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Volumn 41, Issue 2, 2004, Pages 226-238

Phylogenetic analysis of globally distributed Mycosphaerella graminicola populations based on three DNA sequence loci

Author keywords

DNA sequence loci; Fungal population phylogenetics; Neutral mutations; Recombination

Indexed keywords

ACTIN; BETA TUBULIN; FUNGAL DNA;

EID: 0346094469     PISSN: 10871845     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.fgb.2003.09.006     Document Type: Article
Times cited : (53)

References (34)
  • 1
    • 0029186685 scopus 로고
    • Host-pathogen relationship of geographically diverse isolates of Septoria tritici and wheat cultivars
    • Ahmed H.U., Mundt C.C., Coakley S.M. Host-pathogen relationship of geographically diverse isolates of Septoria tritici and wheat cultivars. Plant Pathol. 44:1995;838-847.
    • (1995) Plant Pathol. , vol.44 , pp. 838-847
    • Ahmed, H.U.1    Mundt, C.C.2    Coakley, S.M.3
  • 3
    • 0035836728 scopus 로고    scopus 로고
    • Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach
    • Beerli P., Felsenstein J. Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proc. Natl. Acad. Sci. USA. 98:2001;4558-4562.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 4558-4562
    • Beerli, P.1    Felsenstein, J.2
  • 4
    • 11944257314 scopus 로고
    • Ancestral areas - A cladistic reinterpretation of the center of origin concept
    • Bremer K. Ancestral areas - a cladistic reinterpretation of the center of origin concept. Syst. Biol. 41:1992;436-445.
    • (1992) Syst. Biol. , vol.41 , pp. 436-445
    • Bremer, K.1
  • 6
    • 0033017973 scopus 로고    scopus 로고
    • A method for designing primer sets for speciation studies in filamentous ascomycetes
    • Carbone I., Kohn L.M. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia. 91:1999;553-556.
    • (1999) Mycologia , vol.91 , pp. 553-556
    • Carbone, I.1    Kohn, L.M.2
  • 7
    • 0035046735 scopus 로고    scopus 로고
    • A microbial population-species interface: Nested cladistic and coalescent inference with multilocus data
    • Carbone I., Kohn L.M. A microbial population-species interface: nested cladistic and coalescent inference with multilocus data. Mol. Ecol. 10:2001;947-964.
    • (2001) Mol. Ecol. , vol.10 , pp. 947-964
    • Carbone, I.1    Kohn, L.M.2
  • 8
    • 0029976261 scopus 로고    scopus 로고
    • Sexual reproduction plays a major role in the genetic structure of populations of the fungus Mycosphaerella graminicola
    • Chen R.-S., McDonald B.A. Sexual reproduction plays a major role in the genetic structure of populations of the fungus Mycosphaerella graminicola. Genetics. 142:1996;1119-1127.
    • (1996) Genetics , vol.142 , pp. 1119-1127
    • Chen, R.-S.1    McDonald, B.A.2
  • 9
    • 0033027847 scopus 로고    scopus 로고
    • The zoogeography and centers of origin of the crayfish subgenus Procericambarus (Decapoda: Cambaridae)
    • Crandall K.A., Templeton A.R. The zoogeography and centers of origin of the crayfish subgenus Procericambarus (Decapoda: Cambaridae). Evolution. 53:1999;123-134.
    • (1999) Evolution , vol.53 , pp. 123-134
    • Crandall, K.A.1    Templeton, A.R.2
  • 11
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu Y.X., Li W.H. Statistical tests of neutrality of mutations. Genetics. 133:1993;693-709.
    • (1993) Genetics , vol.133 , pp. 693-709
    • Fu, Y.X.1    Li, W.H.2
  • 12
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • Fu Y.X. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics. 147:1997;915-925.
    • (1997) Genetics , vol.147 , pp. 915-925
    • Fu, Y.X.1
  • 13
    • 0031940433 scopus 로고    scopus 로고
    • Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus
    • Geiser D.M., Pitt J.I., Taylor J.W. Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus. Proc. Natl. Acad. Sci. USA. 95:1998;388-393.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 388-393
    • Geiser, D.M.1    Pitt, J.I.2    Taylor, J.W.3
  • 14
    • 0035453450 scopus 로고    scopus 로고
