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Volumn 148, Issue 12, 2003, Pages 2397-2418

The human rhinovirus internal cis-acting replication element (cre) exhibits disparate properties among serotypes

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

EID: 0346936033     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-003-0177-7     Document Type: Article
Times cited : (13)

References (49)
  • 1
    • 0025049209 scopus 로고
    • A functional ribonucleoprotein complex forms around the 5′ end of poliovirus RNA
    • Andino R, Rieckhof GE, Baltimore D (1990) A functional ribonucleoprotein complex forms around the 5′ end of poliovirus RNA. Cell 63: 369-380
    • (1990) Cell , vol.63 , pp. 369-380
    • Andino, R.1    Rieckhof, G.E.2    Baltimore, D.3
  • 2
    • 0025191906 scopus 로고
    • Substitutions in the protease (3Cpro) gene of poliovirus can suppress a mutation in the 5′ noncoding region
    • Andino R, Rieckhof GE, Trono D, Baltimore D (1990) Substitutions in the protease (3Cpro) gene of poliovirus can suppress a mutation in the 5′ noncoding region. J Virol 64: 607-612
    • (1990) J Virol , vol.64 , pp. 607-612
    • Andino, R.1    Rieckhof, G.E.2    Trono, D.3    Baltimore, D.4
  • 3
    • 0027170180 scopus 로고
    • Poliovirus RNA synthesis utilizes an RNP complex formed around the 5′-end of viral RNA
    • Andino R, Rieckhof GE, Achacoso PL, Baltimore D (1993) Poliovirus RNA synthesis utilizes an RNP complex formed around the 5′-end of viral RNA. EMBO 12: 3587-3598
    • (1993) EMBO , vol.12 , pp. 3587-3598
    • Andino, R.1    Rieckhof, G.E.2    Achacoso, P.L.3    Baltimore, D.4
  • 5
    • 0032146721 scopus 로고    scopus 로고
    • Switch from translation to RNA replication in a positive-stranded RNA virus
    • Gamarnik AV, Andino R (1998) Switch from translation to RNA replication in a positive-stranded RNA virus. Genes Dev 12: 2293-2304
    • (1998) Genes Dev , vol.12 , pp. 2293-2304
    • Gamarnik, A.V.1    Andino, R.2
  • 6
    • 0034766987 scopus 로고    scopus 로고
    • Biochemical and genetic studies of the initiation of human rhinovirus 2 RNA replication: Identification of a cis-replicating element in the coding sequence of 2A(pro)
    • Gerber K, Wimmer E, Paul AV (2001) Biochemical and genetic studies of the initiation of human rhinovirus 2 RNA replication: identification of a cis-replicating element in the coding sequence of 2A(pro). J Virol 75: 10979-10990
    • (2001) J Virol , vol.75 , pp. 10979-10990
    • Gerber, K.1    Wimmer, E.2    Paul, A.V.3
  • 8
    • 0037276580 scopus 로고    scopus 로고
    • Structure and function analysis of the poliovirus cis-acting replication element (CRE)
    • Goodfellow IG, Kerrigan D, Evans DJ (2003) Structure and function analysis of the poliovirus cis-acting replication element (CRE). RNA 9: 124-137
    • (2003) RNA , vol.9 , pp. 124-137
    • Goodfellow, I.G.1    Kerrigan, D.2    Evans, D.J.3
  • 9
    • 0028822463 scopus 로고
    • Molecular relationships between 21 human rhinovirus serotypes
    • Horsnell C, Gama RE, Hughes PJ, Stanway G (1995) Molecular relationships between 21 human rhinovirus serotypes. J Gen Virol 76: 2549-2555
    • (1995) J Gen Virol , vol.76 , pp. 2549-2555
    • Horsnell, C.1    Gama, R.E.2    Hughes, P.J.3    Stanway, G.4
  • 10
    • 0023845301 scopus 로고
    • The nucleotide sequence of human rhinovirus 1B: Molecular relationships within the rhinovirus genus
