Polyadenylation of oop RNA in the regulation of bacteriophage λ development

Gene

Volumn 212, Issue 1, 1998, Pages 57-65

  Wróbel, Borys ^a   Herman Antosiewicz, Anna ^a   Szalewska Pałasz, Agnieszka ^a   Wȩgrzyn, Grzegorz ^a  

^a UNIVERSITY OF GDA SK   (Poland)

Author keywords

cII gene expression; Escherichia coli; pcnB; Phage lysis versus lysogeny decision

Indexed keywords

COMPLEMENTARY RNA; VIRUS RNA;

ARTICLE; BACTERIOPHAGE LAMBDA; GENE EXPRESSION; GENE FUSION; LYSOGENIZATION; NONHUMAN; POLYADENYLATION; PRIORITY JOURNAL; PROMOTER REGION; RNA DEGRADATION; RNA TRANSCRIPTION;

BACTERIAL PROTEINS; BACTERIOPHAGE LAMBDA; BASE SEQUENCE; DNA PRIMERS; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, VIRAL; GENES, BACTERIAL; LYSOGENY; MOLECULAR SEQUENCE DATA; MUTATION; NUCLEIC ACID CONFORMATION; POLYMERASE CHAIN REACTION; POLYNUCLEOTIDE ADENYLYLTRANSFERASE; RNA, ANTISENSE; RNA, MESSENGER; RNA, VIRAL;

BACTERIOPHAGE LAMBDA; ESCHERICHIA COLI; PROKARYOTA; UNIDENTIFIED BACTERIOPHAGE;

EID: 0344333447     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(98)00127-9     Document Type: Article

References (35)

