Multiplex polymerase chain reaction for subgenus-specific detection of human adenoviruses in clinical samples

Journal of Medical Virology

Volumn 58, Issue 1, 1999, Pages 87-92

  Pring Åkerblom, Patricia ^a   Trijssenaar, F E John ^a   Adrian, T ^a   Hoyer, Hans ^a  

^a HANNOVER MEDICAL SCHOOL   (Germany)

Author keywords

Clinical applications; Epidemic keratoconjunctivitis; Gastroenteritis; Subgenus specific primers

Indexed keywords

COAT PROTEIN;

AGAR GEL ELECTROPHORESIS; ARTICLE; EPIDEMIC; FECES ANALYSIS; HUMAN; HUMAN ADENOVIRUS; KERATOCONJUNCTIVITIS; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; RESTRICTION MAPPING; THROAT CULTURE; VIRUS CHARACTERIZATION; VIRUS CLASSIFICATION; VIRUS DETECTION; VIRUS GENE; VIRUS TYPING;

ADENOVIRUS INFECTIONS, HUMAN; ADENOVIRUSES, HUMAN; BASE SEQUENCE; CAPSID; CAPSID PROTEINS; DNA PRIMERS; DNA, VIRAL; HUMANS; MOLECULAR SEQUENCE DATA; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, DNA;

ADENOVIRIDAE; DNA VIRUSES; HUMAN ADENOVIRUS;

EID: 0345332629     PISSN: 01466615     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1096-9071(199905)58:1<87::AID-JMV14>3.0.CO;2-R     Document Type: Article

References (38)