    • Hughes PJ, North C, Jellis CH, Minor PD, Stanway G (1988) The nucleotide sequence of human rhinovirus 1B: molecular relationships within the rhinovirus genus. J Gen Virol 69: 49-58
    • (1988) J Gen Virol , vol.69 , pp. 49-58
    • Hughes, P.J.1    North, C.2    Jellis, C.H.3    Minor, P.D.4    Stanway, G.5
  • 11
    • 0027229229 scopus 로고
    • Biochemical and genetic evidence for a pseudoknot structure at the 3′ terminus of the poliovirus RNA genome and its role in viral RNA amplification
    • Jacobson SJ, Konings DAM, Sarnow P (1993) Biochemical and genetic evidence for a pseudoknot structure at the 3′ terminus of the poliovirus RNA genome and its role in viral RNA amplification. J Virol 67: 2961-2971
    • (1993) J Virol , vol.67 , pp. 2961-2971
    • Jacobson, S.J.1    Konings, D.A.M.2    Sarnow, P.3
  • 12
    • 0023945724 scopus 로고
    • Construction and characterization of poliovirus subgenomic replicons
    • Kaplan G, Racaniello VR (1988) Construction and characterization of poliovirus subgenomic replicons. J Virol 62: 1687-1696
    • (1988) J Virol , vol.62 , pp. 1687-1696
    • Kaplan, G.1    Racaniello, V.R.2
  • 13
    • 0031854886 scopus 로고    scopus 로고
    • A long-range interaction in Qbeta RNA that bridges the thousand nucleotides between the M-site and the 3′ end is required for replication
    • 12a. Klovins J, Berzins V, van Duin J (1998) A long-range interaction in Qbeta RNA that bridges the thousand nucleotides between the M-site and the 3′ end is required for replication. RNA 4: 948-957
    • (1998) RNA , vol.4 , pp. 948-957
    • Klovins, J.1    Berzins, V.2    Van Duin, J.3
  • 14
    • 0019366789 scopus 로고
    • Stable hairpin structure within the 5′-terminal 85 nucleotides of poliovirus RNA
    • Larsen GR, Semler BL, Wimmer E (1981) Stable hairpin structure within the 5′-terminal 85 nucleotides of poliovirus RNA. J Virol 37: 328-335
    • (1981) J Virol , vol.37 , pp. 328-335
    • Larsen, G.R.1    Semler, B.L.2    Wimmer, E.3
  • 15
    • 0028607508 scopus 로고
    • Complete sequence of the RNA genome of human rhinovirus 16, a clinically useful common cold virus belonging to the ICAM-1 receptor group
    • Lee W-M, Wang W, Rueckert RR (1995) Complete sequence of the RNA genome of human rhinovirus 16, a clinically useful common cold virus belonging to the ICAM-1 receptor group. Virus Genes 9: 177-181
    • (1995) Virus Genes , vol.9 , pp. 177-181
    • Lee, W.-M.1    Wang, W.2    Rueckert, R.R.3
  • 16
    • 0033613152 scopus 로고    scopus 로고
    • A coding RNA sequence acts as a replication signal in cardioviruses
    • Lobert PE, Escriou N, Ruelle J, Michiels T (1999) A coding RNA sequence acts as a replication signal in cardioviruses. Proc Natl Acad Sci USA 96: 11560-11565
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 11560-11565
    • Lobert, P.E.1    Escriou, N.2    Ruelle, J.3    Michiels, T.4
  • 17
    • 0036776467 scopus 로고    scopus 로고
    • Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus
    • Mason PW, Bezborodova SV, Henry TM (2002) Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus. J Virol 76: 9686-9694
    • (2002) J Virol , vol.76 , pp. 9686-9694
    • Mason, P.W.1    Bezborodova, S.V.2    Henry, T.M.3
  • 18
    • 0033591465 scopus 로고    scopus 로고
    • Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
