Kinetics of the quinone binding reaction at the QB site of reaction centers from the purple bacteria Rhodobacter sphaeroides reconstituted in liposomes

European Journal of Biochemistry

Volumn 270, Issue 23, 2003, Pages 4595-4605

  Milano, Francesco ^a   Agostiano, Angela ^a,b   Mavelli, Fabio ^b   Trotta, Massimo ^a,c  

^a CNR   (Italy)

^b UNIVERSITY OF BARI   (Italy)

^c Ist Proc Chimico Fisici S   (Italy)

Author keywords

Liposomes; Photosynthesis; Quinone binding; Reaction center

Indexed keywords

BACTERIAL ENZYME; LIPOSOME; MEMBRANE ENZYME; UBIDECARENONE;

ARTICLE; BINDING KINETICS; ENZYME BINDING; ENZYME ISOLATION; ENZYME KINETICS; ENZYME RECONSTITUTION; LIGHT SCATTERING; LIPOPHILICITY; NONHUMAN; PRIORITY JOURNAL; PROTEIN INTERACTION; PROTEOLIPOSOME; RHODOBACTER SPHAEROIDES; THERMODYNAMICS;

BINDING SITES; KINETICS; LIGHT; LIPOSOMES; MICELLES; MODELS, BIOLOGICAL; MODELS, CHEMICAL; PHOTOSYNTHETIC REACTION CENTER COMPLEX PROTEINS; PROTEIN SUBUNITS; QUINONES; RHODOBACTER SPHAEROIDES; THERMODYNAMICS;

BACTERIA (MICROORGANISMS); PROTEOBACTERIA; RHODOBACTER; RHODOBACTER SPHAEROIDES; RHODOPSEUDOMONAS;

EID: 0344825194     PISSN: 00142956     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1432-1033.2003.03845.x     Document Type: Article

References (52)

