Molecular cloning and expression of the ARFC3 gene, a component of the replication factor C from the salt-tolerant, dimorphic yeast Arxula adeninivorans LS3

Current Genetics

Volumn 35, Issue 1, 1999, Pages 8-13

  Stoltenburg, Regina ^a   Lösche, Olaf ^a,b   Klappach, Günter ^b   Kunze, Gotthard ^a  

^a LEIBNIZ INSTITUTE OF PLANT GENETICS AND CROP PLANT RESEARCH IPK   (Germany)

^b ANHALT UNIVERSITY OF APPLIED SCIENCES   (Germany)

Author keywords

ARFC3; Arxula adeninivorans; Dimorphism; Osmotolerance; Replication factor C

Indexed keywords

FUNGAL PROTEIN; MESSENGER RNA; REPLICATION FACTOR C; SODIUM CHLORIDE; UNCLASSIFIED DRUG;

ARTICLE; CHROMOSOME 1; DNA REPLICATION; FUNGAL GENETICS; GENE EXPRESSION; INTRON; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OSMOSIS; PRIORITY JOURNAL; TEMPERATURE; YEAST;

AMINO ACID SEQUENCE; BASE SEQUENCE; CLONING, MOLECULAR; DNA REPLICATION; DNA-BINDING PROTEINS; FUNGAL PROTEINS; GENE EXPRESSION REGULATION, FUNGAL; GENES, FUNGAL; HOMEODOMAIN PROTEINS; MOLECULAR SEQUENCE DATA; OSMOLAR CONCENTRATION; PROTO-ONCOGENE PROTEINS C-BCL-2; REPLICATION PROTEIN C; REPRESSOR PROTEINS; RESTRICTION MAPPING; RNA, MESSENGER; SACCHAROMYCES CEREVISIAE PROTEINS; SALTS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; TEMPERATURE;

EID: 0344573778     PISSN: 01728083     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002940050426     Document Type: Article

References (38)