    • Mathews DH, Sabina J, Zuker M, Turner DH (1999) Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J Mol Biol 288: 911-940
    • (1999) J Mol Biol , vol.288 , pp. 911-940
    • Mathews, D.H.1    Sabina, J.2    Zuker, M.3    Turner, D.H.4
  • 19
    • 0030025543 scopus 로고    scopus 로고
    • Capsid coding sequence is required for efficient replication of human rhinovirus 14 RNA
    • McKnight KL, Lemon SM (1996) Capsid coding sequence is required for efficient replication of human rhinovirus 14 RNA. J Virol 70: 1941-1952
    • (1996) J Virol , vol.70 , pp. 1941-1952
    • McKnight, K.L.1    Lemon, S.M.2
  • 20
    • 0031762554 scopus 로고    scopus 로고
    • The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication
    • McKnight KL, Lemon SM (1998) The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication. RNA 4: 1569-1584
    • (1998) RNA , vol.4 , pp. 1569-1584
    • McKnight, K.L.1    Lemon, S.M.2
  • 21
    • 0346516634 scopus 로고    scopus 로고
    • In vitro and in vivo comparisons of the replication of genomic and subgenomic RNAs derived from two human rhinovirus (HRV) serotypes
    • University of Massachusetts, Amherst, Massachusetts
    • McKnight KL, Barton DJ, Lemon SM (1999) In vitro and in vivo comparisons of the replication of genomic and subgenomic RNAs derived from two human rhinovirus (HRV) serotypes. In: 18th Annual Meeting of the American Society for Virology, University of Massachusetts, Amherst, Massachusetts
    • (1999) 18th Annual Meeting of the American Society for Virology
    • McKnight, K.L.1    Barton, D.J.2    Lemon, S.M.3
  • 22
    • 0031060472 scopus 로고    scopus 로고
    • Kissing of the two predominant hairpin loops in the coxsackie B virus 3′ untranslated region is the essential structural feature of the origin of replication required for negative-strand RNA synthesis
    • Melchers WJ, Hoenderop JG, Bruins Slot HJ, Pleij CW, Pilipenko EV, Agol VI, Galama JM (1997) Kissing of the two predominant hairpin loops in the coxsackie B virus 3′ untranslated region is the essential structural feature of the origin of replication required for negative-strand RNA synthesis. J Virol 71: 686-696
    • (1997) J Virol , vol.71 , pp. 686-696
    • Melchers, W.J.1    Hoenderop, J.G.2    Bruins Slot, H.J.3    Pleij, C.W.4    Pilipenko, E.V.5    Agol, V.I.6    Galama, J.M.7
  • 23
    • 0032708706 scopus 로고    scopus 로고
    • Similar interactions of the poliovirus and rhinovirus 3D polymerases with the 3′ untranslated region of rhinovirus 14
    • Meredith JM, Rohll JB, Almond JW, Evans DJ (1999) Similar interactions of the poliovirus and rhinovirus 3D polymerases with the 3′ untranslated region of rhinovirus 14. J Virol 73: 9952-9958
    • (1999) J Virol , vol.73 , pp. 9952-9958
    • Meredith, J.M.1    Rohll, J.B.2    Almond, J.W.3    Evans, D.J.4
  • 24
    • 0037405928 scopus 로고    scopus 로고
    • Poliovirus cre(2C)-Dependent Synthesis of VPgpUpU Is Required for Positive-but Not Negative-Strand RNA Synthesis
    • Morasco BJ, Sharma N, Parilla J, Flanegan JB (2003) Poliovirus cre(2C)-Dependent Synthesis of VPgpUpU Is Required for Positive-but Not Negative-Strand RNA Synthesis. J Virol 77: 5136-5144
    • (2003) J Virol , vol.77 , pp. 5136-5144
    • Morasco, B.J.1    Sharma, N.2    Parilla, J.3    Flanegan, J.B.4
  • 25
    • 0037383425 scopus 로고    scopus 로고
