-
1
-
-
0032512716
-
Prediction of splice sites in plant pre-mRNA from sequence properties
-
Brendel,V., Kleffe,J., Carle-Urioste,J.C. and Walbot,V. (1998) Prediction of splice sites in plant pre-mRNA from sequence properties. J. Mol. Biol., 276, 85-104.
-
(1998)
J. Mol. Biol.
, vol.276
, pp. 85-104
-
-
Brendel, V.1
Kleffe, J.2
Carle-Urioste, J.C.3
Walbot, V.4
-
2
-
-
0035312709
-
Comparison of intron-containing and intron-lacking human genes elucidates putative exonic splicing enhancers
-
Fedorov,A., Saxonov,S., Fedorova,L. and Daizadeh,I. (2001) Comparison of intron-containing and intron-lacking human genes elucidates putative exonic splicing enhancers. Nucleic Acids Res., 29, 1464-1469.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1464-1469
-
-
Fedorov, A.1
Saxonov, S.2
Fedorova, L.3
Daizadeh, I.4
-
3
-
-
0026647310
-
Prediction of gene structure
-
Guigo,R., Knudsen,S., Drake,N. and Smith,T. (1992) Prediction of gene structure. J. Mol. Biol., 226, 141-157.
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 141-157
-
-
Guigo, R.1
Knudsen, S.2
Drake, N.3
Smith, T.4
-
4
-
-
0023045731
-
The current status and portability of our sequence handling software
-
Staden,R. (1986) The current status and portability of our sequence handling software. Nucleic Acids Res., 14, 217-231.
-
(1986)
Nucleic Acids Res.
, vol.14
, pp. 217-231
-
-
Staden, R.1
-
5
-
-
0027377256
-
A weight array method for splicing signal analysis
-
Zhang,M.Q. and Marr,T.G. (1993) A weight array method for splicing signal analysis. Comp. Appl. Biol. Sci., 9, 499-509.
-
(1993)
Comp. Appl. Biol. Sci.
, vol.9
, pp. 499-509
-
-
Zhang, M.Q.1
Marr, T.G.2
-
6
-
-
0025744474
-
Prediction of human mRNA donor and acceptor sites from the DNA sequences
-
Brunak,S., Engelbrecht,J. and Knudsen,S. (1991) Prediction of human mRNA donor and acceptor sites from the DNA sequences. J. Mol. Biol., 220, 49-65.
-
(1991)
J. Mol. Biol.
, vol.220
, pp. 49-65
-
-
Brunak, S.1
Engelbrecht, J.2
Knudsen, S.3
-
7
-
-
0030869663
-
A method for identifying splice sites and translational start sites in eukaryotic mRNA
-
Salzberg,S.L. (1997) A method for identifying splice sites and translational start sites in eukaryotic mRNA. Comput. Appl. Biol. Sci., 13, 365-376.
-
(1997)
Comput. Appl. Biol. Sci.
, vol.13
, pp. 365-376
-
-
Salzberg, S.L.1
-
8
-
-
61649085735
-
Modeling dependencies in pre-mRNA splicing signals
-
Salzberg,S.L., Searls,D.B. and Kasif,S. (eds), Elsevier, Amsterdam
-
Burge,C.B. (1998) Modeling dependencies in pre-mRNA splicing signals. In Salzberg,S.L., Searls,D.B. and Kasif,S. (eds), Computational Method in Molecular Biology. Elsevier, Amsterdam, pp. 129-164.
-
(1998)
Computational Method in Molecular Biology
, pp. 129-164
-
-
Burge, C.B.1
-
9
-
-
0344289654
-
Modeling splicing sites with pairwise correlations
-
Arita,M., Tsuda,K. and Asai,K. (2002) Modeling splicing sites with pairwise correlations. Bioinformatics, 18, 1-8.
-
(2002)
Bioinformatics
, vol.18
, pp. 1-8
-
-
Arita, M.1
Tsuda, K.2
Asai, K.3
-
10
-
-
0031586003
-
Prediction of complete gene structures in human genomic DNA
-
Burge,C. and Karlin,S. (1997) Prediction of complete gene structures in human genomic DNA. J. Mol. Biol., 268, 78-94.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 78-94
-
-
Burge, C.1
Karlin, S.2
-
11
-
-
0034136782
-
Modeling splice sites with Bayes networks
-
Cai,D., Delcher,A., Kao,B. and Kasif,S. (2000) Modeling splice sites with Bayes networks. Bioinformatics, 16, 152-158.
