Molecular characterization of four β-tubulin genes from dinitroaniline susceptible and resistant biotypes of Eleusine indica

Plant Molecular Biology

Volumn 39, Issue 1, 1999, Pages 45-61

  Yamamoto, Etsuo ^a   Baird, W Vance ^a  

^a CLEMSON UNIVERSITY   (United States)

Author keywords

tubulin; tubulin; Biotype; Dinitroaniline; Goosegrass (Eleusine indica); Isotype

Indexed keywords

ALPHA TUBULIN; AMINO ACID SUBSTITUTION; BENZIMIDAZOLE; BETA TUBULIN; BIOTYPE; CHLAMYDOMONAS REINHARDTII; COLCHICINE; DINITROANILINE; HERBICIDE RESISTANCE; INFLORESCENCE; MISSENSE MUTATION; NUCLEOTIDE SUBSTITUTION; POLYMERIZATION; SEQUENCE ANALYSIS;

AMINO ACID SEQUENCE; ANILINE COMPOUNDS; BASE SEQUENCE; CLONING, MOLECULAR; HERBICIDES; MOLECULAR SEQUENCE DATA; MUTATION, MISSENSE; PHYLOGENY; POACEAE; POLYMERASE CHAIN REACTION; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; SEQUENCE ALIGNMENT; TUBULIN;

CHLAMYDOMONAS REINHARDTII; ELEUSINE INDICA; EMBRYOPHYTA; FUNGI; POACEAE;

EID: 0344923760     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1006108412801     Document Type: Article

References (49)