    • Phylogenetic analyses of the ITS region of ribosomal DNA reveal that Septoria passerinii from barley is closely related to the wheat pathogen Mycosphaerella graminicola
    • Goodwin S.B., Zismann V.L. Phylogenetic analyses of the ITS region of ribosomal DNA reveal that Septoria passerinii from barley is closely related to the wheat pathogen Mycosphaerella graminicola. Mycologia. 93:2001;934-946.
    • (2001) Mycologia , vol.93 , pp. 934-946
    • Goodwin, S.B.1    Zismann, V.L.2
  • 16
    • 34548452457 scopus 로고
    • Simulating probability distributions in the coalescent
    • Griffiths R.C., Tavaré S. Simulating probability distributions in the coalescent. Theor. Popl. Biol. 46:1994;131-159.
    • (1994) Theor. Popl. Biol. , vol.46 , pp. 131-159
    • Griffiths, R.C.1    Tavaré, S.2
  • 18
    • 0344500827 scopus 로고    scopus 로고
    • Is selection responsible for the low level of variation in the last intron of the ZFY locus?
    • Jaruzelska J., Zietkiewicz E., Labuda D. Is selection responsible for the low level of variation in the last intron of the ZFY locus? Mol. Biol. Evol. 16:1999;1633-1640.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1633-1640
    • Jaruzelska, J.1    Zietkiewicz, E.2    Labuda, D.3
  • 19
    • 0032029052 scopus 로고    scopus 로고
    • Random association among alleles in clonal populations of Sclerotinia sclerotium
    • Kohli Y., Kohn L.M. Random association among alleles in clonal populations of Sclerotinia sclerotium. Fung. Genet. Biol. 23:1998;139-149.
    • (1998) Fung. Genet. Biol. , vol.23 , pp. 139-149
    • Kohli, Y.1    Kohn, L.M.2
  • 20
    • 0030995435 scopus 로고    scopus 로고
    • Concordance of gene genealogies reveals reproductive isolation in the pathogenic fungus Coccidiodes immitis
    • Koupankou V., Burt A., Taylor J.W. Concordance of gene genealogies reveals reproductive isolation in the pathogenic fungus Coccidiodes immitis. Proc. Natl. Acad. Sci. USA. 94:1997;5478-5482.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 5478-5482
    • Koupankou, V.1    Burt, A.2    Taylor, J.W.3
  • 21
    • 0036723575 scopus 로고    scopus 로고
    • Population structure of Mycosphaerella graminicola: From lesions to continents
    • Linde C., Zhan J., McDonald B.A. Population structure of Mycosphaerella graminicola: from lesions to continents. Phytopathology. 92:2002;946-955.
    • (2002) Phytopathology , vol.92 , pp. 946-955
    • Linde, C.1    Zhan, J.2    McDonald, B.A.3
  • 22
    • 0000853792 scopus 로고
    • DNA restriction fragment length polymorphisms among Mycosphaerella graminicola (anamorph Septoria tritici) isolates collected from a single wheat field
    • McDonald B.A., Martinez J.P. DNA restriction fragment length polymorphisms among Mycosphaerella graminicola (anamorph Septoria tritici) isolates collected from a single wheat field. Phytopathology. 80:1990;1368-1373.
    • (1990) Phytopathology , vol.80 , pp. 1368-1373
    • McDonald, B.A.1    Martinez, J.P.2
  • 23
    • 0030443904 scopus 로고    scopus 로고
    • The role of selection on the genetic structure of pathogen populations: Evidence from field experiments with Mycosphaerella graminicola on wheat
    • McDonald B.A., Mundt C.C., Chen R.-S. The role of selection on the genetic structure of pathogen populations: evidence from field experiments with Mycosphaerella graminicola on wheat. Euphytica. 92:1996;73-80.
    • (1996) Euphytica , vol.92 , pp. 73-80
    • McDonald, B.A.1    Mundt, C.C.2    Chen, R.-S.3
  • 24
    • 0002219624 scopus 로고    scopus 로고
    • The population genetics of Mycosphaerella graminicola and Phaeosphaeria nodorum
    • J.A. Lucas, P. Bowyer, & H.M. Anderson. Wallingford, UK: CABI
    • McDonald B.A., Zhan J., Yarden O., Hogan K., Garton J., Pettway R.E. The population genetics of Mycosphaerella graminicola and Phaeosphaeria nodorum. Lucas J.A., Bowyer P., Anderson H.M. Septoria on Cereals: A Study of Pathosystems. 1999;44-69 CABI, Wallingford, UK.
    • (1999) Septoria on Cereals: A Study of Pathosystems , pp. 44-69
    • McDonald, B.A.1    Zhan, J.2    Yarden, O.3    Hogan, K.4    Garton, J.5    Pettway, R.E.6
