메뉴 건너뛰기




Volumn 81, Issue 11, 2003, Pages 1091-1103

Molecular diversity of the 5S rDNA units in the Elymus dahuricus complex (Poaceae: Triticeae) supports the genomic constitution of St, Y, and H haplomes

Author keywords

5S rDNA; Concerted evolution; Haplomes; Unit classes

Indexed keywords

BIODIVERSITY; CLONING; DNA; GENES;

EID: 0346463029     PISSN: 00084026     EISSN: None     Source Type: Journal    
DOI: 10.1139/b03-102     Document Type: Article
Times cited : (19)

References (39)
  • 1
    • 0036300421 scopus 로고    scopus 로고
    • Differentiation in the Elymus dahuricus complex (Poaceae): Evidence from grain proteins, DNA, and crossability
    • Agafonov, A.V., Baum, B.R., Bailey, L.G., and Agafonova, O.V. 2001. Differentiation in the Elymus dahuricus complex (Poaceae): evidence from grain proteins, DNA, and crossability. Hereditas, 135: 277-289.
    • (2001) Hereditas , vol.135 , pp. 277-289
    • Agafonov, A.V.1    Baum, B.R.2    Bailey, L.G.3    Agafonova, O.V.4
  • 3
    • 0031109759 scopus 로고    scopus 로고
    • The molecular diversity of the 5S rRNA gene in Kengyilia alatavica (Drobov) J.L. Yang, Yen & Baum (Poaceae: Triticeae): Potential genomic assignment of different rDNA units
    • Baum, B.R., and Bailey, L.G. 1997. The molecular diversity of the 5S rRNA gene in Kengyilia alatavica (Drobov) J.L. Yang, Yen & Baum (Poaceae: Triticeae): potential genomic assignment of different rDNA units. Genome, 40: 215-228.
    • (1997) Genome , vol.40 , pp. 215-228
    • Baum, B.R.1    Bailey, L.G.2
  • 4
    • 0034478960 scopus 로고    scopus 로고
    • The 5S rDNA units in Kengyilia (Poaceae: Triticeae): Diversity of the nontranscribed spacer and genomic relationships
    • Baum, B.R., and Bailey, L.G. 2000. The 5S rDNA units in Kengyilia (Poaceae: Triticeae): diversity of the nontranscribed spacer and genomic relationships. Can. J. Bot. 78: 1571-1579.
    • (2000) Can. J. Bot. , vol.78 , pp. 1571-1579
    • Baum, B.R.1    Bailey, L.G.2
  • 5
    • 0034990236 scopus 로고    scopus 로고
    • The 5S rRNA gene sequence variation in wheats and some polyploidy wheat progenitors (Poaceae: Triticeae)
    • Baum, B.R., and Bailey, L.G. 2001. The 5S rRNA gene sequence variation in wheats and some polyploidy wheat progenitors (Poaceae: Triticeae). Genet. Resour. Crop Evol., 48: 35-51.
    • (2001) Genet. Resour. Crop Evol. , vol.48 , pp. 35-51
    • Baum, B.R.1    Bailey, L.G.2
  • 6
    • 0028676173 scopus 로고
    • The molecular diversity of the 5S rRNA gene in barley (Hordeum vulgare)
    • Baum, B.R., and Johnson, D.A. 1994. The molecular diversity of the 5S rRNA gene in barley (Hordeum vulgare). Genome, 37: 992-998.
    • (1994) Genome , vol.37 , pp. 992-998
    • Baum, B.R.1    Johnson, D.A.2
  • 7
    • 0030087902 scopus 로고    scopus 로고
    • The 5S rRNA gene units in ancestral two-rowed barley (Hordeum spontaneum C. Koch) and bulbous barley (H. bulbosum L.): Sequence analysis and phylogenetic relationships with the 5S rDNA units in cultivated barley (H. vulgare L.)
    • Baum, B.R., and Johnson, D.A. 1996. The 5S rRNA gene units in ancestral two-rowed barley (Hordeum spontaneum C. Koch) and bulbous barley (H. bulbosum L.): sequence analysis and phylogenetic relationships with the 5S rDNA units in cultivated barley (H. vulgare L.). Genome, 39: 140-149.
    • (1996) Genome , vol.39 , pp. 140-149
    • Baum, B.R.1    Johnson, D.A.2
  • 8
    • 0032193634 scopus 로고    scopus 로고
    • The 5S rRNA gene in sea barley (Hordeum marinum Hudson sensu lato): Sequence variation among repeat units and relationship to the X haplome in barley (Hordeum)
    • Baum, B.R., and Johnson, D.A. 1998. The 5S rRNA gene in sea barley (Hordeum marinum Hudson sensu lato): sequence variation among repeat units and relationship to the X haplome in barley (Hordeum). Genome, 41: 652-661.
    • (1998) Genome , vol.41 , pp. 652-661
    • Baum, B.R.1    Johnson, D.A.2
  • 9
    • 0033208567 scopus 로고    scopus 로고
