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Volumn 53, Issue 6, 2003, Pages 1791-1799

Soehngenia saccharolytica gen. nov., sp. nov. and Clostridium amygdalinum sp. nov., two novel anaerobic, benzaldehyde-converting bacteria

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; BENZALDEHYDE; BENZOIC ACID; BENZYL ALCOHOL; CARBOHYDRATE; CASEIN; CYSTEINE; POTATO STARCH; RNA 16S; SERINE;

EID: 0344465333     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.02668-0     Document Type: Article
Times cited : (67)

References (47)
  • 1
    • 0018712520 scopus 로고
    • Proposal of neotype strains for seven non-saccharolytic Bacteroides species
    • Cato, E. P., Holdeman, L. V. & Moore, W. E. C. (1979). Proposal of neotype strains for seven non-saccharolytic Bacteroides species. Int J Syst Bacteriol 29, 427-434.
    • (1979) Int. J. Syst. Bacteriol. , vol.29 , pp. 427-434
    • Cato, E.P.1    Holdeman, L.V.2    Moore, W.E.C.3
  • 3
    • 0035201757 scopus 로고    scopus 로고
    • Metabolism of cinnamic acids by some Clostridiales and emendation of the descriptions of Clostridium aerotolerans, Clostridium celerecrescens and Clostridium xylanolyticum
    • Chamkha, M., Garcia, J.-L. & Labat, M. (2001). Metabolism of cinnamic acids by some Clostridiales and emendation of the descriptions of Clostridium aerotolerans, Clostridium celerecrescens and Clostridium xylanolyticum. Int J Syst Evol Microbiol 51, 2105-2111.
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 2105-2111
    • Chamkha, M.1    Garcia, J.-L.2    Labat, M.3
  • 4
    • 0022475548 scopus 로고
    • Reclassification of Bacteroides praeacutus Tissier (Holdeman and Moore) in a new genus, Tissierella, as Tissierella praeacuta comb. nov
    • Collins, M. D. & Shah, H. N. (1986). Reclassification of Bacteroides praeacutus Tissier (Holdeman and Moore) in a new genus, Tissierella, as Tissierella praeacuta comb. nov. Int J Syst Bacteriol 36, 461-463.
    • (1986) Int. J. Syst. Bacteriol. , vol.36 , pp. 461-463
    • Collins, M.D.1    Shah, H.N.2
  • 6
    • 0018181287 scopus 로고
    • A review. Possible sources of ethanol ante- and post-mortem: Its relationship to the biochemistry and microbiology of decomposition
    • Corry, J. E. L. (1978). A review. Possible sources of ethanol ante- and post-mortem: its relationship to the biochemistry and microbiology of decomposition. J Appl Bacteriol 44, 1-56.
    • (1978) J. Appl. Bacteriol. , vol.44 , pp. 1-56
    • Corry, J.E.L.1
  • 7
    • 0014713693 scopus 로고
    • The quantitative measurement of DNA hybridization from renaturation rates
    • De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
    • (1970) Eur. J. Biochem. , vol.12 , pp. 133-142
    • De Ley, J.1    Cattoir, H.2    Reynaerts, A.3
  • 8
    • 0001991903 scopus 로고
    • Determinative methods of light microscopy
    • Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Philips. Washington, DC: American Society for Microbiology
    • Doetsch, R. N. (1981). Determinative methods of light microscopy. In Manual Methods for General Bacteriology, pp. 21-23. Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Philips. Washington, DC: American Society for Microbiology.
    • (1981) Manual Methods for General Bacteriology , pp. 21-23
    • Doetsch, R.N.1
  • 9
    • 0028980846 scopus 로고
    • Phylogenetic evidence that the Gram-negative nonsporulating bacterium Tissierella (Bacteroides) praeacuta is a member of the Clostridium subphylum of the Gram-positive bacteria and description of Tissierella creatinini sp. nov
    • Farrow, J. A. E., Lawson, P. A., Hippe, H., Gauglitz, U. & Collins, M. D. (1995). Phylogenetic evidence that the Gram-negative nonsporulating bacterium Tissierella (Bacteroides) praeacuta is a member of the Clostridium subphylum of the Gram-positive bacteria and description of Tissierella creatinini sp. nov. Int J Syst Bacteriol 45, 436-440.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 436-440
    • Farrow, J.A.E.1    Lawson, P.A.2    Hippe, H.3    Gauglitz, U.4    Collins, M.D.5
  • 10
    • 0345303650 scopus 로고
    • PHYLIP (phylogeny inference package), version 3.5c. Department of Genetics, University of Washington, Seattle, USA
    • Felsenstein, J. (1993). PHYLIP (phylogeny inference package), version 3.5c. Department of Genetics, University of Washington, Seattle, USA.