  • 25
    • 0033899763 scopus 로고    scopus 로고
    • Contrasting evolutionary histories of two introns of the Duchenne Muscular Dystrophy gene, Dmd, in humans
    • Nachman M.W., Crowell S.L. Contrasting evolutionary histories of two introns of the Duchenne Muscular Dystrophy gene, Dmd, in humans. Genetics. 155:2000;1855-1864.
    • (2000) Genetics , vol.155 , pp. 1855-1864
    • Nachman, M.W.1    Crowell, S.L.2
  • 26
    • 0034608827 scopus 로고    scopus 로고
    • Gene genealogies reveal global phylogeographic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab
    • O'Donnell K., Kistler C., Tacke B.K., Casper H.H. Gene genealogies reveal global phylogeographic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab. Proc. Natl. Acad. Sci. USA. 97:2000;7905-7910.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 7905-7910
    • O'Donnell, K.1    Kistler, C.2    Tacke, B.K.3    Casper, H.H.4
  • 27
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
    • Rozas J., Rozas R. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics. 15:1999;174-175.
    • (1999) Bioinformatics , vol.15 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 28
    • 84890336961 scopus 로고    scopus 로고
    • Sunderland, MA: Sinauer Associates
    • Swofford D.L. PAUP version 4.0. 2001;Sinauer Associates, Sunderland, MA.
    • (2001) PAUP version 4.0
    • Swofford, D.L.1
  • 29
    • 0021066244 scopus 로고
    • Evolutionary relationship of DNA sequences in finite populations
    • Tajima F. Evolutionary relationship of DNA sequences in finite populations. Genetics. 105:1983;437-460.
    • (1983) Genetics , vol.105 , pp. 437-460
    • Tajima, F.1
  • 30
    • 0029058158 scopus 로고
    • Separating population structure from population history: A cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the Tiger Salamander, Ambystoma tigrinum
    • Templeton A.R., Routman E., Phillips C.A. Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the Tiger Salamander, Ambystoma tigrinum. Genetics. 140:1995;767-782.
    • (1995) Genetics , vol.140 , pp. 767-782
    • Templeton, A.R.1    Routman, E.2    Phillips, C.A.3
  • 31
    • 0032441688 scopus 로고    scopus 로고
    • Principles of phylogeography as illustrated by freshwater and terrestrial turtles in the southeastern United States
    • Walker D., Avise J.C. Principles of phylogeography as illustrated by freshwater and terrestrial turtles in the southeastern United States. Annu. Rev. Ecol. Syst. 29:1998;23-58.
    • (1998) Annu. Rev. Ecol. Syst. , vol.29 , pp. 23-58
    • Walker, D.1    Avise, J.C.2
  • 32
    • 0029783144 scopus 로고    scopus 로고
    • Topiary pruning and weighting reinforce an African origin for the human mitochondrial DNA tree
    • Wills C. Topiary pruning and weighting reinforce an African origin for the human mitochondrial DNA tree. Evolution. 50:1996;977-989.
    • (1996) Evolution , vol.50 , pp. 977-989
    • Wills, C.1
  • 33
    • 0031731055 scopus 로고    scopus 로고
    • Measuring immigration and sexual reproduction in field populations of Mycosphaerella graminicola
    • Zhan J., Mundt C.C., McDonald B.A. Measuring immigration and sexual reproduction in field populations of Mycosphaerella graminicola. Phytopathology. 88:1998;1330-1337.
    • (1998) Phytopathology , vol.88 , pp. 1330-1337
    • Zhan, J.1    Mundt, C.C.2    McDonald, B.A.3
  • 34
    • 0037383062 scopus 로고    scopus 로고
    • The global genetic structure of the wheat pathogen Mycosphaerella graminicola is characterized by high nuclear diversity, low mitochondrial diversity, regular recombination, and gene flow
    • Zhan J., Pettway R.E., McDonald B.A. The global genetic structure of the wheat pathogen Mycosphaerella graminicola is characterized by high nuclear diversity, low mitochondrial diversity, regular recombination, and gene flow. Fung. Genet. Biol. 38:2003;286-297.
    • (2003) Fung. Genet. Biol. , vol.38 , pp. 286-297
    • Zhan, J.1    Pettway, R.E.2    McDonald, B.A.3


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