    • The 5S rRNA gene in wall barley (Hordeum murinum L. sensu lato): Sequence variation among repeat units and relationship to the Y haplome in the genus Hordeum (Poaceae: Triticeae)
    • Baum, B.R., and Johnson, D.A. 1999. The 5S rRNA gene in wall barley (Hordeum murinum L. sensu lato): Sequence variation among repeat units and relationship to the Y haplome in the genus Hordeum (Poaceae: Triticeae). Genome, 42: 854-866.
    • (1999) Genome , vol.42 , pp. 854-866
    • Baum, B.R.1    Johnson, D.A.2
  • 10
    • 0034478961 scopus 로고    scopus 로고
    • The 5S rRNA gene units in the native New World annual Hordeum species (Triticeae: Poaceae)
    • Baum, B.R., and Johnson, D.A. 2000. The 5S rRNA gene units in the native New World annual Hordeum species (Triticeae: Poaceae). Can. J. Bot. 78: 1590-1602.
    • (2000) Can. J. Bot. , vol.78 , pp. 1590-1602
    • Baum, B.R.1    Johnson, D.A.2
  • 11
    • 0036372092 scopus 로고    scopus 로고
    • A comparison of the 5S rDNA diversity in the Hordeum brachyantherum- californicum complex with those of the eastern Asiatic Hordeum roshevitzii and the South American Hordeum cordobense (Triticeae: Poaceae)
    • Baum, B.R., and Johnson, D.A. 2002. A comparison of the 5S rDNA diversity in the Hordeum brachyantherum-californicum complex with those of the eastern Asiatic Hordeum roshevitzii and the South American Hordeum cordobense (Triticeae: Poaceae). Can. J. Bot. 80: 752-762.
    • (2002) Can. J. Bot. , vol.80 , pp. 752-762
    • Baum, B.R.1    Johnson, D.A.2
  • 12
    • 0000182568 scopus 로고
    • Roegneria: Its generic limits and justification for its recognition
    • Baum, B.R., Yen, C., and Yang, J.L. 1991. Roegneria: its generic limits and justification for its recognition. Can. J. Bot. 69: 282-294.
    • (1991) Can. J. Bot. , vol.69 , pp. 282-294
    • Baum, B.R.1    Yen, C.2    Yang, J.L.3
  • 13
    • 0036303420 scopus 로고    scopus 로고
    • Defining groups among multicopy genes prior to inferring phylogeny, with special emphasis on the Triticeae (Poaceae)
    • Baum, B.R., Johnson, D.A., and Bailey, L.G. 2001. Defining groups among multicopy genes prior to inferring phylogeny, with special emphasis on the Triticeae (Poaceae). Hereditas, 135: 123-138.
    • (2001) Hereditas , vol.135 , pp. 123-138
    • Baum, B.R.1    Johnson, D.A.2    Bailey, L.G.3
  • 14
    • 0032892582 scopus 로고    scopus 로고
    • Submission and retrieval of an aligned set of nucleic acid sequences
    • Brawley, S.H. 1999. Submission and retrieval of an aligned set of nucleic acid sequences. J. Phycol. 35: 433-437.
    • (1999) J. Phycol. , vol.35 , pp. 433-437
    • Brawley, S.H.1
  • 15
    • 0031035491 scopus 로고    scopus 로고
    • The evolution of ribosomal DNA: Divergent paralogues and phylogenetic implications
    • Buckler, E.S., IV, Ippolito, A., and Holtsford, T.P. 1997. The evolution of ribosomal DNA: divergent paralogues and phylogenetic implications. Genetics, 145: 821-832.
    • (1997) Genetics , vol.145 , pp. 821-832
    • Buckler IV, E.S.1    Ippolito, A.2    Holtsford, T.P.3
  • 17
    • 0001678358 scopus 로고
    • The genomic system of classification as a guide to intergeneric hybridization with the perennial Triticeae
    • Edited by J.P. Gustafson. Plenum Publishing Corporation, New York
    • Dewey, D.R. 1984. The genomic system of classification as a guide to intergeneric hybridization with the perennial Triticeae. In Gene manipulation in plant improvement. Edited by J.P. Gustafson. Plenum Publishing Corporation, New York. pp. 209-279.
    • (1984) Gene Manipulation in Plant Improvement , pp. 209-279
    • Dewey, D.R.1
  • 18
    • 0001027766 scopus 로고
    • Statistical inference of phylogenies
    • with discussion
    • Felsenstein, J. 1983. Statistical inference of phylogenies (with discussion). J. R. Stat. Soc. Ser. A, 146: 246-272.
    • (1983) J. R. Stat. Soc. Ser. A , vol.146 , pp. 246-272
    • Felsenstein, J.1
