Integration of animal linkage and BAC contig maps using overgo hybridization

Cytogenetic and Genome Research

Volumn 102, Issue 1-4, 2003, Pages 277-281

  Romanov, M N ^a   Price, J A ^a   Dodgson, J B ^a  

^a MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG;

ARTICLE; CHICKEN; CLONE; CONTROLLED STUDY; ERROR; GENE MAPPING; GENE SEQUENCE; GENETIC LINKAGE; GENOME; HYBRIDIZATION; MELTING POINT; MOLECULAR PROBE; NONHUMAN; PRIORITY JOURNAL; SEQUENCE TAGGED SITE;

ANIMALS; CHICKENS; CHROMOSOMES; CHROMOSOMES, ARTIFICIAL, BACTERIAL; CONTIG MAPPING; EXPRESSED SEQUENCE TAGS; GENETIC MARKERS; LINKAGE (GENETICS); MICROSATELLITE REPEATS; NUCLEIC ACID HYBRIDIZATION; PHYSICAL CHROMOSOME MAPPING; POLYMORPHISM, SINGLE NUCLEOTIDE;

ANIMALIA; GALLUS GALLUS;

EID: 0346445382     PISSN: 14248581     EISSN: None     Source Type: Journal    
DOI: 10.1159/000075763     Document Type: Article

References (13)

1. Cai WW, Reneker J, Chow CW, Vaishnav M, Bradley A: An anchored framework BAC map of mouse chromosome 11 assembled using multiplex oligonucleotide hybridization. Genomics 54:387-397 (1998).
2. Crooijmans RPMA, Vrebalov J, Dijkhof RJM, van der Poel JJ, Groenen MAM: Two-dimensional screening of the Wageningen chicken BAC library. Mammal Genome 11:360-363 (2000).
3. Crooijmans R, Dijkhof R, Aerts J, Hemmatien K, Cornelissen S, Veenendaal T, van der Poel J, Groenen, M: A sequence ready BAC map of chicken chromosome 10, in Proceedings of the International Plant and Animal Genome XI Conference, p 225 (San Diego, 2003).
4. Green ED: Strategies for the systematic sequencing of complex genomes. Nature Rev Genet 2:573-583 (2001).
5. Groenen MAM, Cheng HH, Bumstead N, Benkel B, Briles E, Burt DW, Burke T, Dodgson J, Hillel J, Lamont S, Ponce de Leon FA, Smith G, Soller M, Takahashi H, Vignal A: A consensus linkage map of the chicken genome. Genome Res 10:137-147 (2000).
6. Hoskins RA, Nelson CR, Berman BP, Laverty TR, George RA, Ciesiolka L, Naeemuddin M, Arenson AD, Durbin J, David RG, Tabor PE, Bailey MR, DeShazo DR, Catanese J, Mammoser A, Osoegawa K, de Jong PJ, Celniker SE, Gibbs RA, Rubin GM, Scherer, SE: A BAC-based physical map of the major autosomes of Drosophila melanogaster. Science 287:2271-2274 (2000).
7. Lee MK, Ren CW, Yan B, Cox B, Zhang HB, Romanov MN, Sizemore FG, Suchyta SP, Peters E, Dodgson JB: Construction and characterization of three BAC libraries for analysis of the chicken genome. Animal Genet 34:151-152 (2003).
8. Okimoto R, Cheng HH, Dodgson JB: Characterization of CR1 repeat random PCR markers for mapping the chicken genome. Animal Genet 28:139-145 (1997).
9. Paton IR, Smith J, Burt DW: Chicken syndecan-4 (SDC4) maps to linkage group E32E47W24. Animal Genet 34:237-238 (2003).
10. Ren CW, Lee MK, Yan B, Ding K, Cox B, Romanov MN, Price JA, Dodgson JB, Zhang HB: A BACbased physical map of the chicken genome. Genome Res, in press (2003).
11. Ross MT, LaBrie S, McPherson J, Stanton VP: Screening large-insert libraries by hybridization, in Dracopoli NC, Haines JL, Korf BR, Moir DT, Morton CC, Seidman CE, Seidman JG, Smith DR (eds): Current Protocols in Human Genetics, pp 5.6.1-5.6.52 (John Wiley and Sons, New York 1999).
12. Schmid M, Nanda I, Guttenbach M, Steinlein C, Hoehn M, Schartl M, Haaf T, Weigend S, Fries R, Buerstedde JM, Wimmers K, Burt DW, Smith J, A'Hara S, Law A, Griffin DK, Bumstead N, Kaufman J, Thomson PA, Burke T, Groenen MA, Crooijmans RP, Vignal A, Fillon V, Morisson M, Pitel F, Tixier-Boichard M, Ladjali-Mohammedi K, Hillel J, Mäki-Tanila A, Cheng HH, Delany ME, Burnside J, Mizuno S: First report on chicken genes and chromosomes 2000. Cytogenet Cell Genet 90:169-218 (2000).
13. Suchyta SP, Cheng HH, Burnside J, Dodgson JB: Comparative mapping of chicken anchor loci orthologous to genes on human chromosomes 1, 4 and 9. Animal Genet 32:12-18 (2001).