1. Collins, M.L.P. & Remsen, C.C. (1991) The purple phototrophic bacteria. In Structure of Phototrophic Prokaryotes (Stolz, J.F., ed.), pp. 49-77. CRC Press, Boca Raton, FL, USA.
2. Oelze, J. & Drews, G. (1972) Membranes of photosynthetic bacteria. Biochim. Biophys. Acta 265, 209-239.
3. Verméglio, A., Joliot, P. & Joliot, A. (1995) Organization of electron transfer components and supercomplexes. In Anoxygenic Photosynthetic Bacteria (Blankenship, R.E., Madigan, T.M. & Bauer, C.E., eds), pp. 279-295. Kluwer Academic Publisher, Dordrecht, Boston, London.
4. Zuber, H. & Cogdell, R.J. (1995) Structure and organization of purple bacterial reaction antennae complexes. In Anoxygenic Photosynthetic Bacteria (Blankenship, R.E., Madigan, T.M. & Bauer, C.E., eds), pp. 315-348. Kluwer Academic Publisher, Dordrecht, Boston, London.
5. 1 ATP synthase-ATPase complex. In Anoxygenic Photosynthetic Bacteria (Blankenship, R.E., Madigan, T.M., & Bauer, C.E., eds), pp. 807-820. Kluwer Academic Publisher, Dordrecht, Boston, London.
6. Freiberg, A. (1995) Coupling of antennaes to reaction centers. In Anoxygenic Photosynthetic Bacteria (Blankenship, R.E., Madigan, T.M., & Bauer, C.E., eds), pp. 385-398. Kluwer Academic Publisher, Dordrecht, Boston, London.
7. Mauzerall, D.C. & Greenbaum, N.L. (1989) The absolute size of a photosynthetic unit. Biochim. Biophys. Acta 974, 119-140.
8. de Grooth, E.G., van Grondelle, R., Romijn, J.C. & Pulles, M.P. (1978) The mechanism of reduction of the ubiquinone pool in photosynthetic bacteria at different redox potentials. Biochim. Biophys. Acta 503, 480-490.
9. Feher, G., Allen, J.P., Okamura, M.Y. & Rees, D.C. (1989) Structure and function of bacterial photosynthetic reaction centres. Nature 339, 111-116.
10. Wraight, C.A. (1977) Electron acceptors of photosynthetic bacterial reaction centers. Direct observation of oscillatory behaviour suggesting two closely equivalent ubiquinones. Biochim. Biophys. Acta 459, 525-531.
11. Okamura, M.Y. & Feher, G. (1995) Proton-coupled electron transfer reactions of QB in reaction centers from photosynthetic bacteria. In Anoxygenic Photosynthetic Bacteria (Blankenship, R.E., Madigan, T.M. & Bauer, C.E., eds), pp. 577-594. Kluwer Academic Publisher, Dordrecht, Boston, London.
12. McPherson, P.H., Okamura, M.Y. & Feher, G. (1990) Electron transfer from the reaction centres of Rb. sphaeroides to the quinone pool: doubly reduced QB leaves the reaction centres. Biochim. Biophys. Acta 1016, 289-292.
13. Venturoli, G., Fernandez-Velasco, J.G., Crofts, A.R. & Melandri, B.A. (1986) Demonstration of a collisional interaction of ubiquinol with the ubiquinol-cytochrome c2 oxidoreductase complex in chromatophores from Rhodobacter sphaeroides. Biochim. Biophys. Acta 851, 340-352.
14. Lancaster, C.R. & Michel, H. (1997) The coupling of light-induced electron transfer and proton uptake as derived from crystal structures of reaction centres from Rhodopseudomonas viridis modified at the binding site of the secondary quinine, QB. Structure 5, 1339-1359.
15. Nagy, L., Fodor, E., Farkas, T., Gedey, S. & Kecskes, A. (1998) Lipids effect the charge stabilisation in wild type and mutant reaction centres of photosynthetic bacteria Rhodobacter sphaeroides. In Photosynthesis: Mechanisms and Effects. Proceedings of the 11th International Congress on Photosynthesis (Garab, G., ed.), pp. 893-896. Kluwer Academic Publishers, Dordrecht, the Netherlands.
16. Shinkarev, V.P. & Wraight, C.A. (1993) Electron and proton transfer in the acceptor quinone complex of reaction centres of phototrophic bacteria. In The Photosynthetic Reaction Center (Deisenhofer, J. & Norris, J.R., eds), pp. 193-255. Academic Press, San Diego, CA, USA.
17. Isaacson, R.A., Lendzian, F., Abresch, E.C., Lubitz, W. & Feher, G. (1995) Electronic structure of Q-A in reaction centers from Rhodobacter sphaeroides. I. Electron paramagnetic-resonance in single crystals. Biophys. J. 69, 311-322.
18. Okamura, M.Y., Isaacson, R.A. & Feher, G. (1975) The primary acceptor in bacterial photosynthesis: the obligatory role of ubiquinone in photoactive reaction centres of Rp. Sphaeroides. Proc. Natl Acad. Sci. USA 72, 3491-3495.
19. Trotta, M., Milano, F., Nagy, L. & Agostiano, A. (2002) Response of membrane protein to the environment: the case of photosynthetic reaction centre. Material Science and Engineering: C 22, 263-267.
20. - states in photosynthetic reaction centres isolated from thermophilic bacterium Chloroflexus aurantiacus. Eur. J. Biochem. 202, 625-634.
21. Kutuzov, M.A., Mamedov, M.D., Semenov, A.Yu., Shinkarev, V.P., Verkhovsky, M.I., Abdulaev, N.G., Drachev, L.A. (1991) Functioning of quinone acceptors in the reaction center of the green photosynthetic bacterium Chloroflexus aurantiacus. FEBS Lett. 289, 179-182.
22. Ford, N.C. Jr (1985) Light Scattering Apparatus. In Dynamic Light Scattering, Applications of Photon Correlation Spectroscopy (Pecora, R., ed), pp. 7-34. Plenum Press, New York, NY, USA.
23. Schurtenberger, P. & Hauser, H. (1984) Characterisation of the size distribution of unilamellar vesicles by gel filtration, quasielastic light scattering and electron microscopy. Biochim. Biophys. Acta 778, 470-480.
24. Palazzo, G., Mallardi, A., Giustini, M., Berti, D. & Venturoli, G. (2000) Cumulant analysis of charge recombination kinetics in bacterial reaction centres reconstituted in liposomes. Biophys. J. 79, 1171-1179.
25. Drews, G. & Golecki, J.R. (1995) Structure, molecular organisation, and biosynthesis of membranes of purple bacteria. In Anoxygenic Photosynthetic Bacteria (Blankenship, R.E., Madigan, T.M., & Bauer, C.E., eds), pp. 231-257. Kluwer Academic Publisher, Dordrecht, Boston, London.