1. Anthony RG, Walden TR, Ray JA, Bright SWJ, Hussey PJ: Herbicide resistance caused by spontaneous mutation of the cytoskeletal protein tubulin. Nature 393: 260-263 (1998).
2. Borck K, Braymer HD: The genetic analysis of resistance to benomyl in Neurospora crassa. J Gen Microbiol 85: 51-56 (1974).
3. Brunke KJ, Anthony JG, Sternberg EJ, Weeks DP: Repeated consensus sequence and pseudopromoters in the four coordinately regulated tubulin genes of Chlamydomonas reinhardtii. Mol Cell Biol 4: 1115-1124 (1984).
4. Caron J, Jones AL, Rail LB, Kirschner MW: Autoregulation of tubulin synthesis in enucleated cells. Nature 317: 648-650 (1985).
5. Chan MM, Fong D: Inhibition of leishmanias but not host macrophages by the antimicrotubulin herbicide trifluralin. Science 249: 924-926 (1990).
6. Chan MM, Grogl M, Chen C-C, Bienen EJ, Fong D: Herbicides to curb human parasitic infections: in vitro and in vivo effects of trifluralin on the trypanosomatid protozoans. Proc Natl Acad Sci USA 90: 5657-5661 (1993).
7. Chernicky JP: An Investigation into the Resistance of Goosegrass (Eleusine indica) to Dinitroaniline Herbicides. Ph. D. thesis, University of Illinois, Urbana-Champaign, IL (1985).
8. Cleveland DW: The multitubulin hypothesis revised: What have we learned? J Cell Biol 104: 381-383 (1987).
9. Davidse LC: Benzimidazole fungicides: mechanism of action and biological impact. Annu Rev Phytopath 24: 43-65 (1986).
10. Frohman MA, Dush MK, Martin GR: Rapid production of full-length cDNA from rare transcripts: amplification using a single-gene specific oligonucleotide primer. Proc Natl Acad Sci USA 85: 8998-9002 (1988).
11. Garnier J, Osguthorpe DJ, Robson B : Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J Mol Biol 120: 97-120 (1978).
12. Gossett BJ, Murdock E. Toler J: Resistance of palmer amaranth (Amaranthus palmeri) to the dinitroaniline herbicides. Weed Technol 6: 587-891 (1992).
13. Hacskayko J, Amato VA: Effect of trifluralin on roots of corn and cotton. Weed Sci 16: 513-515 (1968).
14. Hugdahl JD, Morejohn LC: Rapid and reversible high-affinity binding of the dinitroaniline herbicide oryzalin to tubulin from Zea mays L. Plant Physiol 102: 725-740 (1993).
15. Jasieniuk M, Brule-Babel AL, Morrison IN: Inheritance of trifluralin resistance in green foxtail (Sataria viridis). Weed Sci 42: 123-127 (1994).
16. John M: An efficient method for isolation of RNA and DNA from plants containing polyphenolics. Nucl Acids Res 20: 2381 (1992).
17. Jung MK, Oakley BR: Identification of an amino acid substitutions in the benA, β-tubulin gene of Aspergillus nidulans that confers thiabendazole resistance and benomyl supersensitivity. Cell Motil Cytoskel 17: 87-94 (1990).
18. Jung MK, Wilder IB, Oakley BR: Amino acid alterations in the benA β-tubulin) gene of Aspergillus nidulans that confer benomyl resistance. Cell Motil Cytoskel 22: 170-174 (1992).
19. Keifer AQ, Calaham DA, Hepler PK: Inhibitors of cell division and protoplasmic streaming fail to cause a detectable effect on intracellular calcium levels in stamen-hair cells of Tradiscantia virginiana L. Planta 186: 361-366 (1992).
20. Kwan MS, Veenstra JG, Roos MH: Molecular characterization of β-tubulin genes present in benzimidazole-resistant populations of Haemonchus contortus. Mol Biochem Parasitol 60: 133-144 (1993).
21. Kyte J, Doolittle RF: A simple method for displaying the hydropathic character of a protein. J Mol Biol 157: 105-132 (1982).
22. Lee VD, Huang B: Missense mutations at lysine 350 in β2-tubulin confer altered sensitivity to microtubule inhibitors in Chlamydomonas. Plant Cell 2: 1051-1057 (1990).
23. Li J, Katiyar SK, Edlind TD: Site-directed mutagenesis of Saccharomyces cerevisiae β-tubulin: interaction between residue 167 and benzimidazole compounds. FEBS Lett 385: 7-10 (1996).
24. Little M, Ludueña RF: Structural differences between brain β1- and β2-tubulins. Implications for microtubule assembly and colchicine binding. EMBO J 4: 51-56 (1985).
25. Mandelkow E-M, Herrmann M, Rühl U: Tubulin domains probed by limited proteolysis and subunit-specific antibodies. J Mol Biol 185: 311-327 (1985).
26. McAlister FM, Holtum JAM, Powles SB: Dinitroaniline herbicide resistance in rigid ryegrass (Lolium rigidum). Weed Sci 43: 55-62 (1995).