1. Adrian T, Wigand R, Richter J. 1987. Gastroenteritis in infants, associated with a genome type of adenovirus 31 and with combined rotavirus and adenovirus 31 infection. Eur J Pediatr 16:38-40.
2. Adrian T, Wolf U. 1989. Adenovirus 6 genome types: mapping of restriction site alterations on the genome. Res Virol 140:545-550.
3. Adrian T, Sassinek J, Wigand R. 1990. Genome type analysis of 480 isolates of adenovirus types 1, 2, and 5. Arch Virol 112:35-248.
4. Akusjärvi G, Aleström P, Pettersson M, Lager M, Jörnvall H, Pettersson U. 1984. The gene for the adenovirus 2 hexon polypeptide. J Biol Chem 259:13976-13979.
5. Allard A, Girones R, Juto P, Wadell G. 1990. Polymerase chain reaction for detection of adenoviruses in stool specimens. J Clin Microbiol 28:2659-2667.
6. Athapilly FK, Murali R, Rux JJ, Cai Z, Burnett RM. 1994. The refined crystal structure of hexon, the major coat protein of adenovirus type 2, at 2.9 Å resolution. J Mol Biol 242:430-455.
7. Bajanowski T, Wiegand P, Cecchi R, Pring-Åkerblom P, Adrian T, Jorch G, Brinkmann B. 1996. Detection and significance of adenoviruses in cases of sudden infant death. Virchows Arch 428:113-118.
8. Bennett FM, Law BB, Hamilton W, McDonald A. 1957. Adenovirus eye infections in Aberdeen. Lancet 2:670-673.
9. Boursnell MEG, Mautner V. 1981. Recombination in adenoviruses: crossover sites in intertypic recombinants are located in regions of homology. Virology 112:198-209.
10. Brandt CD, Kim HW, Rodriguez WJ, Arrobio JO, Jeffries BC, Stallings EP, Lewis C, Miles AJ, Gardner MK, Parrot RH. 1985. Adenovirus and pediatric gastroenteritis. J Infect Dis 151:437-443.
11. de Jong JC, Wigand R, Wadell G, Keller D, Muzerie CJ, Wermenbol AG, Schaap GJ. 1983. Adenovirus 37: identification and characterization of a medically important new adenovirus type of subgroup D. J Med Virol 7:105-118.
12. de Jong JC, Wermenbol AG, Verweij-Uijterwaal, MW. 1996. Adenoviruses from AIDS patients, including candidate serotypes 50 and 51 of subgenus B1 and D, respectively. Xth International Congress of Virology, Jerusalem, Israel, IUMS. PW48-4, p. 231.
13. Doerfler, W. 1969. Nonproductive infection of baby hamster kidney cells (BHK21) with adenovirus type 12. Virology 38:587-606.
14. Fox JP, Haall CE, Cooney MK. 1977. The Seattle virus watch. VII. Observations of adenovirus infections. Am J Epidemiol 105:362-386.
15. Guyer B, O'Day DM, Hierholzer JC, Schaffner W. 1975. Epidemic keratoconjunctivitis: a community outbreak of mixed adenovirus type 8 and 19 infection. J Infect Dis 132:142-150.
16. Hammond GW, Mauthe G, Joshua J, Hannan CK. 1985. Examination of uncommon clinical isolates of human adenoviruses by restriction endonuclease analysis. J Clin Microbiol 21:611-616.
17. Hierholzer JC, Adrian T, Anderson LJ, Wigand R, Gold JWM. 1988. Analysis of antigenically intermediate strains of subgenus B and D adenoviruses from Aids patients. Arch Virol 103:99-115.
18. Jackson R, Morris DJ, Cooper RJ, Bailey AS, Klapper PE, Cleator GM, Tullo AB. 1996. Multiplex polymerase chain reaction for adenovirus and herpes simplex virus in eye swabs. J Virol Methods 56:41-48.
19. Jawetz E, Kimura S, Nicholas AN, Thygeson P, Hanna L. 1955. New type of APC virus from keratoconjunctivitis. Science 122:1190-1192.
20. Kidd AH, Rosenblatt A, Besselaar TG, Erasmus MJ, Tiemessen CT, Berkowitz FE, Schoub BD. 1986. Characterization of rotaviruses and subgroup F adenoviruses from acute summer gastroenteritis in South Africa J Med Virol 18:159-168.
21. Kidd AH, Jönsson M, Garwicz D, Kajon AE, Wermenbol AG, Verweij MW, de Jong JC. 1996. Rapid subgenus identification of human adenovirus isolates by a general PCR. J Clin Microbiol 34:622-627
22. Kinchington PR, Turse SE, Kowalski, RP, Gordon YJ. 1994. Use of polymerase chain reaction for the detection of adenoviruses in ocular swab specimens. Invest Ophthalmol Vis Sci 35:4126-4134.
23. Kinloch R, Mackay N, Mautner V. 1984. Adenovirus hexon. Sequence comparison of subgroup C serotypes 2 and 5. J Biol Chem 259: 6431-6436.
24. Mei Y-F, Wadell G. 1993. Hemagglutination properties and nucleotide sequence analysis of the fiber gene of adenovirus genome types 11p and 11a. Virology 194:453-462.
25. Murray ES, Chang RS, Bell Jr SD, Tarizzo ML, Synder JC. 1957. Agents recovered from acute conjunctivitis cases in Saudi Arabia. Am J Ophthalmol 43:32-35.
26. Nötzel R, Adrian T, Wigand R, Wadell G. 1985. Characterization of hemaglutinin variant strains of adenovirus 15 and 9. Arch Virol 85:171-174.
27. Pring-Åkerblom P, Adrian T. 1994. Type- and group-specific polymerase chain reaction for adenovirus detection. Res Virol 145:25-35.
28. Pring-Åkerblom P, Adrian T. 1995. Characterization of adenovirus subgenus D fiber genes. Virology 206:564-571.
29. Pring-Åkerblom P, Trijssenaar FEJ, Adrian T. 1995a. Sequence characterization and comparison of adenovirus subgenus B and E hexons. Virology 212:232-236.
30. Pring-Åkerblom P, Trijssenaar FEJ, Adrian T. 1995b. Hexon sequence of adenovirus type 7 and comparison with other serotypes of subgenus B. Res Virol 146:383-388.
31. Pring-Åkerblom P, Adrian T, Köstler T. 1997. Polymerase chain reaction based detection and typing of human adenoviruses in clinical samples. Res Virol 148:225-231.
32. Sprengel J, Schmitz B, Heuss-Neitzel D, Zock C, Doerfler W. 1994. Nucleotide sequence of human adenovirus type 12 DNA: comparative functional analysis. J Virol 68:379-389.
33. Roberts MM, White JL, Grütter, MG, Burnett RM. 1986. Three-dimensional structure of the adenovirus major coat protein hexon. Science 232:1148-1151.
34. Toogood CIA, Hay RT. 1988. DNA sequence of the adenovirus type 41 hexon gene and predicted structure of the protein. J Gen Virol 69:2291-2301.
35. Toogood CIA, Murali R, Burnett RM, Ronald TH. 1989. The adenovirus type 40 hexon: sequence, predicted structure and relationship to other adenovirus hexons. J Gen Virol 70:3203-3214.
36. Uhnoo I, Wadell G, Svensson L, Johansson M. 1984. Two new serotypes of adenovirus causing infantile diarrhoea. Dev Biol Stand 53:311-318.
37. Wadell G. 1990. Adenoviruses. In: Zuckerman AJ, Banatvala JE, Pattison, JR, editors. Principles and practice of clinical virology. Chichester, UK: John Wiley & Sons, Ltd. p 267-287.
38. Wigand R. 1970. Adenoviruses types 20, 25, and 28: atypical members of group II. J Gen Virol 6:325-328.