Distribution of the rubredoxin gene among the Clostridium butyricum species

Current Microbiology

Volumn 38, Issue 5, 1999, Pages 264-267

  Gérard, Philippe ^a   Amine, Jamal ^b   Raval, Guy ^a   Petitdemange, Henri ^a  

^a UNIVERSITÉ DE LORRAINE   (France)

^b FACULTÉ DES SCIENCES   (Morocco)

Author keywords

[No Author keywords available]

Indexed keywords

RUBREDOXIN;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL GENE; CLOSTRIDIUM BUTYRICUM; GENE FREQUENCY; GENE ISOLATION; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; CLONING, MOLECULAR; CLOSTRIDIUM; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; POLYMERASE CHAIN REACTION; RUBREDOXINS;

BACTERIA (MICROORGANISMS); CLOSTRIDIA; CLOSTRIDIUM BUTYRICUM; POSIBACTERIA; PROKARYOTA;

EID: 0345621641     PISSN: 03438651     EISSN: None     Source Type: Journal    
DOI: 10.1007/PL00006799     Document Type: Article

References (30)

1. Bachmayer H, Benson AM, Yasunobu KT, Garrard WT, Whiteley HR (1968a) Non-heme iron proteins. IV. Structural studies of Micrococcus aerogenes rubredoxin. Biochemistry 7:968-996
2. Bachmayer H, Peel JL, Yasunobu KT, Mayhew SG (1968b) Non-heme iron proteins. V. The amino acid sequence of rubredoxin from Peptostreptococcus elsdenii. J Biol Chem 243:1024-1032.
3. Biebl H, Pfenning N (1981) Isolation of members of the family Rhodospirillaceae. In: The prokaryotes. Berlin, Heidelberg, New York: Springer, pp 267-273
4. Blake PR, Park JB, Bryant FO, Aono S, Magnuson JK, Eccleston E, Howard JB, Summers MF, Adams MWW (1991) Determinants of protein hyperthermostability: purification and amino acid sequence of rubredoxin from the hyperthermophilic archaebacterium Pyrococcus furiosus and secondary structure of the zinc adduct by NMR. Biochemistry 30:10885-10895
5. Bruschi M (1976a) The amino acid sequence of rubredoxin from Desulfovibrio vulgaris. Biochim Biophys Acta 434:4-17
6. Bruschi M (1976b) The amino acid sequence of rubredoxin from the sulfate reducing bacterium, Desulfovibrio gigas. Biochem Biophys Res Commun 70:615-621
7. Cammack R (1992) Iron-sulfur clusters in enzymes: themes and variations. Adv Inorg Chem Iron-sulfur proteins 38:281-322
8. Chen L, Liu MY, LeGall J, Fareleira P, Santos H, Xavier AV (1993a) Purification and characterization of an NADH-rubredoxin oxidoreductase involved in the utilization of oxygen by Desulfovibrio gigas. Eur J Biochem 216:443-448
9. Chen L, Liu MY, LeGall J, Fareleira P, Santos H, Xavier AV (1993b) Rubredoxin oxidase, a new flavo-hemo-protein, is the site of oxygen reduction to water by the strict anaerobe Desulfovibrio gigas. Biochem Biophys Res Commun 193:100-105
10. Gomes CM, Silva G, Oliveira S, LeGall J, Liu MY, Xavier AV, Rodrigues-Pousadas C, Teixeira M (1997) Studies on the redox centers of the terminal oxidase from Desulfovibrio gigas and evidence for its interaction with rubredoxin. J Biol Chem 272: 22502-22508
11. Graves MC, Mullenbach GT, Rabinowitz JC (1985) Cloning and nucleotide sequence determination of the Clostridium pasteurianum ferredoxin gene. Proc Natl Acad Sci USA, 82:1653-1657
12. Hormel S, Walsh KA, Prickril BC, Titani K, Le Gall J, Sieker LC (1986) Amino acid sequence of rubredoxin from Desulfovibrio desulfuricans strain 27774. FEBS Lett 201:147-150