1. Birnboim H, Doly J (1979) A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 7:1513-1523
2. Breathnach J, Chambon A (1981) Organization and expression of eukaryotic split genes coding for proteins. Annu Rev Biochem 50:349-383
3. Burgers PMJ (1991) Saccharomyces cerevisiae replication factor C. II. Formation and activity of complexes with the proliferating cell nuclear antigen and with DNA polymerases δ and ε. J Biol Chem 266:22698-22706
4. Campbell JL (1993) Yeast DNA replication. J Biol Chem 268: 25261-25264
5. Cullmann G, Fien K, Kobayashi R, Stillman B (1995) Characterization of the five replication factor C genes of Saccharomyces cerevisiae. Mol Cell Biol 15:4661-4671
6. Davis E, Larkins BA, Knight RH (1972) Polysomes from peas. An improved method for their isolation in the absence of ribonuclease inhibitors. Plant Physiol 50:581-584
7. Fien K, Stillman B (1992) Identification of replication factor C from Saccharomyces cerevisiae: a component of the leading-strand DNA replication complex. Mol Cell Biol 12:155-163
8. Gary SL, Burgers MJ (1995) Identification of the fifth subunit of Saccharomyces cerevisiae replication factor C. Nucleic Acids Res 23:4986-4991
9. Gerik KJ, Gary SL, Burgers PM (1997) Overproduction and affinity purification of Saccharomyces cerevisiae replication factor C. J Biol Chem 272:1256-1262
10. Gienow U, Kunze G, Schauer F, Bode R, Hofemeister J (1990) The yeast genus Trichosporon sp. LS3: molecular characterization of genomic complexity. Zbl Mikrobiol 145:3-12
11. Gua Z, Sherman F (1995) 3′-end-forming signals of yeast mRNA. Mol Cell Biol 15:5983-5990
12. Gurr SJ, Unkles SE, Kinghorn JR (1987) The structure and organization of nuclear genes of filamentous fungi. In: Kinghorn JR (ed) Gene structure in eukaryotic microbes. IRL Press, Oxford, pp 93-139
13. Hanahan D (1983) Studies on transformation of E. coli with plasmids. J Mol Biol 166:557-580
14. Kunze G, Kunze I (1994) Characterization of Arxula adeninivorans strains from different habitats. Ant van Leeuwenhoek 65:607-614
15. Kunze G, Bode R, Schmidt H, Samsonova IA, Birnbaum D (1987) Identification of a lys2 mutant of Candida maltosa by means of transformation. Curr Genet 11:385-391
16. Lee SH, Hurwitz J (1990) Mechanism of elongation of primed DNA by DNA polymerase δ, proliferating cell nuclear antigen, and activator 1. Proc Natl Acad Sci USA 87:5672-5676
17. Lee SH, Kwong AD, Pan ZQ, Hurwitz J (1991) Studies on the activator 1 protein complex, an accessory factor for proliferating cell nuclear antigen-dependent DNA polymerase δ. J Biol Chem 266:594-602
18. Li X, Burgers PMJ (1994a) Cloning and characterization of the essential Saccharomyces cerevisiae RFC4 gene encoding the 37-kDa subunit of replication factor C. J Biol Chem 269:21880-21884
19. Li X, Burgers PMJ (1994b) Molecular cloning and expression of the Saccharomyces cerevisiae RFC3 gene, an essential component of replication factor C. Proc Natl Acad Sci USA 91:868-872
20. Middelhoven JW, Hoogkamer-Te Niet MC, Kreger van Rij NJW (1984) Trichosporon adeninovorans sp. nov., a yeast species utilizing adenine, xanthine, uric acid, putrescine and primary n-alkylamines as the sole source of carbon, nitrogen and energy. Ant van Leeuwenhoek 50:369-387
21. Middelhoven WJ, de Jonge IM, Winter M (1991) Arxula adeninivorans, a yeast assimilating many nitrogenous and aromatic compounds. Ant van Leeuwenhoek 60:129-137
22. Middelhoven WJ, Coenen A, Kraakman B, Gelpke MDS (1992) Degradation of some phenols and hydroxybenzoates by the imperfect ascomycetous yeasts Candida parapsilosis and Arxula adeninivorans: evidence for an operative gentisate pathway. Ant van Leeuwenhoek 62:181-187
23. O'Donnell M, Onrust R, Dean FB, Chen M, Hurwitz J (1993) Homology in accessory proteins of replicative polymerase -E. coli to humans. Nucleic Acids Res 21:1-3
24. Rose MD, Winston F, Hieter P (1990) Methods in yeast genetics. A laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
25. Rösel H, Kunze G (1995) Cloning and characterization of a TEF gene for elongation factor 1α from the yeast Arxula adeninivorans. Curr Genet 28:360-366
26. Rösel H, Kunze G (1996) Identification of a group-I intron within the 25S rDNA from the yeast Arxula adeninivorans. Yeast 12: 1201-1208
27. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd edn. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
28. Smith CL, Klo S, Cantor CR (1988) Pulsed-field gel electrophoresis and technology of large DNA molecules. In: Davis K (ed) Genome analysis, a practical approach. IRL Press, Oxford, pp 41-72
29. Stoltenburg R, Wartmann T, Kunze I, Kunze G (1995) Reliable method to separate free and membrane-bound polysomes from different yeast species. Bio/Techniques 18:564-568
30. Tag K, Lehmann M, Chan C, Renneberg R, Riedel K, Kunze G (1999) Arxula adeninivorans LS3 as a suitable biosensor for measurements of biodegradable substances in salt water. J Chem Technol Biotechnol (in press)
31. Tsurimoto T, Stillman B (1990) Functions of replication factor C and proliferating cell nuclear antigen: functional similarity of DNA polymerase accessory proteins from human cells and bacteriophage T4. Proc Natl Acad Sci USA 87:1023-1027
32. Tsurimoto T, Stillman B (1991a) Replication factors required for SV40 DNA replication in vitro. I. DNA structure specific recognition of a primer-template junction by eukaryotic DNA polymerases and their accessory factors. J Biol Chem 266:1950-1960
33. Tsurimoto T, Stillman B (1991b) Replication factors required for SV40 DNA replication in vitro. 2. Switching of DNA polymerases α and δ during initiation of leading and lagging strand synthesis. J Biol Chem 266:1961-1968
34. Van der Walt JP, Smith MT, Yamada Y (1990) Arxula gen. nov. (Candidaceae), a new anamorphic, arthroconidial yeast genus. Ant van Leeuwenhoek 57:59-61
35. Verma R, Smiley J, Andrews B, Campbell JL (1992) Regulation of the yeast DNA replication genes through the MluI cell-cycle box is dependent on SWI6. Proc Natl Acad Sci USA 89:9479-9483
36. Wang TS (1991) Eukaryotic DNA polymerases. Annu Rev Biochem 60:513-552
37. Wartmann T, Krüger A, Adler K, Bui MD, Kunze I, Kunze G (1995) Temperature dependent dimorphism of the yeast Arxula adeninivorans LS3. Ant van Leeuwenhoek 68:215-223
38. Yoder BL, Burgers PMJ (1991) Saccharomyces cerevisiae replication factor C I. Purification and characterization of its ATPase activity. J Biol Chem 266:22689-22697