    • Poliovirus CRE-dependent VPg uridylylation is required for positive-strand RNA synthesis but not for negative-strand RNA synthesis
    • Murray KE, Barton DJ (2003) Poliovirus CRE-dependent VPg uridylylation is required for positive-strand RNA synthesis but not for negative-strand RNA synthesis. J Virol 77: 4739-4750
    • (2003) J Virol , vol.77 , pp. 4739-4750
    • Murray, K.E.1    Barton, D.J.2
  • 27
    • 0030820403 scopus 로고    scopus 로고
    • Poly (rC) binding protein 2 forms a ternary complex with the 5′ - Terminal sequences of poliovirus RNA and the viral 3CD proteinase
    • Parsley TB, Towner JS, Blyn LB, Ehrenfeld E, Semler BL (1997) Poly (rC) binding protein 2 forms a ternary complex with the 5′ - terminal sequences of poliovirus RNA and the viral 3CD proteinase. RNA 3: 1124-1134
    • (1997) RNA , vol.3 , pp. 1124-1134
    • Parsley, T.B.1    Towner, J.S.2    Blyn, L.B.3    Ehrenfeld, E.4    Semler, B.L.5
  • 28
    • 0033766003 scopus 로고    scopus 로고
    • Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg
    • Paul AV, Rieder E, Kim DW, van Boom JH, Wimmer E (2000) Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg. J Virol 74: 10359-10370
    • (2000) J Virol , vol.74 , pp. 10359-10370
    • Paul, A.V.1    Rieder, E.2    Kim, D.W.3    Van Boom, J.H.4    Wimmer, E.5
  • 29
    • 0026627865 scopus 로고
    • A poliovirus replicon containing the chloramphenicol acetyltransferase gene can be used to study the replication and encapsidation of poliovirus RNA
    • Percy N, Barclay WS, Sullivan M, Almond JW (1992) A poliovirus replicon containing the chloramphenicol acetyltransferase gene can be used to study the replication and encapsidation of poliovirus RNA. J Virol 66: 5040-5046
    • (1992) J Virol , vol.66 , pp. 5040-5046
    • Percy, N.1    Barclay, W.S.2    Sullivan, M.3    Almond, J.W.4
  • 30
    • 0026572608 scopus 로고
    • Towards identification of cis-acting elements involved in the replication of enterovirus and rhinovirus RNAs: A proposal for the existence of tRNA-like terminal structures
    • Pilipenko EV, Maslova SV, Sinyakov AN, Agol VI (1992) Towards identification of cis-acting elements involved in the replication of enterovirus and rhinovirus RNAs: A proposal for the existence of tRNA-like terminal structures. Nucleic Acids Res 20: 1739-1745
    • (1992) Nucleic Acids Res , vol.20 , pp. 1739-1745
    • Pilipenko, E.V.1    Maslova, S.V.2    Sinyakov, A.N.3    Agol, V.I.4
  • 31
    • 0029838843 scopus 로고    scopus 로고
    • Cis-acting element, oriR, involved in the inititation of (-) strand poliovirus RNA: A quasi-globular multi-domain RNA structure maintained by tertiary (kissing') interactions
    • Pilipenko EV, Poperechny V, Maslova SV, Melchers WJG, Bruins Slot HJ, Agol VI (1996) Cis-acting element, oriR, involved in the inititation of (-) strand poliovirus RNA: a quasi-globular multi-domain RNA structure maintained by tertiary (kissing') interactions. EMBO 15: 5428-5436
    • (1996) EMBO , vol.15 , pp. 5428-5436
    • Pilipenko, E.V.1    Poperechny, V.2    Maslova, S.V.3    Melchers, W.J.G.4    Bruins Slot, H.J.5    Agol, V.I.6
  • 32
    • 0028859870 scopus 로고
    • Encapsidation of poliovirus replicons encoding the complete human immunodeficiency virus type 1 gag gene by using a complementation system which provides the P1 capsid protein in trans