    • (1993)
    • Felsenstein, J.1
  • 11
    • 0342300413 scopus 로고
    • Anaerober mikrobieller Abbau van Kreatin, Kreatinin und N-Methylhydantoin
    • PhD thesis. Göttingen University, Göttingen, Germany
    • Gauglitz, U. (1988). Anaerober mikrobieller Abbau van Kreatin, Kreatinin und N-Methylhydantoin. PhD thesis. Göttingen University, Göttingen, Germany.
    • (1988)
    • Gauglitz, U.1
  • 12
    • 0343825420 scopus 로고
    • The sporogenous sulfate reducing bacterium Desulfotomaculum guttoideum sp. nov
    • (in Russian)
    • Gogotova, G. I. & Vainstein, M. B. (1983). The sporogenous sulfate reducing bacterium Desulfotomaculum guttoideum sp. nov. Mikrobiologiya 52, 789-793 (in Russian).
    • (1983) Mikrobiologiya , vol.52 , pp. 789-793
    • Gogotova, G.I.1    Vainstein, M.B.2
  • 13
    • 0028125968 scopus 로고
    • Acetogenesis coupled to the oxidation of aromatic aldehyde groups
    • Gößner, A., Daniel, S. L. & Drake, H. L. (1994). Acetogenesis coupled to the oxidation of aromatic aldehyde groups. Arch Microbiol 161, 126-131.
    • (1994) Arch. Microbiol. , vol.161 , pp. 126-131
    • Gößner, A.1    Daniel, S.L.2    Drake, H.L.3
  • 14
    • 0027974901 scopus 로고
    • Screening for reduction of aldehydes and ketones by solventogenic cultures of the strict anaerobe, Clostridium acetobutylicum
    • Green, E. M., Kalil, M. S., Williams, P. & Stephens, G. M. (1994). Screening for reduction of aldehydes and ketones by solventogenic cultures of the strict anaerobe, Clostridium acetobutylicum. Biotechnol Tech 8, 733-738.
    • (1994) Biotechnol. Tech. , vol.8 , pp. 733-738
    • Green, E.M.1    Kalil, M.S.2    Williams, P.3    Stephens, G.M.4
  • 15
    • 0031827264 scopus 로고    scopus 로고
    • Tissierella creatinophila sp. nov., a Gram-positive, anaerobic, nonspore-forming, creatinine-fermenting organism
    • Harms, C., Schleicher, A., Collins, M. D. & Andreesen, J. R. (1998). Tissierella creatinophila sp. nov., a Gram-positive, anaerobic, nonspore-forming, creatinine-fermenting organism. Int J Syst Bacteriol 48, 983-993.
    • (1998) Int. J. Syst. Bacteriol. , vol.48 , pp. 983-993
    • Harms, C.1    Schleicher, A.2    Collins, M.D.3    Andreesen, J.R.4
  • 16
    • 0026514566 scopus 로고
    • Creatinine and N-methylhydantoin degradation in two newly isolated Clostridium species
    • Hermann, M., Knerr, H.-J., Mai, N., Groß, A. & Kaltwasser, H. (1992). Creatinine and N-methylhydantoin degradation in two newly isolated Clostridium species. Arch Microbiol 157, 395-401.
    • (1992) Arch. Microbiol. , vol.157 , pp. 395-401
    • Hermann, M.1    Knerr, H.-J.2    Mai, N.3    Groß, A.4    Kaltwasser, H.5
  • 17
    • 0003535096 scopus 로고
    • (editors) 4th edn, Blacksburg, VA: Virginia Polytechnic Institute and State University
    • Holdeman, L. V., Cato, E. P. & Moore, W. E. (editors) (1977). Anaerobe Laboratory Manual, 4th edn, pp. 1-156. Blacksburg, VA: Virginia Polytechnic Institute and State University.
    • (1977) Anaerobe Laboratory Manual , pp. 1-156
    • Holdeman, L.V.1    Cato, E.P.2    Moore, W.E.3
  • 18
    • 0001832065 scopus 로고
    • Bacterial classification III. Nucleic acids in bacterial classification
    • Edited by N. R. Krieg & J. G. Holt. Baltimore: Williams & Wilkins
    • Johnson, J. L. (1984). Bacterial classification III. Nucleic acids in bacterial classification. In Bergey's Manual of Systematic Bacteriology, vol. 1, pp. 8-11. Edited by N. R. Krieg & J. G. Holt. Baltimore: Williams & Wilkins.