-
(2000)
Bioinformatics
, vol.16
, pp. 152-158
-
-
Cai, D.1
Delcher, A.2
Kao, B.3
Kasif, S.4
-
12
-
-
0035282695
-
Genesplicer: A new computational method for splice site prediction
-
Pertea,M., Lin,X.Y. and Salzberg,S.L. (2001) Genesplicer: a new computational method for splice site prediction. Nucleic Acids Res., 29, 1185-1190.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1185-1190
-
-
Pertea, M.1
Lin, X.Y.2
Salzberg, S.L.3
-
13
-
-
0029791403
-
Splice site prediction in Arabidopsis thaliana Pre-mRNA by combining local and global sequence information
-
Hebsgaard,S.M., Korning,P.G., Tolstrup,N., Engelbrecht,J., Rouzé,P. and Brunak,S. (1996) Splice site prediction in Arabidopsis thaliana Pre-mRNA by combining local and global sequence information. Nucleic Acids Res., 24, 3439-3452.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 3439-3452
-
-
Hebsgaard, S.M.1
Korning, P.G.2
Tolstrup, N.3
Engelbrecht, J.4
Rouzé, P.5
Brunak, S.6
-
14
-
-
0345151940
-
-
Abstracts of Papers Presented at the 1999 Meeting on Genome Sequencing and Biology. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Hubbard,T., Birney,E., Bruskiewich,R., Clamp,M., Gilbert,J., King,A., Pocock,M. and Wilming,L. (1999) Abstracts of Papers Presented at the 1999 Meeting on Genome Sequencing and Biology. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1999)
-
-
Hubbard, T.1
Birney, E.2
Bruskiewich, R.3
Clamp, M.4
Gilbert, J.5
King, A.6
Pocock, M.7
Wilming, L.8
-
15
-
-
0028618270
-
Predicting internal exons by oligonucleotide composition and discriminant analysis of spliceable open reading frames
-
Solovyev,V.V., Aalamov,A.A. and Lawrence,C.B. (1994) Predicting internal exons by oligonucleotide composition and discriminant analysis of spliceable open reading frames. Nucleic Acids Res., 22, 5156-5163.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5156-5163
-
-
Solovyev, V.V.1
Aalamov, A.A.2
Lawrence, C.B.3
-
16
-
-
0030787520
-
Improved splice site detection in Genie
-
Reese,M.G., Eeckman,F.H., Kulp,D. and Haussler,D. (1997) Improved splice site detection in Genie. J. Comput. Biol., 4, 311-323.
-
(1997)
J. Comput. Biol.
, vol.4
, pp. 311-323
-
-
Reese, M.G.1
Eeckman, F.H.2
Kulp, D.3
Haussler, D.4
-
17
-
-
0344289655
-
EST/STS guides identification of genes in human genomic DNA
-
ISMB98 Poster, Montreal, Canada
-
Mache,N. and Levy,P. (1998) EST/STS guides identification of genes in human genomic DNA. ISMB98 Poster, Montreal, Canada.
-
(1998)
-
-
Mache, N.1
Levy, P.2
-
18
-
-
0345583805
-
GENIO - A non-redundant eukaryotic gene database of annotated sites and sequences
-
RECOMB-98 Poster, New York
-
Mache,N. W Levy,P. (1998) GENIO - A non-redundant eukaryotic gene database of annotated sites and sequences. RECOMB-98 Poster, New York.
-
(1998)
-
-
Mache, N.1
Mache, W.2
Levy, P.3
-
19
-
-
0030787856
-
Analysis of donor splice signals in different organisms
-
Rogozin,I.B. and Milanesi,L. (1997) Analysis of donor splice signals in different organisms. J. Mol. Evol., 45, 50-59.
-
(1997)
J. Mol. Evol.
, vol.45
, pp. 50-59
-
-
Rogozin, I.B.1
Milanesi, L.2
-
20
-
-
0033782834
-
An assessment of gene prediction accuracy in large DNA sequences
-
Guigo,R., Agarwal,P., Abril,J.F., Burset,M. and Fichett,J.M. (2000) An assessment of gene prediction accuracy in large DNA sequences. Genome Res., 10, 1631-1642.
-
(2000)
Genome Res.
, vol.10
, pp. 1631-1642
-
-
Guigo, R.1
Agarwal, P.2
Abril, J.F.3
Burset, M.4
Fichett, J.M.5
-
21
-
-
0036796369
-
Current methods of gene prediction, their strengths and weaknesses
-
Mathé,C., Sagot,M.F., Schiex,T. and Rouzé,P. (2002) Current methods of gene prediction, their strengths and weaknesses. Nucleic Acids Res., 30, 4103-4117
-
(2002)
Nucleic. Acids Res.