    • Porter DC, Ansardi DC, Morrow CD (1995) Encapsidation of poliovirus replicons encoding the complete human immunodeficiency virus type 1 gag gene by using a complementation system which provides the P1 capsid protein in trans. J Virol 69:1548-1555
    • (1995) J Virol , vol.69 , pp. 1548-1555
    • Porter, D.C.1    Ansardi, D.C.2    Morrow, C.D.3
  • 33
    • 0032579846 scopus 로고    scopus 로고
    • Demonstration of the specificity of poliovirus encapsidation using a novel replicon which encodes enzymatically active firefly luciferase
    • Porter DC, Ansardi DC, Wang J, McPherson S, Moldoveanu Z, Morrow CD (1998) Demonstration of the specificity of poliovirus encapsidation using a novel replicon which encodes enzymatically active firefly luciferase. Virology 243: 1-11
    • (1998) Virology , vol.243 , pp. 1-11
    • Porter, D.C.1    Ansardi, D.C.2    Wang, J.3    McPherson, S.4    Moldoveanu, Z.5    Morrow, C.D.6
  • 34
    • 0028359843 scopus 로고
    • The 5′-untranslated regions of picornavirus RNAs contain independent functional domains essential for RNA replication and translation
    • Rohll JB, Percy N, Ley R, Evans DJ, Almond JW, Barclay WS (1994) The 5′-untranslated regions of picornavirus RNAs contain independent functional domains essential for RNA replication and translation. J Virol 68: 4384-4391
    • (1994) J Virol , vol.68 , pp. 4384-4391
    • Rohll, J.B.1    Percy, N.2    Ley, R.3    Evans, D.J.4    Almond, J.W.5    Barclay, W.S.6
  • 35
    • 0028824892 scopus 로고
    • The 3′ untranslated region of picornavirus RNA: Features required for efficient genome replication
    • Rohll JB, Moon DH, Evans DJ, Almond JW (1995) The 3′ untranslated region of picornavirus RNA: features required for efficient genome replication. J Virol 69: 7835-7844
    • (1995) J Virol , vol.69 , pp. 7835-7844
    • Rohll, J.B.1    Moon, D.H.2    Evans, D.J.3    Almond, J.W.4
  • 36
    • 0000327130 scopus 로고    scopus 로고
    • Picornaviridae and Their Replication
    • Fields BN, Knipe DM, Howley PM (eds). Lippincott-Raven, Philadelphia
    • Rueckert RR (1996) Picornaviridae and Their Replication. In: Fields BN, Knipe DM, Howley PM (eds) Fundamental Virology. Lippincott-Raven, Philadelphia, pp 409-450
    • (1996) Fundamental Virology , pp. 409-450
    • Rueckert, R.R.1
  • 37
    • 0009903518 scopus 로고
    • A poliovirus temperature-sensitive RNA synthesis mutant located in a noncoding region of the genome
    • Sarnow P, Bernstein HD, Baltimore D (1986) A poliovirus temperature-sensitive RNA synthesis mutant located in a noncoding region of the genome. Proc Natl Acad Sci USA 83: 571-575
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 571-575
    • Sarnow, P.1    Bernstein, H.D.2    Baltimore, D.3
  • 38
    • 0024585229 scopus 로고
    • Role of 3′-end sequences in infectivity of poliovirus transcripts made in vitro
    • Sarnow P (1989) Role of 3′-end sequences in infectivity of poliovirus transcripts made in vitro. J Virol 63: 467-470
    • (1989) J Virol , vol.63 , pp. 467-470
    • Sarnow, P.1
  • 39
    • 0022423551 scopus 로고
    • A novel transcription property of SP6 and T7 RNA polymerases: Dependence on template structure
    • Schenborn ET, Mierendorf RC Jr (1985) A novel transcription property of SP6 and T7 RNA polymerases: dependence on template structure. Nucleic Acids Res 13: 6223-6236
    • (1985) Nucleic Acids Res , vol.13 , pp. 6223-6236
    • Schenborn, E.T.1    Mierendorf Jr., R.C.2
  • 40