26. Golecki, J.R. & Oelze, J. (1980) Differences in the architecture of cytoplasmic and intracytoplasmic membranes of three chemotrophically and phototrophically grown species of the Rhodospirillaceae. J. Bacterial. 144, 781-788.
27. Saphon, S., Jackson, J.B., Lerbs, V. & Witt, H.T. (1975) The functional unit of electrical events and phosphorylation in chromatophores from Rhodopseudomonas sphaeroides. Biochim. Biophys. Acta 408, 58-66.
28. - Biochim. Biophys. Acta 766, 126-140.
29. 2+. Proc. Natl Acad. Sci. USA 96, 6183-6188.
30. Wraight, C.A. & Stein, R.R. (1983) Bacterial reaction center as a model for PSII. Turnover of the secondary acceptor quinone. In Oxygen Evolving System of Photosynthesis (Inoue, Y., Crofts, A.R., Govindjee, Murata, N., Renger, G. & Satoh, K., eds), pp. 383-392. Academic Press, Tokyo, Japan.
31. Agostiano, A., Catucci, L., Colafemmina, G., Della Monica, M., Palazzo, G., Giustini, M. & Mallardi, A. (1995) Charge recombination of photosynthetic reaction centres in different membrane models. Gazz. Chim. Ital. 125, 615-622.
32. Lagarias, J.C., Reeds, J.A., Wright, M.H. & Wright, P.E. (1998) Convergence properties of the Nelder-Mead simplex method in low dimensions. SIAM J. Optimization 9, 112-147.
33. Roth, M., Lewitt-Bentley, A., Michel, H., Deisenhofer, J., Huber, R. & Oesterhelt, D. (1989) Detergent structure in crystals of a bacterial photosynthetic reaction centre. Nature 340, 656-662.
34. Roth, M., Arnoux, B., Ducruix, A. & Reiss-Husson, F. (1991) Structure of the detergent phase and protein-detergent interactions in crystals of the wild-type (strain Y) Rhodobacter sphaeroides. Biochemistry 30, 9403-9413.
35. Gast, P., Hemelrijk, P.W., Van Gorkom, H.J. & Hoff, A.J. (1996) The association of different detergents with the photosynthetic reaction centre protein from Rhodobacter sphaeroides R26 and the effects on its photochemistry. Eur. J. Biochem. 239, 805-809.
36. Cantor, C.R. & Schimmel, P.R. (1980). Biophysical Chemistry: Techniques for the Study of Biological Structure and Function. W H Freeman & Co., San Francisco, CA, USA.
37. Gupte, S., Wu, E.S., Hoechli, L., Hoechli, M., Jacobson, K., Sowers, A.E. & Hackenbrock, C.R. (1984) Relationship between lateral diffusion, collision frequency, and electron transfer of mitochondrial inner membrane oxidation-reduction components, Proc. Natl Acad. Sci. USA 81, 2606-2610.
38. Hackenbrock, C.R., Gupte, S., Wu, E.S. & Jacobson, K. (1984) Lateral diffusion, collision and efficiency of oxidation-reduction components in mitochondrial electron transport. Biochem. Soc. Trans. 12, 402-403.
39. Fato, R., Battino, M., Degli-Esposti, M., Parenti-Castelli, G. & Lenaz, G. (1986) Determination of partition and lateral diffusion coefficients of ubiquinones by fluorescence quenching of N-(9-anthroyloxy) stearic acids in phospholipid vesicles and mitochondrial membranes. Biochemistry 25, 3378-3390.
40. Lenaz, G., Samori, B., Fato, R., Battino, M., Parenti-Castelli, G. & Domini, I. (1992) Localization and preferred orientations of ubiquinone homologs in model bilayers. Biochem. Cell Biol. 70, 504-514.
41. Blackwell, M.F. & Whitmarsh, J. (1990) Effect of integral membrane proteins on the lateral mobility of plastoquinone of phosphatidylcholine proteoliposomes. Biophys. J. 58, 1259-1271.
42. Blackwell, M.F., Gounaris, K., Zara, S.J. & Barber, J. (1987) A method for estimating lateral diffusion coefficients in membranes from steady-state fluorescence quenching studies. Biophys. J. 51, 735-744.
43. Rajarathnam, K., Hochman, J., Schindler, M. & Ferguson-Miller, S. (1989) Synthesis, location, and lateral mobility of fluorescently labeled ubiquinone 10 in mitochondrial and artificial membranes. Biochemistry 28, 3166-3176.
44. Chazotte, B. & Hackenbrock, C.R. (1991) Lateral diffusion of redox components in the mitochondrial inner membrane is unaffected by inner membrane folding and matrix density. J. Biol. Chem. 266, 5973-5979.
45. Marchal, D., Boireau, W., Lavai, J.M., Moiroux, J. & Bourdillon, C. (1998) Electrochemical measurement of lateral diffusion coefficients of ubiquinones and plastoquinones of various isoprenoid chain lengths incorporated in model bilayers. Biophys. J. 74, 1937-1948.
46. Agostiano, A., Milano, F. & Trotta, M. (1999) Investigation on the detergent role in the function of secondary quinone in bacterial Reaction Centers. Eur. J. Biochem. 262, 358-364.
47. Trotta, M., Feher, G. & Okamura, M.Y. (1992) NMR studies of quinone binding to reaction centres from Rb. Phaeroides. Biophys. J. 61, A101.
48. Stowell, M.H., McPhillips, T.M., Rees, D.C., Soltis, S.M., Abresch, E.C. & Feher, G. (1997) Light-induced structural changes in photosynthetic reaction center: implications for mechanism of electron-proton transfer. Science 276, 812-816.
49. Gerencser, L., Laczko, G. & Maroti, P. (1999) Unbinding of oxidized cytochrome c from photosynthetic reaction center of Rhodobacter sphaeroides is the bottleneck of fast turnover. Biochemistry 38, 16866-16875.
50. Hauska, G. & Hurt, E. (1982) Pool function behaviour and mobility of isoprenoid quinones. In Function of Quinones in Energy Conserving Systems (Trumpower, B.L., ed), pp. 87-110. Academic Press, New York, NY, USA.
51. Shinkarev, V.P. & Wraight, C.A. (1997) The interaction of quinone and detergent with reaction centres of purple bacteria. I. Slow quinone exchange between reaction centre micelles and pure detergent micelles. Biophys. J. 72, 2304-2319.
52. Taly, A., Baciou, L. & Sebban, P. (2002) The DMPC lipid phase transition influences differently the first and the second electron transfer reactions in bacterial reaction centers. FEBS Lett. 532, 91-96.