    • (1984) Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 8-11
    • Johnson, J.L.1
  • 19
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Edited by H. N. Munro. New York: Academic Press
    • Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 21
    • 0022349102 scopus 로고
    • Clostridium pfennigii sp. nov. uses methoxyl groups of monobenzenoids and produces butyrate
    • Krumholz, L. R. & Bryant, M. P. (1985). Clostridium pfennigii sp. nov. uses methoxyl groups of monobenzenoids and produces butyrate. Int J Syst Bacteriol 35, 454-456.
    • (1985) Int. J. Syst. Bacteriol. , vol.35 , pp. 454-456
    • Krumholz, L.R.1    Bryant, M.P.2
  • 22
    • 0026717319 scopus 로고
    • Reexamination of the metabolic potentials of the acetogens Clostridium aceticum and Clostridium formicoaceticum: Chemolithoautotrophic and aromatic-dependent growth
    • Lux, M. F. & Drake, H. L. (1992). Reexamination of the metabolic potentials of the acetogens Clostridium aceticum and Clostridium formicoaceticum: chemolithoautotrophic and aromatic-dependent growth. FEMS Microbiol Lett 95, 49-56.
    • (1992) FEMS Microbiol. Lett. , vol.95 , pp. 49-56
    • Lux, M.F.1    Drake, H.L.2
  • 23
    • 0025707266 scopus 로고
    • Biotransformations of aromatic aldehydes by acetogenic bacteria
    • Lux, M. F., Keith, E., Hsu, T. D. & Drake, H. L. (1990). Biotransformations of aromatic aldehydes by acetogenic bacteria. FEMS Microbiol Lett 67, 73-78.
    • (1990) FEMS Microbiol. Lett. , vol.67 , pp. 73-78
    • Lux, M.F.1    Keith, E.2    Hsu, T.D.3    Drake, H.L.4
  • 25
    • 85010439719 scopus 로고
    • A procedure for the isolation of deoxyribonucleic acid from micro-organisms
    • Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3, 208-218.
    • (1961) J. Mol. Biol. , vol.3 , pp. 208-218
    • Marmur, J.1
  • 26
    • 73049166370 scopus 로고
    • Thermal denaturation of deoxyribonucleic acids
    • Marmur, J. & Doty, P. (1961). Thermal denaturation of deoxyribonucleic acids. J Mol Biol 3, 585-594.
    • (1961) J. Mol. Biol. , vol.3 , pp. 585-594
    • Marmur, J.1    Doty, P.2
  • 27
    • 0345303648 scopus 로고
    • Genus II Clostridium Prazmovski 1880
    • 7th edn, Edited by R. S. Breed, E. G. D. Murray & N. R. Smith. Baltimore: Williams & Wilkins
    • McClung, L. S. & McCoy, E. (1957). Genus II Clostridium Prazmovski 1880. In Bergey's Manual of Determinative Bacteriology, 7th edn, pp. 634-693. Edited by R. S. Breed, E. G. D. Murray & N. R. Smith. Baltimore: Williams & Wilkins.
    • (1957) Bergey's Manual of Determinative Bacteriology , pp. 634-693
    • McClung, L.S.1    McCoy, E.2
  • 28
    • 0033031398 scopus 로고    scopus 로고
    • Clostridium methoxybenzovorans sp. nov., a new aromatic o-demethylating homoacetogen from an olive mill wastewater treatment digester
    • Mechichi, T., Labat, M., Patel, B. K. C., Woo, T. H. S., Thomas, P. & Garcia, J.-L. (1999). Clostridium methoxybenzovorans sp. nov., a new aromatic o-demethylating homoacetogen from an olive mill wastewater treatment digester. Int J Syst Bacteriol 49, 1201-1209.
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 1201-1209
    • Mechichi, T.1    Labat, M.2    Patel, B.K.C.3    Woo, T.H.S.4    Thomas, P.5    Garcia, J.-L.6
  • 29
    • 0020035168 scopus 로고
    • Clostridium saccharolyticum sp. nov., a saccharolytic species from sewage sludge
    • Murray, W. D., Khan, A. W. & van den Berg, L. (1982). Clostridium saccharolyticum sp. nov., a saccharolytic species from sewage sludge. Int J Syst Bacteriol 32, 132-135.