1. Altuvia S., Oppenheim A.B. Translational regulatory signals within the coding region of the bacteriophage λ cIII gene. J. Bacteriol. 167:1986;415-419.
2. Boyd A.C., Sherratt D.J. The CLIP plasmids: versatile cloning vectors based on the bacteriophage λ origin of replication. Gene. 153:1995;57-62.
3. Cao G.-J., Pogliano J., Sarkar N. Identification of the coding region for a second poly(A) polymerase in Escherichia coli. Proc. Natl. Acad. Sci. USA. 93:1996;11580-11585.
4. Cao G.-J., Sarkar N. Identification of the gene for an Escherichia coli poly(A) polymerase. Proc. Natl. Acad. Sci. USA. 89:1992;10380-10384.
5. L promoter at low temperature. Proc. Natl. Acad. Sci. USA. 92:1995;2184-2188.
6. Giladi H., Koby S., Gottesman M.E., Oppenheim A.B. Supercoiling, integration host factor, and a dual promoter system participate in the control of the bacteriophage λ pL promoter. J. Mol. Biol. 224:1992;937-948.
7. Goldberg A.R., Howe M. New mutations in the S cistron of bacteriophage lambda affecting host cell lysis. Virology. 38:1969;200-202.
8. cin promoter by Integrative Host Factor. J. Mol. Biol. 209:1989;55-64.
9. Hayes, S., Szybalski, W., 1975. Role of oop RNA primer in initiation of coliphage lambda DNA replication. In: Goulian, M., Hanawalt, P. (Eds.), DNA Synthesis and its Regulation. Benjamin, Menlo Park, CA, pp. 486-512.
10. Hayes S., Bull H., Tulloch J. The Rex phenotype of altruistic cell death following infection of a λ lysogen by T4rII mutants is suppressed by plasmids expressing OOP RNA. Gene. 189:1997;35-42.
11. Herman A., Wȩgrzyn G. Effect of increased ppGpp concentration on DNA replication of different replicons in Escherichia coli. J. Basic Microbiol. 35:1995;33-39.
12. Ingle C.A., Kushner S.R. Development of an in vitro mRNA decay system of Escherichia coli: poly(A) polymerase I is necessary to trigger degradation. Proc. Natl. Acad. Sci. USA. 93:1996;12926-12931.
13. Jensen K.F. The Escherichia coli 'wild types' W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels. J. Bacteriol. 175:1993;3401-3407.
14. Jingdong L., Parkinson J.S. Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control. J. Bacteriol. 171:1989;1254-1261.
15. Jones M.O., Herskowitz I. Mutants of bacteriophage λ which do not require the cIII gene for efficient lysogenization. Virology. 88:1978;199-212.
16. Krinke L., Mahoney M., Wulff D.L. The role of the OOP antisense RNA in coliphage λ development. Mol. Microbiol. 5:1991;1265-1272.
17. Krinke L., Wulff D.L. OOP RNA, produced from multicopy plasmids, inhibits λ cII gene expression through an RNase III-dependent mechanism. Genes Dev. 1:1987;1005-1013.
18. Krinke L., Wulff D.L. RNase III-dependent hydrolysis of λcII-O gene mRNA mediated by λ OOP antisense RNA. Genes Dev. 4:1990;2223-2233.
19. Kur J., Górska I., Taylor K. Escherichia coli dnaA initiator function is required for replication of plasmids derived from coliphage lambda. J. Mol. Biol. 198:1987;203-210.
20. Lopilato J., Bortner S., Beckwith J. Mutations in a new chromosomal gene of Escherichia coli K-12, pcnB, reduce plasmid copy number of pBR322 and its derivatives. Mol. Gen. Genet. 205:1986;285-290.
21. Masters M., Colloms M.D., Olivier I.R., He L., Macnaughton E.J., Charters Y. The pcnB gene of Escherichia coli, which is required for ColE1 copy number maintenance, is dispensable. J. Bacteriol. 175:1993;4405-4413.
22. Miller, J.H., 1972. Experiments in Molecular Genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
23. Obuchowski M., Giladi H., Koby S., Szalewska-Pałasz A., Wȩgrzyn A., Oppenheim A.B., Thomas M.S., Wȩgrzyn G. Impaired lysogenisation of the Escherichia coli rpoA341 mutant by bacteriophage λ is due to the inability of CII to act as a transcriptional activator. Mol. Gen. Genet. 254:1997;304-311.
24. Obuchowski M., Wȩgrzyn A., Szalewska-Pałasz A., Thomas M.S., Wȩgrzyn G. An RNA polymerase α subunit mutant impairs N-dependent transcriptional antitermination in Escherichia coli. Mol. Microbiol. 23:1997;211-222.
25. Powell B.S., Court D.L., Nakamura Y., Rivas M., Turnbough C.L. Jr. Rapid confirmation of single copy lambda prophage integration by PCR. Nucleic Acids Res. 22:1994;5765-5766.
26. Sambrook, J., Fritsch, E.F., Maniatis, T., 1989. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
27. Sarkar N. Polyadenylation of mRNA in bacteria. Microbiology. 142:1996;3125-3133.
28. Silhavy, T.J., Berman, M.L., Enquist, L.W., 1984. Experiments with Gene Fusions. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
29. Szalewska A., Wȩgrzyn G., Taylor K. Neither absence nor excess of λ O initiator-digesting ClpXP proteaase affects λ plasmid or phage replication in Escherichia coli. Mol. Microbiol. 13:1994;469-474.
30. Taylor, K., Wȩgrzyn, G., 1998. Regulation of bacteriophage λ replication. In: Busby S.J.W., Thomas, C.M., Brown, N.L. (Eds.), Molecular Microbiology. Springer, Berlin, pp. 81-97.
31. Thomas M.S., Glass R.E. Escherichia coli rpoA mutation which impairs transcription of positively regulated systems. Mol. Microbiol. 5:1991;2719-2725.
32. Wȩgrzyn G., Glass R.E., Thomas M.S. Involvement of the Escherichia coli RNA polymerase α subunit in transcriptional activation by bacteriophage lambda CI and CII proteins. Gene. 122:1992;1-7.
33. Wȩgrzyn A., Wȩgrzyn G., Taylor K. Protection of coliphage λO initiator protein from proteolysis in the assembly of the replication complex in vivo. Virology. 207:1995;179-184.
34. Wȩgrzyn G., Wȩgrzyn A., Pankiewicz A., Taylor K. Allele specificity of the Escherichia coli dnaA gene function in the replication of plasmids derived from phage λ Mol. Gen. Genet. 252:1996;580-586.
35. Xu F., Lin-Chao S., Cohen S.N. The Escherichia coli pcnB gene promotes adenylylation of antisense RNA I of ColE-type plasmids in vivo and degradation of RNA I decay intermediates. Proc. Natl. Acad. Sci. USA. 90:1993;6756-6760.