13. Lee WY, Brune DC, LoBrutto R, Blankenship RE (1995) Isolation, characterization, and primary structure of rubredoxin from the photosynthetic bacterium, Heliobacillus mobilis. Arch Biochem Biophys 318:80-88
14. Lovenberg W, Sobel BE (1965) Rubredoxin: a new electron transfer protein from Clostridium pasteurianum. Proc Natl Acad Sci USA 54:193-199
15. Mathieu I, Meyer J, Moulis JM (1992) Cloning, sequencing and expression in Escherichia coli of the rubredoxin gene from Clostridium pasteurianum. Biochem J 285:255-262
16. Mayhew SG (1971) Properties of two clostridial flavodoxins. Biochim Biophys Acta 235:276-288
17. Meyer J, Gagnon J, Sieker LC, Van Dorsselaer A, Moulis JM (1990) Rubredoxin from Clostridium thermosaccharolyticum. Amino acid sequence, mass-spectrometric and preliminary crystallographic data. Biochem J 271:839-841
18. Petitdemange H, Marczak R, Blusson H, Gay R (1979) Isolation and properties of reduced nicotinamide adenine dinucleotiderubredoxin oxidoreductase of Clostridium acetobutylicum. Biochem Biophys Res Commun 91:1258-1265
19. Petitdemange E, Durr C, Abbad Andaloussi S, Raval G (1995) Fermentation of raw glycerol to 1,3 propanediol by new strains of Clostridium butyricum. J Ind Microbiol 15:498-502
20. Ragsdale SW, Ljungdahl LG, DerVartanian DV (1983) Isolation of carbon monoxide dehydrogenase from Acetobacterium woodi and comparison of its properties with those of the Clostridium thermoaceticum enzyme. J Bacteriol 155:1224-1237
21. Saeki K, Jain MK, Shen GJ, Prince RC, Zeikus JG (1989a) Purification and properties of ferredoxin and rubredoxin from Butyribacterium methylotrophicum. J Bacteriol 171:4736-4741
22. Saeki K, Yao Y, Wakabayashi S, Shen GJ, Zeikus JG, Matsubara H (1989b) Ferredoxin and rubredoxin from Butyribacterium methylotrophicum: complete primary structures and construction of phylogenetic trees. J Biochem 106:656-662
23. Saito H, Miura KI (1963) Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72:619-629
24. nd ed. Cold Spring Harbor, N.Y: Cold Spring Harbor Laboratory Press
25. Seki S, Ikeda A, Ishimoto M (1988) Rubredoxin as an intermediary electron carrier for nitrate reduction by NAD(P)H in Clostridium perfringens. J Biochem 103:583-584
26. Seki Y, Seki S, Satoh M, Ikeda A, Ishimoto M (1989) Rubredoxin from Clostridium perfringens: complete amino acid sequence and participation in nitrate reduction. J Biochem 106:336-341
27. Shimizu F, Ogata M, Yagi T, Wakabayashi S, Matsubara H (1989) Amino acid sequence and function of rubredoxin from Desulfovibrio vulgaris Miyazaki. Biochimie 71:1171-1177
28. Voordouw G (1988) Cloning of genes encoding redox proteins of known amino acid sequence from a library of the Desulfovibrio vulgaris (Hildenborough) genome. Gene 69:75-83
29. Woodley KJ, Meyer TE (1987) The complete amino acid sequence of rubredoxin from the green phototrophic bacterium Chlorobium thiosulfatophilum strain PM. Eur J Biochem 163:161-166
30. Yasunobu KT, Tanaka M (1973) The types, distribution in nature, structure, and evolution data of the iron-sulfur proteins. In: Lovenberg W (eds) Iron sulfur proteins, vol. 2. New York: Academic Press, pp 27-130