japanese lowland and upland rice populations. Theor. Appl. Genet. 104, 976-980.
8. Kanno, A., N. Watanabe, I. Nakamura, and A. Hirai, 1993: Variations in chloroplast DNA from rice (Oryza sativa): differences between deletions mediated by short direct-repeat sequences within a single species. Theor. Appl. Genet. 86, 579-584.
9. Kato, S., S. Kosaka, and S. Hara, 1928: On the affinity of rice varieties as shown by the fertility of hybrid plants. J. Dep. Agr. Kyushu Imp. Univ. 3, 132-147 (in Japanese).
10. Kurata, N., Y. Nagamura, K. Yamamoto, Y. Harushima, N. Sue, J. Wu, B. A. Antonio, A. Shomura, T. Shimizu, S. Y. Lin, T. Inoue, A. Fukuda, T. Shimano, Y. Kuboki, T. Toyama, Y. Miyamoto, T. Kirihara, K. Hayasaka, A. Miyao, L. Monna, H. S. Zhong, Y. Tamura, Z. X. Wang, T. Momma, Y. Umehara, M. Yano, T. Sasaki, and Y. Minobe, 1994: A 300 kilobase internal genetic map of rice including 883 expressed sequences. Nat. Genet. 8, 365-372.
11. 1 fertility in distant crosses of rice (Oryza sativa L.). Theor. Appl. Genet. 96, 526-538.
12. Miura, K., S. Y. Lin, M. Yano, and T. Nagamine, 2001: Mapping quantitative trait loci controlling low temperature germinability in rice (Oryza sativa L.). Breed. Sci. 51, 293-299.
13. Morishima, H., and H. I. Oka, 1981: Phylogenetic differentiation of cultivated rice xxvii. Numerical evaluation of the Indica-Japonica differentiation. Jpn. J. Breed. 31, 402-413.
14. Murray, M. G., and W. F. Thompson, 1980: Rapid isolation of high molecular weight plant DNA. Nuc. Acids Res. 8, 4321-4325.
15. Oka, H. I., 1953: Phylogenetic differentiation of cultivated rice plant. I. Variation in respective characteristics and their combinations in rice cultivars lethal genes in rice. Jpn. J. Breed. 3, 23-30 (in Japanese).
16. Oka, H. I., 1958: Intervarietal variation and classification of cultivated rice. Indian J. Genet. Plant Breed. 18, 79-89.
17. Okuno, K., M. Katsuta, H. Nakayama, K. Ebana, and S. Fukuoka, 1996: International collaboration on plant diversity analysis. In; H. Seko (ed.), Proceedings of the 4th International Workshop on Genetic Resources, 157-169. MAFF, Japan.
18. Qian, H.-R., J.-Y. Zhuang, H.-X. Lin, J. Lu, and K.-L. Zheng, 1995: Identification of set of RFLP probes for subspecies differentiation in Oryza sativa L. Theor. Appl. Genet. 90, 878-884.
19. Redona, E. D., and D. J. Mackill, 1996: Mapping quantitative trait loci for seedling vigor in rice using RFLPs. Theor. Appl. Genet. 92, 395-402.
20. Sano, R., and H. Morishima, 1992: Indica-Japonica differentiation of rice cultivars viewed from variations in key characters and isozymes, with special reference to landraces from the Himalayan hilly areas. Theor. Appl. Genet. 84, 266-274.
21. Sato, Y. I., 1991: Variation in spikelet shape of Indica and Japonica rice cultivars in Asian origin. Jpn. J. Breed. 41, 121-134 (in Japanese).
22. Yadav, R., B. Courtois, N. Huang, and G. McLaren, 1997: Mapping genes controlling root morphology and root distribution in a doubles-haploid population of rice. Theor. Appl. Genet. 94, 619-632.
23. Zhang, J., H. G. Zheng, A. Aarti, G. Pantuwan, T. T. Nguyen, J. N. Tripathy, A. K. Sarial, S. Robin, R. C. Babu, B. D. Nguyen, S. Sarkarung, A. Blum, and H. T. Nguyen, 2001: Locating genomic regions associated with components of drought resistance in rice: comparative mapping within and across species. Theor. Appl. Genet. 103, 19-29.
24. Zheng, K., H. Qian, B. Shen, J. Zhuang, H. Lin, and J. Lu, 1994: RFLP-based phylogenetic analysis of wide compatibility varieties in Oriza sativa L. Theor. Appl. Genet. 88, 65-69.