, vol.30
, pp. 4103-4117
-
-
Mathé, C.1
Sagot, M.F.2
Schiex, T.3
Rouzé, P.4
-
22
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
International Human Genome Sequencing Consortium
-
International Human Genome Sequencing Consortium (2001) Initial sequencing and analysis of the human genome. Nature, 409, 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
-
23
-
-
0027059264
-
Assessment of protein coding measures
-
Fickett,J.W. and Tung,C.S. (1992) Assessment of protein coding measures. Nucleic Acids Res., 20, 6441-6450.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 6441-6450
-
-
Fickett, J.W.1
Tung, C.S.2
-
24
-
-
0038726322
-
ORF organization and gene recognition in the yeast genome
-
Luo,L.F., Li,H. and Zhang,L.R.(2003) ORF organization and gene recognition in the yeast genome. Comp. Fuct. Genom., 4, 318-328.
-
(2003)
Comp. Fuct. Genom.
, vol.4
, pp. 318-328
-
-
Luo, L.F.1
Li, H.2
Zhang, L.R.3
-
25
-
-
0034069452
-
Gene-finding approaches for eukaryotes
-
Stormo,G.D. (2000) Gene-finding approaches for eukaryotes. Genome Res., 10, 394-397.
-
(2000)
Genome Res.
, vol.10
, pp. 394-397
-
-
Stormo, G.D.1
-
26
-
-
0018262333
-
The measure of diversity
-
Laxton,R.R. (1978) The measure of diversity. J. Theor. Biol., 71, 51-67.
-
(1978)
J. Theor. Biol.
, vol.71
, pp. 51-67
-
-
Laxton, R.R.1
-
27
-
-
0012744137
-
-
Science Press, Beijing, (in Chinese)
-
Xu,K.X. (1999) Biomathematics. Science Press, Beijing, pp. 277-296 (in Chinese).
-
(1999)
Biomathematics
, pp. 277-296
-
-
Xu, K.X.1
-
28
-
-
0035824718
-
The prediction of the structural class of protein: Application of the measure of diversity
-
Li,Q.Z. and Lu,Z.Q. (2001) The prediction of the structural class of protein: application of the measure of diversity. J. Theor. Biol., 213, 493-502.
-
(2001)
J. Theor. Biol.
, vol.213
, pp. 493-502
-
-
Li, Q.Z.1
Lu, Z.Q.2
-
29
-
-
0036962587
-
The recognition of protein structural class
-
(in Chinese)
-
Li,X.Q. and Luo,L.F. (2002) The recognition of protein structural class. Prog. Biochem. Biophys., 29, 938-941 (in Chinese).
-
(2002)
Prog. Biochem. Biophys.
, vol.29
, pp. 938-941
-
-
Li, X.Q.1
Luo, L.F.2
-
30
-
-
0036609602
-
Relationships between combination methods and measure of diversity in combining classifiers
-
Shipp,C.A. and Kuncheva,L.I. (2002) Relationships between combination methods and measure of diversity in combining classifiers. Inform. Fusion, 3, 135-148.
-
(2002)
Inform. Fusion
, vol.3
, pp. 135-148
-
-
Shipp, C.A.1
Kuncheva, L.I.2
-
31
-
-
0031027525
-
Identification of protein coding regions in the human genome by quadratic discriminant analysis
-
Zhang,M.Q. (1997) Identification of protein coding regions in the human genome by quadratic discriminant analysis. Proc. Natl Acad. Sci. USA, 94, 565-568.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 565-568
-
-
Zhang, M.Q.1
-
32
-
-
0033977982
-
EID: The exon-intron database - An exhaustive database of protein-coding intron-containing genes
-
Saxonov,S., Daizadeh,I., Fedorov,A. and Gilbert,W. (2000) EID: the exon-intron database - an exhaustive database of protein-coding intron-containing genes. Nucleic Acids Res., 28, 185-190.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 185-190
-
-
Saxonov, S.1
Daizadeh, I.2
Fedorov, A.3
Gilbert, W.4
-
33
-
-
0034238085
-
Finding borders between coding and noncoding DNA regions by an entropic segmentation method
-
Bernaola-Galván,P., Grosse,I., Carpena,P., Oliver,J.L., Román-Roldán,R. and Stanley,H.E. (2000) Finding borders between coding and noncoding DNA regions by an entropic segmentation method. Phys. Rev. Lett., 85, 1342-1345.
-
(2000)
Phys. Rev. Lett.
, vol.85
, pp. 1342-1345
-
-
Bernaola-Galván, P.1
Grosse, I.2
Carpena, P.3
Oliver, J.L.4
Román-Roldán, R.5
Stanley, H.E.6
|