27. Morejohn LC: The molecular pharmacology of plant tubulin and microtubules. In: Lloyd C (ed) The Cytoskeletal Basis of Plant Growth and Form, pp. 29-43. Academic Press, London (1991).
28. Morejohn LC, Bureau T, Molé-Bajer J. Bajer AS, Fosket DE: Oryzalin, a dinitroaniline herbicide, binds to plant tubulin and inhibits microtubule polymerization in vitro. Planta 172: 252-264 (1987).
29. Mudge LC, Gossett BJ, Murphy TR: Resistance of goosegrass (Eleusine indica) to dinitroaniline herbicides. Weed Sci 32: 591-594 (1984).
30. Murthy JV, Kim H-H, Hanesworth VR, Hugdahl JD, Morejohn LC: Competitive inhibition of high-affinity oryzalin binding to plant tubulin by the phosphoric amide herbicide amiprophos-methyl. Plant Physiol 105: 309-320 (1994).
31. Mysore KK, Baird WV: Molecular characterization of the tubulin-related gene families in herbicide resistant and susceptible goosegrass (Eleusine indica). Weed Sci 43: 28-33 (1995).
32. Nogales E, Wolf SG, Downing KH: Structure of the αβ tubulin dimer by electron crystallography. Nature 391: 199-203 (1998).
33. Orbach MJ, Porro EB, Yanofsky C: Cloning and characterization of the gene for β-tubulin from a benomyl-resistant mutant of Neurospora crassa and its use as a dominant selectable marker. Mol Cell Biol 6: 2452-2461 (1986).
34. Pachter JS, Yen TJ, Cleveland DW: Autoregulation of tubulin expression is achieved through specific degradation of polysomal tubulin mRNAs. Cell 51: 283-292 (1987).
35. Quader H, Filner P: The action of antimitotic herbicides on flagellar regeneration in Chlamydomonas reinhardtii: a comparison with the action of colchicine. Eur J Cell Biol 21: 301-304 (1980).
36. Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1989).
37. R15 β-tubulin mutations in Chlamydomonas reinhardtii confer altered sensitivities to microtubule inhibitors and herbicides by enhancing microtubule stability. J Cell Biol 113: 605-614 (1991).
38. Stephens JC, Nei M: Phylogenetic analysis of polymorphic DNA sequences at the Adh locus in Drosophila melanogaster and its sibling species. J Mol Evol 22: 289-300 (1985).
39. Theodorakis NG, Cleveland DW: Physical evidence for cotranslational regulation of β-tubulin mRNA degradation. Mol Cell Biol 12: 791-799 (1992).
40. Thion L, Mazars C, Nacry P, Bouchez D, Moreau M, Rajeva R, Thuleau P: Plasma membrane depolarization-activated calcium channels, stimulated by microtubule-depolymerizing drugs in wild-type Arabidopsis thaliana protoplasts, display constitutively large activities and a longer half-life in ton2 mutant cells affected in the organization of cortical microtubules. Plant J 13: 603-610 (1998).
41. Thomas JH, Neff NF, Botstein D: Isolation and characterization of mutations in the β-tubulin gene of Saccharomyces cerevisiae. Genetics 112: 715-734 (1985).
42. Vaughn KC: Cytological studies of dinitroaniline-resistant Eleusine. Pestic Biochem Physiol 26: 66-74 (1986).
43. Vaughn KC, Vaughan MA: Structural and biochemical characterization of dinitroaniline-resistant Eleusine. In: Green MB, LeBaron HM, Moberg WK (eds) Managing Resistence to Agrochemicals: From Fundamental Research to Practical Strategies, pp. 364-375. American Chemical Society, Los Angeles (1990).
44. Vaughn KC, Vaughan MA, Gossett BJ: A biotype of goosegrass (Eleusine indica) with an intermediate level of dinitroaniline herbicide resistance. Weed Technol 4: 157-162 (1990).
45. Werth CR, Hilu K, Langner CA, Baird WV: Duplicate gene expression for isocitrate dehydrogenase and 6-phosphogluconate dehydrogenase in diploid species of Eleusine (Gramineae). Am J Bot 80: 705-710 (1993).
46. Yamamoto E, Zeng L, Baird WV: α-tubulins missense mutations correlate with antimicrotubule drug resistance in Eleusine indica. Plant Cell 10: 297-308 (1998).
47. Yen TJ, Gay DA, Pachter JS, Cleveland DW: Autoregulated changes in stability of poly some-bound β-tubulin mRNAs are specified by the first 13 translated nucleotides. Mol Cell Biol 8: 1224-1235 (1988).
48. Zeng L, Baird WW: Genetic basis of dinitroaniline herbicide resistance in a highly-resistant biotype of goosegrass (Eleusine indica). J Hered 88: 427-432 (1997).
49. Zeng L, Baird WV: Inheritance of resistance to anti-microtubule dinitroaniline herbicides in an 'intermediate' resistant biotype of Eleusine indica (Poaceae). Am J Bot, in press (1998).