SSCP polymorphism within a promoter of the bovine alpha S1 casein gene

Journal of Animal and Feed Sciences

Volumn 9, Issue 1, 2000, Pages 73-79

  Kaminski S ^a   Jozefowicz S ^a  

^a UNIVERSITY OF WARMIA AND MAZURY IN OLSZTYN   (Poland)

Author keywords

Alpha S1 casein; Cattle; Polymorphism; SSCP

Indexed keywords

EID: 0346044486     PISSN: 12301388     EISSN: None     Source Type: Journal    
DOI: 10.22358/jafs/68030/2000     Document Type: Article

References (26)

1. Bleck G.T., Bremel R.D., 1993a. Sequence and single-base polymorphisms of the bovine alfa-lactalbumin 5'-flanking region. Gene 126, 213-218
2. Bleck G.T., Bremel R.D., 1993b. Correlation of the alpha-lactalbumin (+15) polymorphism to milk production and milk composition of Holstein. J. Dairy Sci. 76, 2292-2298
3. Erhardt G., 1993. A new alfa S1 casein allele in bovine milk and its occurrence in different breeds. Anim. Genet. 24, 65-66
4. Fox P.F., 1992. Advanced Dairy Chemistry. Volume 1. Proteins. Elsevier Science Publishers Ltd., London and New York
5. Grant D.J., Maeda N., 1993. A base substitution in the promoter associated with the human haptoglobin 2-I-modified phenotype decreases transcriptional activity and responsiveness to interleukin -6 in human hepatoma cells. Amer. J. Hum. Genet. 52, 974-980
6. Hayashi S., Watanabe J., Kawajiri K., 1991. Genetic polymorphisms in the 5' flanking region change transcriptional regulation of the human cytochrome P450IIE1 gene. J. Biochem. 110, 559-565
7. Kamiński S., 1996. Dde I RFLP at the 5' region of bovine kappa-casein gene. J. Appl. Genet. 37, 173-178
8. Kamiński S., 1999. Identification of Sdu I polymorphism within 5' flanking region of bovine alpha-lactalbumin gene. Anim. Sci. Pap. Rep. 17, 23-27
9. Kamiński S., Zabolewicz T., 1998. SSCP polymorphism within 5' region of bovine beta-lactoglobulin (LGB) gene. J. Appl. Genet. 39, 97-102
10. Knight J.C., Udalova I., Hill A.V.S., Greenwood B.M., Peshu N., Marsh K., Kwiatkowski D., 1999. A polymorphism that affects OCT-1 binding to the TNF promoter region is associated with severe malaria. Nat. Genet. 22, 145-150
11. Koczan D., Hobom G., Seyfert H.M., 1991. Genomic organisation of the bovine alpha S1 casein gene. Nucl. Acid Res. 19, 5591-5596
12. Koczan D., Hobom G., Seyfert H.M., 1993. Characterisation of the bovine alpha S1 casein gene C-allele based on a Mae III polymorphism. Anim. Genet. 24, 74
13. Lee H., Morse S., Olsvik Q., 1997. Nucleic Acid Amplification Technologies. Biotechniques Books. Eaton Publishing, pp. 54-55
14. Lewin B., 1997. Genes VI Oxford University Press, Oxford
15. Lien S., Gomez-Raya L., Steine T., Fimland E., Rogne S., 1995. Associations between casein haplotypes and milk yield traits. J. Dairy Sci. 78, 2047-2056
16. Lipkin E., Shalom A., Khatib H., Soller M., Friedmann A., 1993. Milk as a source of deoxyrybonucleic acid and as a substarte for the polymerase chain reaction. J. Dairy Sci. 76, 2025-2032
17. Lum L.S., Dově P., Medrano F.J., 1997. Polymorphism in bovine β-lactoglobulin promoter and differences in the binding affinity of activator protein-2 transcription factor. J. Dairy Sci. 80, 1389-1397
18. Orita M., Iwahara H., Kanazawa H., Hayashi K., Sekiya T., 1989. Detections of polymorphisms of human DNA by gel electrophoresis as single-strand conformation polymorphisms. Proc. Nat. Acad. Sci. USA 86, 2766-2770
19. Perez M.J., Leroux CH., Bonastre A.S., Martin P., 1994. Occurrance of a LINE sequence in the 3' UTR of the goat alpha S1 casein E encoding allele associated with reduced protein synthesis level. Gene 147, 179-187
20. Papavassiliou A., 1997. Transcription Factors in Eucariyotes. Springer-Verlag, Heidelberg (Germany)
21. Rijnkels M., Kooiman P.M., de Boer H.A., Pieper F.R., 1997. Organisation of the bovine casein gene locus. Mamm. Genome 8, 148-152
22. Sheffield V.C., Beck J.S., Kwitek A.E., Sandstrom D.W., Stone E.M., 1993. The sensitivity of single-strand conformation polymorphism analysis for the detection of single base substitutions. Genomics 16, 325-332
23. Schild T.A., Wagner V., Geldermann H., 1994. Variants within the 5'-flanking regions of bovine milk protein genes; k-casein encoding gene. Theor. Appl. Genet. 89, 116-120
24. Tadashi H., Buzard G.S., Calvert L.J., Weghorst C.M., 1993. "Cold SSCP": a simple, rapid and non-radioactive method for optimized single-strand conformation polymorphism analyses. Nucl. Acid Res. 21, 3637-3642
25. Velmala R., Mantysaari E.A., Maki-Tanila A., 1995. Casein haplotypes and their association with milk production traits in the Finnish Ayrshire cattle. Anim. Genet. 26, 419-425
26. Wagner V.A., Schild T.A., Geldermann H., 1994. DNA variants within the 5'-flanking region of milk-protein-encoding genes. II. The β-lactoglobulin-encoding gene. Theor. Appl. Genet. 89, 121-126