  • 19
    • 0040126598 scopus 로고
    • The statistical approach to inferring evolutionary trees and what it tells us about parsimony and compatibility
    • Edited by T. Duncan and T.F. Stuessy. Columbia University Press, New York, N.Y.
    • Felsentein, J. 1984. The statistical approach to inferring evolutionary trees and what it tells us about parsimony and compatibility. In Cladistics: perspectives on the reconstruction of evolutionary history. Edited by T. Duncan and T.F. Stuessy. Columbia University Press, New York, N.Y.
    • (1984) Cladistics: Perspectives on the Reconstruction of Evolutionary History
    • Felsentein, J.1
  • 20
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 21
    • 0347964679 scopus 로고
    • Grunderkenntnisse und Grundbegriffe der Vererbungswissenschat, Hamburg
    • Heilbronn, A., and Kosswig, C. 1966. Principia genetica. 2nd ed. Grunderkenntnisse und Grundbegriffe der Vererbungswissenschat, Hamburg.
    • (1966) Principia Genetica. 2nd Ed.
    • Heilbronn, A.1    Kosswig, C.2
  • 22
    • 0020286044 scopus 로고
    • Branch and bound algorithms to determine minimal evolutionary trees
    • Hendy, M.D., and Penny, D. 1982. Branch and bound algorithms to determine minimal evolutionary trees. Math. Biosci. 59: 277-290.
    • (1982) Math. Biosci. , vol.59 , pp. 277-290
    • Hendy, M.D.1    Penny, D.2
  • 24
    • 0000764225 scopus 로고
    • Conspectus of the Triticeae
    • Löve, Á. 1984. Conspectus of the Triticeae. Feddes Repert. 95: 425-521.
    • (1984) Feddes Repert. , vol.95 , pp. 425-521
    • Löve, Á.1
  • 26
    • 0026691181 scopus 로고
    • Differentiation of the SY genomes in Asiatic Elymus
    • Lu, B.-R., and Salomon, B. 1992. Differentiation of the SY genomes in Asiatic Elymus. Hereditas, 116: 121-126.
    • (1992) Hereditas , vol.116 , pp. 121-126
    • Lu, B.-R.1    Salomon, B.2
  • 29
    • 0000347343 scopus 로고
    • Consensus indices for comparing classifications
    • Rohlf, F.J. 1982. Consensus indices for comparing classifications. Math. Biosci. 59: 131-144.
    • (1982) Math. Biosci. , vol.59 , pp. 131-144
    • Rohlf, F.J.1
  • 30
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 0000825481 scopus 로고
    • A statistical method for evaluating systematic relationships
    • Sokal, R.R., and Michener, C.D. 1958. A statistical method for evaluating systematic relationships. Univ. Kans. Sci. Bull. 38: 1409-1438.
    • (1958) Univ. Kans. Sci. Bull. , vol.38 , pp. 1409-1438
    • Sokal, R.R.1    Michener, C.D.2
  • 32
    • 0002471149 scopus 로고
    • The comparison of dendrograms by objective methods
    • Sokal, R.R., and Rohlf, F.J. 1981. The comparison of dendrograms by objective methods. Taxon, 11: 33-40.
    • (1981) Taxon , vol.11 , pp. 33-40
    • Sokal, R.R.1    Rohlf, F.J.2
  • 33
    • 0030411196 scopus 로고    scopus 로고
    • A study of 28 Elymus species using repetitive DNA sequences
    • Svitashev, S., Salomon, B., Bryngelsson, T., and Bothmer, R. von. 1996. A study of 28 Elymus species using repetitive DNA sequences. Genome, 39: 1093-1101.
    • (1996) Genome , vol.39 , pp. 1093-1101
    • Svitashev, S.1    Salomon, B.2    Bryngelsson, T.3    Von Bothmer, R.4
  • 35
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., and Gibson, T.J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 38
    • 0026652321 scopus 로고
    • Kengyilia: Synopsis and key to species
    • Yang, J.L., Yen, C., and Baum, B.R. 1992. Kengyilia: synopsis and key to species. Hereditas, 116: 25-28.
    • (1992) Hereditas , vol.116 , pp. 25-28
    • Yang, J.L.1    Yen, C.2    Baum, B.R.3
  • 39
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains; nucleotide sequence of M13mp18 and pUC19 vectors
    • Yanisch-Perron, C., Vieira, J., and Messing, J. 1985. Improved M13 phage cloning vectors and host strains; nucleotide sequence of M13mp18 and pUC19 vectors. Gene, 33: 103-119.
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.