    • (1982) Int. J. Syst. Bacteriol. , vol.32 , pp. 132-135
    • Murray, W.D.1    Khan, A.W.2    van den Berg, L.3
  • 30
    • 0014460729 scopus 로고
    • Determination of DNA base composition from melting profiles in dilute buffers
    • Owen, R. J., Hill, R. L. & Lapage, S. P. (1969). Determination of DNA base composition from melting profiles in dilute buffers. Biopolymers 7, 503-516.
    • (1969) Biopolymers , vol.7 , pp. 503-516
    • Owen, R.J.1    Hill, R.L.2    Lapage, S.P.3
  • 31
    • 0024490353 scopus 로고
    • Isolation and characterization of an anaerobic, cellulolytic bacterium, Clostridium celerecrescens sp. nov
    • Palop, M. LL., Valles, S., Piñaga, F. & Flors, A. (1989). Isolation and characterization of an anaerobic, cellulolytic bacterium, Clostridium celerecrescens sp. nov. Int J Syst Bacteriol 39, 68-71.
    • (1989) Int. J. Syst. Bacteriol. , vol.39 , pp. 68-71
    • Palop, M.L.L.1    Valles, S.2    Piñaga, F.3    Flors, A.4
  • 32
    • 0030068721 scopus 로고    scopus 로고
    • Bidirectorial transformation of aromatic aldehydes by Desulfovibrio desulfuricans under nitrate-dissimilating conditions
    • Parekh, M., Drake, H. L. & Daniel, S. L. (1996). Bidirectorial transformation of aromatic aldehydes by Desulfovibrio desulfuricans under nitrate-dissimilating conditions. Lett Appl Microbiol 22, 115-120.
    • (1996) Lett. Appl. Microbiol. , vol.22 , pp. 115-120
    • Parekh, M.1    Drake, H.L.2    Daniel, S.L.3
  • 34
    • 0029799968 scopus 로고    scopus 로고
    • The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: Proposal of Nocardiopsaceae fam. nov
    • Rainey, F. A., Ward-Rainey, N., Kroppenstedt, R. M. & Stackebrandt, E. (1996). The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46, 1088-1092.
    • (1996) Int. J. Syst. Bacteriol. , vol.46 , pp. 1088-1092
    • Rainey, F.A.1    Ward-Rainey, N.2    Kroppenstedt, R.M.3    Stackebrandt, E.4
  • 35
    • 0026020722 scopus 로고
    • Clostridium xylanolyticum sp. nov., an anaerobic xylanolytic bacterium from decayed Pinus patula wood chips
    • Rogers, G. M. & Baecker, A. A. W. (1991). Clostridium xylanolyticum sp. nov., an anaerobic xylanolytic bacterium from decayed Pinus patula wood chips. Int J Syst Bacteriol 41, 140-143.
    • (1991) Int. J. Syst. Bacteriol. , vol.41 , pp. 140-143
    • Rogers, G.M.1    Baecker, A.A.W.2
  • 36
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 37
    • 0029846625 scopus 로고    scopus 로고
    • Clostridium ultunense sp. nov., a mesophilic bacterium oxidizing acetate in syntrophic association with a hydrogenotrophic methanogenic bacterium
    • Schnürer, A., Schink, B. & Svensson, B. H. (1996). Clostridium ultunense sp. nov., a mesophilic bacterium oxidizing acetate in syntrophic association with a hydrogenotrophic methanogenic bacterium. Int J Syst Bacteriol 46, 1145-1152.
    • (1996) Int. J. Syst. Bacteriol. , vol.46 , pp. 1145-1152
    • Schnürer, A.1    Schink, B.2    Svensson, B.H.3
  • 38
    • 0025341501 scopus 로고
    • Demethylation of aromatic compounds by strain B 10 and complete degradation of methoxybenzoate in co-culturc with Desulfosarcina strains
    • Sembring, T. & Winter, J. (1990). Demethylation of aromatic compounds by strain B 10 and complete degradation of methoxybenzoate in co-culturc with Desulfosarcina strains. Appl Microbiol Biotechnol 33, 233-238.
    • (1990) Appl. Microbiol. Biotechnol. , vol.33 , pp. 233-238
    • Sembring, T.1    Winter, J.2
  • 39
    • 84892958936 scopus 로고
    • The isolation of soil bacteria
    • Edited by D. A. Shapton & R. G. Board. London: Academic Press
    • Skinner, F. A. (1971). The isolation of soil bacteria. In Isolation of Anaerobes, pp. 57-78. Edited by D. A. Shapton & R. G. Board. London: Academic Press.