    • 0021971892 scopus 로고
    • Evidence for at least two dominant neutralization antigens on human rhinovirus 14
    • Sherry B, Rueckert RR (1985) Evidence for at least two dominant neutralization antigens on human rhinovirus 14. J Virol 53: 137-143
    • (1985) J Virol , vol.53 , pp. 137-143
    • Sherry, B.1    Rueckert, R.R.2
  • 41
    • 0025976987 scopus 로고
    • An RNA hairpin at the extreme 5′ end of the poliovirus RNA genome modulates viral translation in human cells
    • Simoes EAF, Sarnow P (1991) An RNA hairpin at the extreme 5′ end of the poliovirus RNA genome modulates viral translation in human cells. J Virol 65: 913-921
    • (1991) J Virol , vol.65 , pp. 913-921
    • Simoes, E.A.F.1    Sarnow, P.2
  • 43
    • 0029060743 scopus 로고
    • RNA-protein interactions directed by the 3′ end of human rhinovirus genomic RNA
    • Todd S, Nguyen JH, Semler BL (1995) RNA-protein interactions directed by the 3′ end of human rhinovirus genomic RNA. J Virol 69: 3605-3614
    • (1995) J Virol , vol.69 , pp. 3605-3614
    • Todd, S.1    Nguyen, J.H.2    Semler, B.L.3
  • 44
    • 0030802760 scopus 로고    scopus 로고
    • Replication-competent picornaviruses with complete genomic RNA 3′ noncoding region deletions
    • Todd S, Towner JS, Brown DM, Semler BL (1997) Replication-competent picornaviruses with complete genomic RNA 3′ noncoding region deletions. J Virol 71: 8868-8874
    • (1997) J Virol , vol.71 , pp. 8868-8874
    • Todd, S.1    Towner, J.S.2    Brown, D.M.3    Semler, B.L.4
  • 45
    • 0028871749 scopus 로고
    • Genetic analysis of a hydrophobic domain of coxsackie B3 virus protein 2B: A moderate degree of hydrophobicity is required for a cis-acting function in viral RNA synthesis
    • van Kuppeveld FJ, Galama JM, Zoll J, Melchers WJ (1995) Genetic analysis of a hydrophobic domain of coxsackie B3 virus protein 2B: a moderate degree of hydrophobicity is required for a cis-acting function in viral RNA synthesis. J Virol 69: 7782-7790
    • (1995) J Virol , vol.69 , pp. 7782-7790
    • Van Kuppeveld, F.J.1    Galama, J.M.2    Zoll, J.3    Melchers, W.J.4
  • 46
    • 0036314310 scopus 로고    scopus 로고
    • Sequence requirements for viral RNA replication and VPg uridylylation directed by the internal cis-acting replication element (cre) of human rhinovirus type 14
    • Yang Y, Rijnbrand R, McKnight KL, Wimmer E, Paul A, Martin A, Lemon SM (2002) Sequence requirements for viral RNA replication and VPg uridylylation directed by the internal cis-acting replication element (cre) of human rhinovirus type 14. J Virol 76: 7485-7494
    • (2002) J Virol , vol.76 , pp. 7485-7494
    • Yang, Y.1    Rijnbrand, R.2    McKnight, K.L.3    Wimmer, E.4    Paul, A.5    Martin, A.6    Lemon, S.M.7
  • 47
    • 0037405787 scopus 로고    scopus 로고
    • Functional dissection of a poliovirus cis-acting replication element [PV-cre(2C)]: Analysis of single- and dual-cre viral genomes and proteins that bind specifically to PV-cre RNA
    • Yin J, Paul AV, Wimmer E, Rieder E (2003) Functional dissection of a poliovirus cis-acting replication element [PV-cre(2C)]: analysis of single- and dual-cre viral genomes and proteins that bind specifically to PV-cre RNA. J Virol 77: 5152-5166
    • (2003) J Virol , vol.77 , pp. 5152-5166
    • Yin, J.1    Paul, A.V.2    Wimmer, E.3    Rieder, E.4


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