    • (1971) Isolation of Anaerobes , pp. 57-78
    • Skinner, F.A.1
  • 40
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int. J. Syst. Bacteriol. , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 41
    • 0023678966 scopus 로고
    • Clostridium argentinense sp. nov.: A genetically homogeneous group composed of all strains of Clostridium botulinum toxin type G and some nontoxigenic strains previously identified as Clostridium subterminale or Clostridium hastiforme
    • Suen, J. C., Hatheway, C. L., Steigerwalt, A. G. & Brenner, D. J. (1988). Clostridium argentinense sp. nov.: a genetically homogeneous group composed of all strains of Clostridium botulinum toxin type G and some nontoxigenic strains previously identified as Clostridium subterminale or Clostridium hastiforme. Int J Syst Bacteriol 38, 375-381.
    • (1988) Int. J. Syst. Bacteriol. , vol.38 , pp. 375-381
    • Suen, J.C.1    Hatheway, C.L.2    Steigerwalt, A.G.3    Brenner, D.J.4
  • 42
    • 0025894923 scopus 로고
    • Carboxydothermus hydrogenoformans gen. nov., sp. nov., a CO-utilizing thermophilic anaerobic bacterium from hydrothermal environments of Kunashir Island
    • Svetlichny, V. A., Sokolova, T. G., Gerhardt, M., Ringpfeil, M., Kostrikina, N. A. & Zavarzin, G. A. (1991). Carboxydothermus hydrogenoformans gen. nov., sp. nov., a CO-utilizing thermophilic anaerobic bacterium from hydrothermal environments of Kunashir Island. Syst Appl Microbiol 14, 254-260.
    • (1991) Syst. Appl. Microbiol. , vol.14 , pp. 254-260
    • Svetlichny, V.A.1    Sokolova, T.G.2    Gerhardt, M.3    Ringpfeil, M.4    Kostrikina, N.A.5    Zavarzin, G.A.6
  • 43
    • 0344440676 scopus 로고
    • Recherches sur la flore intestinale normale des enfants âgés d'un an à cinq ans
    • Tissier, P. H. (1908). Recherches sur la flore intestinale normale des enfants âgés d'un an à cinq ans. Ann Inst Pasteur 22, 189-208.
    • (1908) Ann. Inst. Pasteur. , vol.22 , pp. 189-208
    • Tissier, P.H.1
  • 44
    • 34250582917 scopus 로고
    • Sulfur metabolism in Thiorhodaceae. 1. Quantitative measurement of growing cells of Chromatium okenii
    • Trüper, H. G. & Schlegel, H. G. (1964). Sulfur metabolism in Thiorhodaceae. 1. Quantitative measurement of growing cells of Chromatium okenii. Antonie van Leeuwenhoek 30, 225-238.
    • (1964) Antonie van Leeuwenhoek , vol.30 , pp. 225-238
    • Trüper, H.G.1    Schlegel, H.G.2
  • 45
    • 0023126955 scopus 로고
    • Clostridium aerotolerans sp. nov., a xylanolytic bacterium from corn stover and from the rumina of sheep fed corn stover
    • van Gylswyk, N. O. & van der Toorn, J. J. T. K. (1987). Clostridium aerotolerans sp. nov., a xylanolytic bacterium from corn stover and from the rumina of sheep fed corn stover. Int J Syst Bacteriol 37, 102-105.
    • (1987) Int. J. Syst. Bacteriol. , vol.37 , pp. 102-105
    • van Gylswyk, N.O.1    van der Toorn, J.J.T.K.2
  • 46
    • 0017601433 scopus 로고
    • Citrate, a specific substrate for the isolation of Clostridium sphenoides
    • Walther, R., Hippe, H. & Gottschalk, G. (1977). Citrate, a specific substrate for the isolation of Clostridium sphenoides. Appl Environ Microbiol 33, 955-962.
    • (1977) Appl. Environ. Microbiol. , vol.33 , pp. 955-962
    • Walther, R.1    Hippe, H.2    Gottschalk, G.3
  • 47
    • 0025288689 scopus 로고
    • Oxidation of benzaldehydes to benzoic acid derivatives by three Desulfovibrio strains
    • Zellner, G., Kneifel, H. & Winter, J. (1990). Oxidation of benzaldehydes to benzoic acid derivatives by three Desulfovibrio strains. Appl Environ Microbiol 56, 2228-2233.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 2228-2233
    • Zellner, G.1    Kneifel, H.2    Winter, J.3


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